BAC Information

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BAC

Clone NameB6Ng01-134D10
Chromosome6 (Build37)3 (Build37)
Map Location 18,835,452 - 18,835,96877,196,736 - 77,197,761
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-134D10.bB6Ng01-134D10.g
ACCDH934568DH934569
length9951,080
definitionDH934568|Mus musculus domesticus DNA, BAC clone: B6Ng01-134D10, 5' end.DH934569|Mus musculus domesticus DNA, BAC clone: B6Ng01-134D10, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,452 - 18,835,968)(77,196,736 - 77,197,761)
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagagcaagccattgctgtt
ctgttcaggaatttttcccctgtacccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggacataagtgtagatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
cctgtagtaaacctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
gatggtgattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagacttgaagtttttatcata
cagatcttatacttccttaattagagtcacgccgagatattttatatatt
tgtgactattgagaaggtgttgtttccctaatttcttctcagcct
gaattctttagttcaacatcacatttttcaattgggttatttgttttact
gatttgcatttttaaattttcttttacttcttgaactgtttcctagcttc
ttgagttcactatatattttggatgtatgtcctctgacagaagaagagtt
ggtagaaattttttccaattctgtaaggtgcagatttgtctgaataatgg
tgtcctttgctatgaagaagattctcagtttctccaggttccatttatta
actttttaatcttagagcatgtgctaagggtgtgatgttgaggctgtctt
ttcttattccactgagttcaaggttattccccactttcttattcatttga
tgcagggcagtgggccatatgttgaagttctctttttcatttagatttca
acatatgcctgattattagtttgaatatattcacatttttctctttatta
ctcacattagactagcaccatttattgaagatgctctcttttatgattct
taataaaaaatcaggtgtttattgtttaagtgtcctcattgtgcttagct
tttgatgtttgactataattttataggcaggatttctttcattttctttc
actcttctctactatgccttttcctttctttctttctctctctctttctt
tctttctttctctctctctttctttctttctttctttctttctctttctt
tctttccttttctttctttctttctttctttctttctttctttctttctt
tctttcttccttgcatttttgtttgttagttttctaactctctcctattt
aatcttcttaaaattctcaatttgtatttcaggaacaactatttttggaa
aacatccagctataacaattttattttcagtgtctatagacttgtcataa
atcaaaatattcacacatgtataaaatatacatatacatatacaattaag
tattttcaaggataccttcaacactactttattatattcattattttggc
actttcaatagaaactattatggcctgctctaatgtgcccatcattacta
tttcacctaaaaactattttcatttccaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835452_18835968
seq2: B6Ng01-134D10.b_49_566 (reverse)

seq1  ACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATC  50

seq1  CAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTT  100

seq1  GTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCTCCATGTACTA  150
      |||||| |||||||||||| ||||||||| | |||||| ||| |||||||
seq2  GTTATCATGTAGAAGAATGCGAATCGATCTACACTTATGTCCTTGTACTA  150

seq1  AGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTG  200

seq1  AAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCAGAGG  250
      |||||||||||||||||||||||||||||||||||||||||||| | |||
seq2  AAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGTACAGG  250

seq1  GGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTGAGGTAGAGAA  299
      |||||| ||||||||||||||||||||||| ||  |||| || | |||||
seq2  GGAAAAATTCCTGAACAGAACAGCAATGGCTTGCTCTGTAAGATCGAGAA  300

seq1  TCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGAC  349
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGAC  350

seq1  ACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTAC  400

seq1  CTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCA  450

seq1  AGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAAATGGGGCTCA  499
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCA  500

seq1  GAACTGAACAAAGAATTC  517
      ||||||||||||||||||
seq2  GAACTGAACAAAGAATTC  518

seq1: chr3_77196736_77197761
seq2: B6Ng01-134D10.g_122_1145 (reverse)

seq1  TGTGGAAATG-AAATAGTTTTTTAGTGAAATAGTAATTGATGGGCACATT  49
      |||||||||| |||||||||||  |||||||||||| |||||||||||||
seq2  TGTGGAAATGAAAATAGTTTTTAGGTGAAATAGTAA-TGATGGGCACATT  49

seq1  AGAGCAGGCCAT-ATAGTTTCTATTGAAAGTGCCAAAATAATGTAATATT  98
      |||||||||||| |||||||||||||||||||||||||||||| |||| |
seq2  AGAGCAGGCCATAATAGTTTCTATTGAAAGTGCCAAAATAATG-AATA-T  97

seq1  AATAAAGTAGTGTTTGAAGGTATCCTTGAAAATACTTAATTGTATATGTA  148
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AATAAAGTAGTG-TTGAAGGTATCCTTGAAAATACTTAATTGTATATGTA  146

seq1  TATGTATATTTTATACATGTGTGAATATTTTGATTTATGACAAGTCTATA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTATATTTTATACATGTGTGAATATTTTGATTTATGACAAGTCTATA  196

seq1  GACACTGAAAATAAAATTGTTATAGCTGGATGTTTTCCAAAAATAGTTGT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTGAAAATAAAATTGTTATAGCTGGATGTTTTCCAAAAATAGTTGT  246

seq1  TCCTGAAATACAAATTGAGAATTTTAAGAAGATTAAATAGGAGAGAGTTA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGAAATACAAATTGAGAATTTTAAGAAGATTAAATAGGAGAGAGTTA  296

seq1  GAAAACTAACAAACAAAAATGCAAGGAAGAAAGAAAGAAAGAAAGAAAGA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACTAACAAACAAAAATGCAAGGAAGAAAGAAAGAAAGAAAGAAAGA  346

seq1  AAGAAAGAAAGAAAGAAAGAAAGAAAAGGAAAGAAAGAAAGAGAAAGAAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGAAAGAAAGAAAGAAAGAAAAGGAAAGAAAGAAAGAGAAAGAAA  396

seq1  GAAAGAAAGAAAGAAAGAGAGAGAGAAAGAAAGAAAGAAAGAGAGAGAGA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAAAGAAAGAAAGAGAGAGAGAAAGAAAGAAAGAAAGAGAGAGAGA  446

seq1  AAGAAAGAAAGGAAAAGGCATAGTAGAGAAGAGTGAAAGAAAATGAAAGA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGAAAGGAAAAGGCATAGTAGAGAAGAGTGAAAGAAAATGAAAGA  496

seq1  AATCCTGCCTATAAAATTATAGTCAAACATCAAAAGCTAAGCACAATGAG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTGCCTATAAAATTATAGTCAAACATCAAAAGCTAAGCACAATGAG  546

seq1  GACACTTAAACAATAAACACCTGATTTTTTATTAAGAATCATAAAAGAGA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTTAAACAATAAACACCTGATTTTTTATTAAGAATCATAAAAGAGA  596

seq1  GCATCTTCAATAAATGGTGCTAGTCTAATGTGAGTAATAAAGAGAAAAAT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTTCAATAAATGGTGCTAGTCTAATGTGAGTAATAAAGAGAAAAAT  646

seq1  GTGAATATATTCAAACTAATAATCAGGCATATGTTGAAATCTAAATGAAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATATATTCAAACTAATAATCAGGCATATGTTGAAATCTAAATGAAA  696

seq1  AAGAGAACTTCAACATATGGCCCACTGCCCTGCATCAAATGAATAAGAAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAACTTCAACATATGGCCCACTGCCCTGCATCAAATGAATAAGAAA  746

seq1  GTGGGGAATAACCTTGAACTCAGTGGAATAAGAAAAGACAGCCTCAACAT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGGAATAACCTTGAACTCAGTGGAATAAGAAAAGACAGCCTCAACAT  796

seq1  CACACCCTTAGCACATGCTCTAAGATTAAAAAGTTAATAAATGGAACCTG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACCCTTAGCACATGCTCTAAGATTAAAAAGTTAATAAATGGAACCTG  846

seq1  GAGAAACTGAGAATCTTCTTCATAGCAAAGGACACCATTATTCAGACAAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAACTGAGAATCTTCTTCATAGCAAAGGACACCATTATTCAGACAAA  896

seq1  TCTGCACCTTACAGAATTGGAAAAAATTTCTACCAACTCTTCTTCTGTCA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCACCTTACAGAATTGGAAAAAATTTCTACCAACTCTTCTTCTGTCA  946

seq1  GAGGACATACATCCAAAATATATAGTGAACTCAAGAAGCTAGGAAACAGT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGACATACATCCAAAATATATAGTGAACTCAAGAAGCTAGGAAACAGT  996

seq1  TCAAGAAGTAAAAGAAAATTTAAAAATG  1026
      ||||||||||||||||||||||||||||
seq2  TCAAGAAGTAAAAGAAAATTTAAAAATG  1024