BAC Information

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BAC

Clone NameB6Ng01-134H09
Chromosome3 (Build37)
Map Location 41,059,224 - 41,059,737
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040882, Intu, Slc25a31, Hspa4l, Plk4, Mfsd8, LOC100039027, LOC100039043, 3110057O12Rik, 1700034I23Rik, Larp2, Pgrmc2
Downstream geneEG666004, Ppia-ps3_337.1, LOC100039115, Phf17, Sclt1, D3Ertd751e, LOC666031
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-134H09.bB6Ng01-134H09.g
ACCDH934752DH934753
length9871,161
definitionDH934752|Mus musculus domesticus DNA, BAC clone: B6Ng01-134H09, 5' end.DH934753|Mus musculus domesticus DNA, BAC clone: B6Ng01-134H09, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgtttagctctgagccccatcttttaagggggttatttgatt
ttctggagtccatcctcttgagttctttatatatattggatattagtccc
ctatctgatttaagataggtaaagatcctttcccaatctgttggtggcct
ttttgtcttattgacctgtcttttgccttgcagaagctttgtagtttcat
gaggtcccatttgtcaatcctcaatcttacagcacaagccattgctgttc
tattcaggaatttttcccctgtgcccatatcttcgaggcttttcctcact
ttctcctctataagtttcagtgtctctggttttatgtgaagttccttgat
ccacttagatttgaccttagtacaaggagataagtatggatcgattcaca
ttcttctacatgacaacaaccagttgtgccagcaccaattgttgaaaatg
ctgtctttcttccactggatggttttagctcccttgtcaaagatcaagtg
accataggtgtgtgggttcatttctgggtcttcaattctattccattggt
ctacttgtctgtctctataccagtaccatgcagtttttatcacaattgct
ctgtagtaaagctttaggtcaggcatggtgattccaccagaggttctttt
atccttgagaagactttttgctatcctaggttttttgttattccagatga
atttgcaaattgctccttctaattcgttgaagaattgagttggaattttg
atggggattgcattgaatctgtagattggttttggcaagatagccatttt
tacattgttgatcctgccaatccatgagcatgggagatctttccatcttc
tgagatcttctttaatttctttcttcagagacttgaagtttttatcatac
agatctttcacctccttagtagagtcacgccaagatatttatattatttg
tgactattgagaggtgttgtttccctaatttctttct
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaagtgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatttggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctactcaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatttgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
gaacccagatgtagctgtctcttgtgagactatgcccggggcctagcaac
acagaagtggatgctcacagtcagctaatggatggatcatagggctccca
tggagagctagagaaagtacccaaggagctaaagggatctgcaccctata
gtggaacacattatgactaccagtacccggagctcttgactctagcttgc
atatatatcaaagatggctagtcgccatcactgaagaagaaggcaatgac
ttgcaacttatatgcctagtacaggaactcatggctaaaaaaggggaata
tgggtggcata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_41059224_41059737
seq2: B6Ng01-134H09.b_46_559 (reverse)

seq1  CCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCA  50
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CCACACACCTATGGTCACTTGATCTTTGACAAGGGAGCTAAAACCATCCA  50

seq1  GTGGAAAAAAGACAGCATTTTCAACAAATGGTGCTGGCACAACTGGTTGT  100
      |||||| |||||||||||||||||||| ||||||||||||||||||||||
seq2  GTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTTGT  100

seq1  TATCATGTAGAAGAATGCGAATTGATCCACTCCTATCTCCTTGTACTAAG  150
      | ||||||||||||||| |||| ||||||  | |||||||||||||||||
seq2  TGTCATGTAGAAGAATGTGAATCGATCCATACTTATCTCCTTGTACTAAG  150

seq1  GTCAAATCTAAGTGGATCAAGGAACGCCACATAAAACCAGAGACACTGAA  200
      |||||||||||||||||||||||||  |||||||||||||||||||||||
seq2  GTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTGAA  200

seq1  ACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGTCACAGGGG  250
      ||||||||||||||||||| |||||||||| |||||||||| ||||||||
seq2  ACTTATAGAGGAGAAAGTGAGGAAAAGCCTCGAAGATATGGGCACAGGGG  250

seq1  AAAAATTCCTGCATAGAACAGCAATGGCTTGTGCTGTAAGATTGAGAATA  300
      ||||||||||| |||||||||||||||||||||||||||||||||| || 
seq2  AAAAATTCCTGAATAGAACAGCAATGGCTTGTGCTGTAAGATTGAGGATT  300

seq1  GACAAATGGGACCTCATGAAACTGCAAAGCTTCTGCAAGGCAAAAGACAC  350
      ||||||||||||||||||||||| ||||||||||||||||||||||||| 
seq2  GACAAATGGGACCTCATGAAACTACAAAGCTTCTGCAAGGCAAAAGACA-  349

seq1  CGTCAATAAGACAAAAAGG-CACCAACAGATTGGGAAAGGATCTTTACCT  399
       |||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GGTCAATAAGACAAAAAGGCCACCAACAGATTGGGAAAGGATCTTTACCT  399

seq1  ATCCTAAATCAGATAGGGGACTAATATCCAATATATATCAAGAACTCAAG  449
      ||| |||||||||||||||||||||||||||||||||| |||||||||||
seq2  ATCTTAAATCAGATAGGGGACTAATATCCAATATATATAAAGAACTCAAG  449

seq1  AAGGTGGATTCCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCAGA  499
      | | |||| ||||||||||||||||||||| |||||| ||||||||||||
seq2  AGGATGGACTCCAGAAAATCAAATAACCCCCTTAAAAGATGGGGCTCAGA  499

seq1  GCTAAACAAAGAATT  514
      |||||||||||||||
seq2  GCTAAACAAAGAATT  514