BAC Information

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BAC

Clone NameB6Ng01-134L13
Chromosome3 (Build37)
Map Location 41,059,187 - 41,059,737
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040882, Intu, Slc25a31, Hspa4l, Plk4, Mfsd8, LOC100039027, LOC100039043, 3110057O12Rik, 1700034I23Rik, Larp2, Pgrmc2
Downstream geneEG666004, Ppia-ps3_337.1, LOC100039115, Phf17, Sclt1, D3Ertd751e, LOC666031
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-134L13.bB6Ng01-134L13.g
ACCDH934947DH934948
length8981,206
definitionDH934947|Mus musculus domesticus DNA, BAC clone: B6Ng01-134L13, 5' end.DH934948|Mus musculus domesticus DNA, BAC clone: B6Ng01-134L13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcagctctgagccccattttttaatggggttatttgatt
ttctggagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttgggataggtaaagatcctttcccaatctgttggtggcct
ttttgtcttattgacggtgtcttttgctttgcagaagctttgcaatttta
tgaggtcccatttatcgattctcgatcttacagcacaagccattgctgtt
ctattcaggaatttttcccctgtacccatgtcttcgaggcttttccctac
tttctcctctataagtttcagtgtctctggttttatgtggagttccttaa
tccacttagatttaaccttagtacaaggagatagaaatggatcaattcgc
attcttctacatgataaccgccagttgtgccagcaccatttgttgaaaat
gctgtcttttttccactggatggttttagctcccttgtcaaagatcaagt
gaccataggtgtgtgggttcatctctgggtcttcaattctgttccattgg
tctacttgtctgtcactataccagtaccatgcagtttttatcacaattgc
tctgtagtacagttttaggtccggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctcggttttttgttattccagatg
aatctgccgattgccctttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttctttagagacttgaagttcttatca
gaattccaggtgaagaaaaacattttctgtaaaatcatagaagaaaactt
cccaaatcttaagagatgcccatgaagatacaaaggcctacagaacacta
agtagacaggatcaggaaaaaacttctcatgacctattatagtttgtctt
agttagggatttattgctgtgaccaaggtaactcttataaaggacagcat
ttaatttgggctagcttgcagagcttcagtccattatcatcatagtagaa
agcatggcagtgttcagacagacatggtgttagaggactggatccaaagg
aagccaggagaggactctctcctgcaggcagccaggaggagggcctctct
tcttacactggaaagagcttaagcaaaggacttcaaagccccacacacac
ccacctctgacagtgatgcacttcctccaacgaggccacaccccttaata
gtgtcacttcccaagggccaagcatagtctaatcaccacacagttaaaac
actaaaagtctagaataaagaaaggtattaaaaactgtaagaagaaagag
tcaggtcacgtgtcaatgtggggccataagaataacatccaactgttcaa
cagaaacttttaaatacagccagaagtatttggagagatataatccacat
gtcgccagattatacattgcaacagaaaatacccataaaacctgtgtttc
ataagtgaaggagaaaaaaagctttccatgataaaaacaggcataaaaaa
aggaatttgtcaccaccaagccagctctacagagggtactgggaggaatt
ctttggaccaaataggaggttaaacacatgcaggaagccacggggaaaaa
caaatgataagaaagaggacaaataccaccaaactgacaaagtgagagaa
acttacatacatctgtcataataatttgggatatttcaaaactttatttt
taatagtgtcttatgtgtgaccgtgtgtatgtgagttcagagacctcgga
ggcatacatggccataggatccccttggagtgagttatgtgtttgcaatc
cgctgatatgatgctgaaaccaaacttcagtactctagaacgaaccgaac
taaaagatagataggaacggtctaagatactgtctatgtacaattaagca
atctctggtcggcctcagaacattcctagtgtcaagatagatgtccacac
ttgggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_41059187_41059737
seq2: B6Ng01-134L13.b_50_601 (reverse)

seq1  AGACCAATGGAATAGAATTGAAGACTCAGAAACGAATCCACACACCTATG  50
      |||||||||||| |||||||||||| |||| | ||| |||||||||||||
seq2  AGACCAATGGAACAGAATTGAAGACCCAGAGATGAACCCACACACCTATG  50

seq1  GTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCAGTGGAAAAAAGAC  100
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GTCACTTGATCTTTGACAAGGGAGCTAAAACCATCCAGTGGAAAAAAGAC  100

seq1  AGCATTTTCAACAAATGGTGCTGGCACAACTGGTTGTTATCATGTAGAAG  150
      |||||||||||||||||||||||||||||||||  |||||||||||||||
seq2  AGCATTTTCAACAAATGGTGCTGGCACAACTGGCGGTTATCATGTAGAAG  150

seq1  AATGCGAATTGATCCACTCCTATCTCCTTGTACTAAGGTCAAATCTAAGT  200
      |||||||||||||||| | |||||||||||||||||||| ||||||||||
seq2  AATGCGAATTGATCCATTTCTATCTCCTTGTACTAAGGTTAAATCTAAGT  200

seq1  GGATCAAGGAACGCCACATAAAACCAGAGACACTGAAACTTATAGAGGAG  250
      |||| ||||||| |||||||||||||||||||||||||||||||||||||
seq2  GGATTAAGGAACTCCACATAAAACCAGAGACACTGAAACTTATAGAGGAG  250

seq1  AAAGTGGGGAAAAGCCTTGAAGATATGGTCACAGGGGAAAAATTCCTGCA  300
      ||||| ||||||||||| ||||| ||||  |||||||||||||||||| |
seq2  AAAGTAGGGAAAAGCCTCGAAGACATGGGTACAGGGGAAAAATTCCTGAA  300

seq1  TAGAACAGCAATGGCTTGTGCTGTAAGATTGAGAATAGACAAATGGGACC  350
      ||||||||||||||||||||||||||||| |||||| || ||||||||||
seq2  TAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAATCGATAAATGGGACC  350

seq1  TCATGAAACTGCAAAGCTTCTGCAAGGCAAAAGACACCGTCAATAAGACA  400
      |||| ||| |||||||||||||||| ||||||||||||||||||||||||
seq2  TCATAAAATTGCAAAGCTTCTGCAAAGCAAAAGACACCGTCAATAAGACA  400

seq1  AAAAGG-CACCAACAGATTGGGAAAGGATCTTTACCTATCCTAAATCAGA  449
      |||||| |||||||||||||||||||||||||||||||||| ||||||||
seq2  AAAAGGCCACCAACAGATTGGGAAAGGATCTTTACCTATCCCAAATCAGA  450

seq1  TAGGGGACTAATATCCAATATATATCAAGAACTCAAGAAGGTGGATTCCA  499
      |||||||||||||||||| |||||| ||||||||||||||||||| ||||
seq2  TAGGGGACTAATATCCAACATATATAAAGAACTCAAGAAGGTGGACTCCA  500

seq1  GAAAATCAAATAACCCCATTAAAAAATGGGGCTCAGAGCTAAACAAAGAA  549
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GAAAATCAAATAACCCCATTAAAAAATGGGGCTCAGAGCTGAACAAAGAA  550

seq1  TT  551
      ||
seq2  TT  552