BAC Information

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BAC

Clone NameB6Ng01-134O21
Chromosome3 (Build37)
Map Location 72,030,110 - 72,174,608
singlet/doubletdoublet
Overlap genenone
Upstream geneEG667377, LOC667385, LOC100041459
Downstream gene2010204N08Rik, Slitrk3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-134O21.bB6Ng01-134O21.g
ACCDH935105DH935106
length455764
definitionDH935105|Mus musculus domesticus DNA, BAC clone: B6Ng01-134O21, 5' end.DH935106|Mus musculus domesticus DNA, BAC clone: B6Ng01-134O21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(72,174,148 - 72,174,608)(72,030,110 - 72,030,873)
sequence
agcaagcccagagacaggcaaggaaattcagaatgagctgaaatgctcaa
agatgatgccattgacaaaaacgacctgtgtcttaagggataaaggtgac
aggatcaaatccacaacctgtagaatatgacaagaatgtgagggagtttc
ataacagagaaagctattaccgcccaaaacaggccctggaaaaagactgg
ggccccctacatttctgaagacagagccttgtggctgggggaagacacca
gacaccagggatgcggccctggctccagcctggctcatccatggaaagtg
tccaccataaataataaaaaatagtaaataataaataataatataataat
gaaatatattatattgcaataatataataataatcaataataaataaata
atcatgggaagtagagggagggagagagaggactgggagggtgataggtg
aatga
gaattccagaaagccagaccaatattaaactgcaattatcttatgtattt
tgacaggaggttgataaagcaatgactgcccaggtagtgtggtaaagctg
gagtaagtaaacttttatctttctgtgctattgtttaggaactagatagg
ggaaaaaacaaaaacaaacagctgatgtattaatttacaacaaacattta
tattaaaattactgtctcaagaaggcatggagaaatgttcatttttgatg
tgaccctcctagtttgctcagttagttatcttatacacaacagggacacc
tgcccagagatggaactgcgcacagtgagaaaattgttaatgttgaccct
ttggattaaaacttcaatatttccgttaaacaccacaaaaattctcttta
aaatctagatattaagaaggtatatttatttttctcttgatgagtcttgt
aaaaactcatattcttagtgttgtaaacagagtgtgatacttgaatactt
atcacatattcagctatgtttgtatctcactgatcaatgtcctctgccag
tactttgtgtccttttaatttgctgttggagtaaatttgctaacatttgc
tagggaatttttgcatctacatctattatataattgactcacaatttgtg
ggacaattctaggttcactagatgactgtgtaaatgagatttctcctgtg
atacaggaatttgaaatgtctgagaactggtttggaacttattggtagga
agtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_72174148_72174608
seq2: B6Ng01-134O21.b_45_505 (reverse)

seq1  TCATTCACCTATCACCCTCCCAGTCCTCTCTCTCCCTCCCTCTACTTCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCACCTATCACCCTCCCAGTCCTCTCTCTCCCTCCCTCTACTTCCC  50

seq1  ATGATTATTTATTTATTATTGATTATTATTATATTATTGCAATATAATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTATTTATTTATTATTGATTATTATTATATTATTGCAATATAATAT  100

seq1  ATTTCATTATTATATTATTATTTATTATTTACTATTTTTTATTATTTATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCATTATTATATTATTATTTATTATTTACTATTTTTTATTATTTATG  150

seq1  GTGGACACTTTCCATGGATGAGCCAGGCTGGAGCCAGGGCCGCATCCCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGACACTTTCCATGGATGAGCCAGGCTGGAGCCAGGGCCGCATCCCTG  200

seq1  GTGTCTGGTGTCTTCCCCCAGCCACAAGGCTCTGTCTTCAGAAATGTAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTGGTGTCTTCCCCCAGCCACAAGGCTCTGTCTTCAGAAATGTAGG  250

seq1  GGGCCCCAGTCTTTTTCCAGGGCCTGTTTTGGGCGGTAATAGCTTTCTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCCCAGTCTTTTTCCAGGGCCTGTTTTGGGCGGTAATAGCTTTCTCT  300

seq1  GTTATGAAACTCCCTCACATTCTTGTCATATTCTACAGGTTGTGGATTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATGAAACTCCCTCACATTCTTGTCATATTCTACAGGTTGTGGATTTG  350

seq1  ATCCTGTCACCTTTATCCCTTAAGACACAGGTCGTTTTTGTCAATGGCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGTCACCTTTATCCCTTAAGACACAGGTCGTTTTTGTCAATGGCAT  400

seq1  CATCTTTGAGCATTTCAGCTCATTCTGAATTTCCTTGCCTGTCTCTGGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTTGAGCATTTCAGCTCATTCTGAATTTCCTTGCCTGTCTCTGGGC  450

seq1  TTGCTGAATTC  461
      |||||||||||
seq2  TTGCTGAATTC  461

seq1: chr3_72030110_72030873
seq2: B6Ng01-134O21.g_68_831

seq1  GAATTCCAGAAAGCCAGACCAATATTAAACTGCAATTATCTTATGTATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGAAAGCCAGACCAATATTAAACTGCAATTATCTTATGTATTT  50

seq1  TGACAGGAGGTTGATAAAGCAATGACTGCCCAGGTAGTGTGGTAAAGCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGGAGGTTGATAAAGCAATGACTGCCCAGGTAGTGTGGTAAAGCTG  100

seq1  GAGTAAGTAAACTTTTATCTTTCTGTGCTATTGTTTAGGAACTAGATAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAAGTAAACTTTTATCTTTCTGTGCTATTGTTTAGGAACTAGATAGG  150

seq1  GGAAAAAACAAAAACAAACAGCTGATGTATTAATTTACAACAAACATTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAAACAAAAACAAACAGCTGATGTATTAATTTACAACAAACATTTA  200

seq1  TATTAAAATTACTGTCTCAAGAAGGCATGGAGAAATGTTCATTTTTGATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAAATTACTGTCTCAAGAAGGCATGGAGAAATGTTCATTTTTGATG  250

seq1  TGACCCTCCTAGTTTGCTCAGTTAGTTATCTTATACACAACAGGGACACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCCTCCTAGTTTGCTCAGTTAGTTATCTTATACACAACAGGGACACC  300

seq1  TGCCCAGAGATGGAACTGCGCACAGTGAGAAAATTGTTAATGTTGACCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCAGAGATGGAACTGCGCACAGTGAGAAAATTGTTAATGTTGACCCT  350

seq1  TTGGATTAAAACTTCAATATTTCCGTTAAACACCACAAAAATTCTCTTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGATTAAAACTTCAATATTTCCGTTAAACACCACAAAAATTCTCTTTA  400

seq1  AAATCTAGATATTAAGAAGGTATATTTATTTTTCTCTTGATGAGTCTTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTAGATATTAAGAAGGTATATTTATTTTTCTCTTGATGAGTCTTGT  450

seq1  AAAAACTCATATTCTTAGTGTTGTAAACAGAGTGTGATACTTGAATACTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACTCATATTCTTAGTGTTGTAAACAGAGTGTGATACTTGAATACTT  500

seq1  ATCACATATTCAGCTATGTTTGTATCTCACTGATCAATGTCCTCTGCCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACATATTCAGCTATGTTTGTATCTCACTGATCAATGTCCTCTGCCAG  550

seq1  TACTTTGTGTCCTTTTAATTTGCTGTTGGAGTAAATTTGCTAACATTTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTGTGTCCTTTTAATTTGCTGTTGGAGTAAATTTGCTAACATTTGC  600

seq1  TAGGGAATTTTTGCATCTACATCTATTATATAATTGACTCACAATTTGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGAATTTTTGCATCTACATCTATTATATAATTGACTCACAATTTGTG  650

seq1  GGACAATTCTAGGTTCACTAGATGACTGTGTAAATGAGATTTCTCCTGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAATTCTAGGTTCACTAGATGACTGTGTAAATGAGATTTCTCCTGTG  700

seq1  ATACAGGAATTTGAAATGTCTGAGAACTGGTTTGGAACTTATTGGTAGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGGAATTTGAAATGTCTGAGAACTGGTTTGGAACTTATTGGTAGGA  750

seq1  AGTGTGTGTGTGTG  764
      ||||||||||||||
seq2  AGTGTGTGTGTGTG  764