BAC Information

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BAC

Clone NameB6Ng01-136I08
Chromosome3 (Build37)
Map Location 41,059,224 - 41,059,737
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040882, Intu, Slc25a31, Hspa4l, Plk4, Mfsd8, LOC100039027, LOC100039043, 3110057O12Rik, 1700034I23Rik, Larp2, Pgrmc2
Downstream geneEG666004, Ppia-ps3_337.1, LOC100039115, Phf17, Sclt1, D3Ertd751e, LOC666031
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-136I08.bB6Ng01-136I08.g
ACCDH936272DH936273
length1,0101,244
definitionDH936272|Mus musculus domesticus DNA, BAC clone: B6Ng01-136I08, 5' end.DH936273|Mus musculus domesticus DNA, BAC clone: B6Ng01-136I08, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcagctctgagccccattttttaatggggttatttgaat
ttctggagtccaccctcttcagttctttatatatattggatattagtccc
ctatctgttttgggataggtaaagattctttcccaatctgttggtggcct
ttttgtcttattgacggtgtcttttgctttgcagaagctttgcaatttta
tgaggtcccatttatcgattctcgatcttacagcacaagccattgctgtt
ctattcaggaatttttcccctgtacccatgtcttcgaggcttttccgtac
tttctcctctataagtttcattgtctctggttttatgtggagttccttaa
tccacttagatttaaccttagtacaaggagatagaaatggatcaattcgc
attcttctacatgataactgccagttgtgcctgcaccatttgttgaaaat
gctgtcttttttctactggatggttttagctcccttttcaaagatcaagt
gaccatagatgtgtgggttcatctctgggtcttcaattctgttccattgg
tctacttgtctgtcgctgtaccagtaccatgcagtttttatcacaattgc
tctgtagtacagttttaggtgaggcatggtgattccaccagaggttcttc
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aatctgccaattgccctttctaattcgttgaagaattgagttggaatttt
gatggggatcgcattgaatctgtagagtgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttctttagagacttgaagttcttatcata
cagatctttcacttccctagttagagtcacgcccaggtattttatattat
ttgtgactatgagcggtgttgtttccctaatttcttctgagcctgttatc
ctttgtgtac
gaattcttgggcaccgctgggttctgcagactttggatacctgggtttgc
aacactggctgcccccctgtaccccctgaccaaggaaagtggagaattta
gatggacatcagaacatcagaaagcctttgaaaatattaagaaggccctg
ctgactgcgtcagctttggcactgccagatctaaccaagcccttcatcct
ctatgttgatgagagggcgggggtggccagaggagttcttactcaggctc
taggaccgtggaagaggccggtggcatatttgtctaaaaagctggaccca
gtggccagcggatggcccacatgtttaaaggccgttgctgcagtagccct
actcgttaaggatgctgacaaattaactctgggacagcaaataactgtgg
tagccccccactctcttgaaagcattatccgtcagcccccagaccgatgg
atgacaaatgcccggatgactcactatcagagtctgctgctgactgaacg
ggtcgtgtttgctccccccgctattctcaaccctgccaccttcctccctg
aaacggatgattcctcacccgttcactgctgtgcagacatccttgcggag
gaaattgggatccgaagtgatctacgtgaccagccgtggccaggtgttcc
aaactggtacacagatggaagcagtttcctagtagaaggtaagaggatgg
caggggcagcggtggtagatggtaagcgagtcgtgtggggctggcagcct
gccagaaggtacgtcagctcaaaaagctgaattaattgccctgacccagg
cccttcgggatgctgaggggcagtccatcaacatttacaccgatagcagg
tatgcttttgctacagcccacgtccacggtgccatctatagacaaagagg
gttgctgacgtcagcaggcaaggacataaaaacaaagaggagattttgag
ccttcttgaggctattcatctgcctgccaagtggccattatacatgtcct
ggacatcaaaaggacacgatgctggtgacaggggaataatatggctgatg
ttaaagctaacaggctgcacctcgccctaagaatctgtcctttaggactc
aacagataagacctttccagaagttgctctgccggaactggaactgtgat
ccgagtttgtgatatcactgtgaaattaacttacggacataggtacctgc
caatctacggcgccacgcaggcgtgacgtatgtgtataatacta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_41059224_41059737
seq2: B6Ng01-136I08.b_44_558 (reverse)

seq1  CCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCA  50
      ||||||| |||||||||||||||||| || ||||||||||||||||||||
seq2  CCACACATCTATGGTCACTTGATCTTTGAAAAGGGAGCTAAAACCATCCA  50

seq1  GTGGAAAAAAGACAGCATTTTCAACAAATGGTGCTGGCACAACTGGTTGT  100
      || ||||||||||||||||||||||||||||||| |||||||||||  ||
seq2  GTAGAAAAAAGACAGCATTTTCAACAAATGGTGCAGGCACAACTGGCAGT  100

seq1  TATCATGTAGAAGAATGCGAATTGATCCACTCCTATCTCCTTGTACTAAG  150
      ||||||||||||||||||||||||||||| | ||||||||||||||||||
seq2  TATCATGTAGAAGAATGCGAATTGATCCATTTCTATCTCCTTGTACTAAG  150

seq1  GTCAAATCTAAGTGGATCAAGGAACGCCACATAAAACCAGAGACACTGAA  200
      || |||||||||||||| ||||||| ||||||||||||||||||| ||||
seq2  GTTAAATCTAAGTGGATTAAGGAACTCCACATAAAACCAGAGACAATGAA  200

seq1  ACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGTCACAGGGG  250
      ||||||||||||||||||  |||||||||| ||||| ||||  |||||||
seq2  ACTTATAGAGGAGAAAGTACGGAAAAGCCTCGAAGACATGGGTACAGGGG  250

seq1  AAAAATTCCTGCATAGAACAGCAATGGCTTGTGCTGTAAGATTGAGAATA  300
      ||||||||||| |||||||||||||||||||||||||||||| |||||| 
seq2  AAAAATTCCTGAATAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAATC  300

seq1  GACAAATGGGACCTCATGAAACTGCAAAGCTTCTGCAAGGCAAAAGACAC  350
      || |||||||||||||| ||| |||||||||||||||| |||||||||||
seq2  GATAAATGGGACCTCATAAAATTGCAAAGCTTCTGCAAAGCAAAAGACAC  350

seq1  CGTCAATAAGACAAAAAGG-CACCAACAGATTGGGAAAGGATCTTTACCT  399
      ||||||||||||||||||| ||||||||||||||||||| ||||||||||
seq2  CGTCAATAAGACAAAAAGGCCACCAACAGATTGGGAAAGAATCTTTACCT  400

seq1  ATCCTAAATCAGATAGGGGACTAATATCCAATATATATCAAGAACTCAAG  449
      |||| ||| ||||||||||||||||||||||||||||| ||||||| |||
seq2  ATCCCAAAACAGATAGGGGACTAATATCCAATATATATAAAGAACTGAAG  450

seq1  AAGGTGGATTCCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCAGA  499
      | |||||| |||||||| ||||||||||||||||||||||||||||||||
seq2  AGGGTGGACTCCAGAAATTCAAATAACCCCATTAAAAAATGGGGCTCAGA  500

seq1  GCTAAACAAAGAATT  514
      ||| |||||||||||
seq2  GCTGAACAAAGAATT  515