BAC Information

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BAC

Clone NameB6Ng01-134F21
Chromosome3 (Build37)
Map Location 29,065,716 - 29,280,764
singlet/doubletdoublet
Overlap gene6130401L20Rik
Upstream geneTnik, Slc2a2, EG624446, Eif5a2, Rpl22l1, Gm1527
Downstream geneLOC100040676, Evi1, Mds1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-134F21.bB6Ng01-134F21.g
ACCDH934683DH934684
length6951,114
definitionDH934683|Mus musculus domesticus DNA, BAC clone: B6Ng01-134F21, 5' end.DH934684|Mus musculus domesticus DNA, BAC clone: B6Ng01-134F21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(29,065,716 - 29,066,407)(29,279,655 - 29,280,764)
sequence
gaattccttgcaagatgtgtttcatctaagcaccatatattttagagaat
aagaatttctttacctgttctgcattcatgacatttaaatacagaagaat
agtaatgggttacactggggcacctatagcagaatactttccaagtgtta
catgcttcccatctctgagttccatgatagtgcattggaagtctctccct
tctttagaaagatacagtctccgagaggctctgccagagcctgaccagta
cagatgtggatgcacacagtcaaacatccgactgagcgcagggagaagtt
agggaaagaactgaaggagctaaagggatttgcaacccataggaagaaga
ctattaatcaaccaaatcctgcagagctcccaggggttaaaccaccaacc
aaagagtacacatgggagacccatagttccagctggatatgtagcagagg
atggccttctctgttatcactgggaggggagcctctttgtcctgtggagg
ttcgatgagccagggcaggggaatgctaaagcactgagatagaggtgggt
ggacaggtgggggagcactttcatagaggtaggtgtagagaataggggtt
ttgtggaggggaaacggggaatgggaataacgttttgaaaaggtgaacaa
aaaaattaccaataaaaaaagtaaaaaaaaaaatctccacaattc
gaattcaaaacgatgaacaaggtttgtctttctagctttactcagtggac
caagagaatgtgtggaaacatataattaccccacattcaggagcactaaa
aggtcactctgaaagcttaagaaatccaggaggcggtctttaaccctgtg
gctttgaggccttgcaactaggagaccatgatgagatgatgagattcagc
tttctcatctctccctatgaagacagaggcaaatgtgcaatattaagagg
cagttggccggtcagtcatgatcatatggatggtcagaaaacaagcatgc
tcccaatccagaaacgtgcaaagcaaaaaaacctcctgtgctgggagcct
ccaattgcagtaagtaatagctctgcagataatccaagtcaggactgtgc
aggtcaggcttctggctcatgccctccctctgtgacagctccaggcaatt
tcaccatccagctgttctgtttttcaaaactaaagtaattggaattgaac
tacagagcttttctaaaaccctagcaattaacagcacatactcccaaact
gcactgcaatgggaaaatgtccatcaatcaacccagtgaaataacacatt
ttctcaccagatgtgagatttaatatcttcataacactctggatttacca
cttatgaattgtcagccttgcctcgagccctgagaattaatggactacat
ctctgctatgcaaggatggtttacacttgtaaagtatcccaccctctttt
gatgtatggtaccaaaaaacattctttaagatgtcatcagaaaatatact
agatgggaaaatttgtatacgctgtactatgcattctctttgcctagata
aacacagctctccatgtctcagcacaacgcatccctgtagcaggataacc
aattatcagcaccagtaaacatgaaattacagtaagaagatttattcagg
ccttttactttatcatggtcttctatgattctctagacagaatactaaaa
ctactctgctggctaattgtatatggtacatacaaatatccactgttcat
cttcaactaaaaagaggattcaaggagaacatattttctattttgtgttt
cattggctgtccag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_29065716_29066407
seq2: B6Ng01-134F21.b_45_739

seq1  GAATTCCTTGCAAGATGTGTTTCATCTAAGCACCATATATTTTAGAGAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTGCAAGATGTGTTTCATCTAAGCACCATATATTTTAGAGAAT  50

seq1  AAGAATTTCTTTACCTGTTCTGCATTCATGACATTTAAATACAGAAGAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATTTCTTTACCTGTTCTGCATTCATGACATTTAAATACAGAAGAAT  100

seq1  AGTAATGGGTTACACTGGGGCACCTATAGCAGAATACTTTCCAAGTGTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATGGGTTACACTGGGGCACCTATAGCAGAATACTTTCCAAGTGTTA  150

seq1  CATGCTTCCCATCTCTGAGTTCCATGATAGTGCATTGGAAGTCTCTCCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTTCCCATCTCTGAGTTCCATGATAGTGCATTGGAAGTCTCTCCCT  200

seq1  TCTTTAGAAAGATACAGTCTCCGAGAGGCTCTGCCAGAGCCTGACCAGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTAGAAAGATACAGTCTCCGAGAGGCTCTGCCAGAGCCTGACCAGTA  250

seq1  CAGATGTGGATGCACACAGTCAAACATCCGACTGAGCGCAGGGAGAAGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGTGGATGCACACAGTCAAACATCCGACTGAGCGCAGGGAGAAGTT  300

seq1  AGGGAAAGAACTGAAGGAGCTAAAGGGATTTGCAACCCATAGGAAGAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAAAGAACTGAAGGAGCTAAAGGGATTTGCAACCCATAGGAAGAAGA  350

seq1  CTATTAATCAACCAAATCCTGCAGAGCTCCCAGGGGTTAAACCACCAACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTAATCAACCAAATCCTGCAGAGCTCCCAGGGGTTAAACCACCAACC  400

seq1  AAAGAGTACACATGGGAGACCCATAGTTCCAGCTGGATATGTAGCAGAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGTACACATGGGAGACCCATAGTTCCAGCTGGATATGTAGCAGAGG  450

seq1  ATGGCCTTCTCTGTTATCACTGGGAGGGGAGCCTCTTTGTCCTGTGGAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCCTTCTCTGTTATCACTGGGAGGGGAGCCTCTTTGTCCTGTGGAGG  500

seq1  TTCGATGAGCCAGGGCAGGGGAATGCTAAAGCACTGAGATAGAGGTGGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGATGAGCCAGGGCAGGGGAATGCTAAAGCACTGAGATAGAGGTGGGT  550

seq1  GGACAGGTGGGGGAGCACTTTCATAGAGGTAGGTGTAGAGAATAGGGGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGGTGGGGGAGCACTTTCATAGAGGTAGGTGTAGAGAATAGGGGTT  600

seq1  TTGTGGAGGGGAAACGGGGAATGGGAATAACATTT--GAAATGTGAATAA  648
      ||||||||||||||||||||||||||||||| |||   ||| ||||| ||
seq2  TTGTGGAGGGGAAACGGGGAATGGGAATAACGTTTTGAAAAGGTGAACAA  650

seq1  ATAAAATTACCAAT-AAAAAAGTAAAAAAAAAAATC-CCACAACTC  692
      | |||||||||||| ||||||||||||||||||||| |||||| ||
seq2  A-AAAATTACCAATAAAAAAAGTAAAAAAAAAAATCTCCACAATTC  695

seq1: chr3_29279655_29280764
seq2: B6Ng01-134F21.g_68_1181 (reverse)

seq1  CTGGACAGCCATTGAA--ACAAAATAG-AAATATGTCTTCTTTGAATTCT  47
      ||||||||||| ||||  ||||||||| ||||||||  || |||||| ||
seq2  CTGGACAGCCAATGAAACACAAAATAGAAAATATGTTCTCCTTGAATCCT  50

seq1  CTTTTTAGTTGAAGATGAACAGT-GATATTTGTATGTACATAATACAATT  96
      ||||||||||||||||||||||| |||||||||||||||   ||||||||
seq2  CTTTTTAGTTGAAGATGAACAGTGGATATTTGTATGTACCATATACAATT  100

seq1  AG-CAGCAGAGTAGTTTTAGTA-TCTGTCTAGAGAATCATAG-AGACCAT  143
      || ||||||||||||||||||| ||||||||||||||||||| |||||||
seq2  AGCCAGCAGAGTAGTTTTAGTATTCTGTCTAGAGAATCATAGAAGACCAT  150

seq1  GATAAAGTAAAAGGCCTGAATTAAATCTTCTTACTGTAATTTCATGTTTA  193
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GATAAAGTAAAAGGCCTGAA-TAAATCTTCTTACTGTAATTTCATGTTTA  199

seq1  CTGGTGCTGATAAATTGGTTATTCCTGCTACAGGGATGCGTTGTGCTGAG  243
      ||||||||||| ||||||||| ||||||||||||||||||||||||||||
seq2  CTGGTGCTGAT-AATTGGTTA-TCCTGCTACAGGGATGCGTTGTGCTGAG  247

seq1  ACATGGAGAGCTGTGTTTATCTAGGCAAAGAGAATGCATAGTACAGCGTA  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGAGAGCTGTGTTTATCTAGGCAAAGAGAATGCATAGTACAGCGTA  297

seq1  TACAAATTTTCCCATCTAGTATATTTTCTGATGACATCTTAAAGAATGTT  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAATTTTCCCATCTAGTATATTTTCTGATGACATCTTAAAGAATGTT  347

seq1  TTTTGGTACCATACATCAAAAGAGGGTGGGATACTTTACAAGTGTAAACC  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGTACCATACATCAAAAGAGGGTGGGATACTTTACAAGTGTAAACC  397

seq1  ATCCTTGCATAGCAGAGATGTAGTCCATTAATTCTCAGGGCTCGAGGCAA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTGCATAGCAGAGATGTAGTCCATTAATTCTCAGGGCTCGAGGCAA  447

seq1  GGCTGACAATTCATAAGTGGTAAATCCAGAGTGTTATGAAGATATTAAAT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGACAATTCATAAGTGGTAAATCCAGAGTGTTATGAAGATATTAAAT  497

seq1  CTCACATCTGGTGAGAAAATGTGTTATTTCACTGGGTTGATTGATGGACA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACATCTGGTGAGAAAATGTGTTATTTCACTGGGTTGATTGATGGACA  547

seq1  TTTTCCCATTGCAGTGCAGTTTGGGAGTATGTGCTGTTAATTGCTAGGGT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCCATTGCAGTGCAGTTTGGGAGTATGTGCTGTTAATTGCTAGGGT  597

seq1  TTTAGAAAAGCTCTGTAGTTCAATTCCAATTACTTTAGTTTTGAAAAACA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGAAAAGCTCTGTAGTTCAATTCCAATTACTTTAGTTTTGAAAAACA  647

seq1  GAACAGCTGGATGGTGAAATTGCCTGGAGCTGTCACAGAGGGAGGGCATG  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAGCTGGATGGTGAAATTGCCTGGAGCTGTCACAGAGGGAGGGCATG  697

seq1  AGCCAGAAGCCTGACCTGCACAGTCCTGACTTGGATTATCTGCAGAGCTA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGAAGCCTGACCTGCACAGTCCTGACTTGGATTATCTGCAGAGCTA  747

seq1  TTACTTACTGCAATTGGAGGCTCCCAGCACAGGAGGTTTTTTTGCTTTGC  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTACTGCAATTGGAGGCTCCCAGCACAGGAGGTTTTTTTGCTTTGC  797

seq1  ACGTTTCTGGATTGGGAGCATGCTTGTTTTCTGACCATCCATATGATCAT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTTTCTGGATTGGGAGCATGCTTGTTTTCTGACCATCCATATGATCAT  847

seq1  GACTGACCGGCCAACTGCCTCTTAATATTGCACATTTGCCTCTGTCTTCA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGACCGGCCAACTGCCTCTTAATATTGCACATTTGCCTCTGTCTTCA  897

seq1  TAGGGAGAGATGAGAAAGCTGAATCTCATCATCTCATCATGGTCTCCTAG  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGAGAGATGAGAAAGCTGAATCTCATCATCTCATCATGGTCTCCTAG  947

seq1  TTGCAAGGCCTCAAAGCCACAGGGTTAAAGACCGCCTCCTGGATTTCTTA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAAGGCCTCAAAGCCACAGGGTTAAAGACCGCCTCCTGGATTTCTTA  997

seq1  AGCTTTCAGAGTGACCTTTTAGTGCTCCTGAATGTGGGGTAATTATATGT  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTCAGAGTGACCTTTTAGTGCTCCTGAATGTGGGGTAATTATATGT  1047

seq1  TTCCACACATTCTCTTGGTCCACTGAGTAAAGCTAGAAAGACAAACCTTG  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACACATTCTCTTGGTCCACTGAGTAAAGCTAGAAAGACAAACCTTG  1097

seq1  TTCATCGTTTTGAATTC  1110
      |||||||||||||||||
seq2  TTCATCGTTTTGAATTC  1114