BAC Information

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BAC

Clone NameB6Ng01-136J09
Chromosome3 (Build37)
Map Location 15,693,364 - 15,694,390
singlet/doubletsinglet
Overlap genenone
Upstream geneEG545507, Car1, LOC100041785, Car3, Car2, EG634323, LOC100039985, LOC751864, Sirpb1, LOC668101
Downstream geneLOC100038947, LOC622425, LOC664795, LOC381484, Ythdf3, LOC100040034
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-136J09.bB6Ng01-136J09.g
ACCDH936322DH936323
length1,2531,028
definitionDH936322|Mus musculus domesticus DNA, BAC clone: B6Ng01-136J09, 5' end.DH936323|Mus musculus domesticus DNA, BAC clone: B6Ng01-136J09, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccataaattcattggttttaatagctgagtagtactccattgtgt
aaatgtaccacattttctgtatccattcctctgttgagggacatctgggt
tctttccagcttctggatattataaataaggctgctatgaacatggtgga
gcatgtgtccttcttaccagttggaacatcttctaggtatatccccagga
gaggtattgttggaacgttaggtcgtactatgtccaatttactgaggaac
tgccagactgatttccagagtggttgtacaagcttgcaatcccaccaaca
atggaggagtgtttctctttctccacgtccttgccagcatatgcggtcac
ctgaatttttgatcttaccattctgactggagtgaggtagaatctcaagg
ttgttttgatttgcatttccgtaatgattaaggatcttgaacattttttt
caggtgcttctcagccctttggtattcctcacttaagaattctttgctta
gttctataccccatttttaatggggttatttgaatttctggagtccagct
tcttgagctctttgtacagcgacagacaggtagatcaatgaaatacaatt
gaagacccaaaaatgaatccacacagctatggtcacttgatctttgacaa
gggagctaaaaccatccagtggaaaaaaaagacagcattttcaacaaatg
gtgctggcacaactggtggttatcatgtagaaggatgtgaattgatccat
tcttatctccttgtacaaagctcaagtctaagtggatcaaagatctccgc
ataaaactagagacactgaaatttatagaggataaagtggggaaaagcct
cgaagatatgggcactggggaaaattcctaaacagaacaacaatggcttg
tgctgtaacatcaagatttgacaaatgggacctcatgaaattgcaaagct
tctgtaaggcaaagacactgtcaataagacaaaaggccaccacagattgg
gaaagaattttaccaatcctagtcagataggggactaatatcctttgtgt
actgttctttcggatgggttgctttgacatgacttgaatattagtattta
ggtaatcactgtttcctgcgttctctcatgataaccaccctgtgttaata
cttgatcacagaagtaacattattgcgaaccatgggagctgacctggctt
aatgaacttagtcttaacgttctcctgttaaagctaggtagcttgcaacc
ctg
gaattcctccaagaataagatattgtttttgattcactattttcatgggc
agaagcaaccctaaggcatccatttagcctttccaaccataaaagccttt
gaagaaataatatagttttggcctggctaatgtgagccaaagctgtttgc
agaagcttttcccttccccctgctgcttgaggaattctccctgtccctgc
cagtataaacaagcctttccctgccattgtaaatgagttcaagactaccc
agaccctacccgtctgagggcactcactaacagtcaacatgactacaact
gccagagcaagagtagctgctctcaaaaattagccataaaaaatagcaat
ccctggaaccccagcctcagtttgaatttgaagataaaccgacattgatg
acaaagtttctgacacaccaatagctgaccatcaaaagtaaaaaaaaaaa
aaaaaaaaaaaaaaaaaaaaaaaaaaaaaataactgttactttgctagct
aataataataaagttgtgtagcctccccccgccccaaaaaaagagtatta
aaataaactgtactgttagtaatcgggtttgactttctctgtgaggctga
gcaaccccatgcacattggaacaaaaacctcttgccattgcagcaatcta
ttgtcaagctgtgtttctgggggtcatgttctcaacatctgggtccctgg
gggtcataacacctttcactccacaggtcaaggaaccaatgtgagaattc
tgccagcttctaagtatatctatccgtattatacattctgtaactgggaa
aatgaccacagggtaagtttgagtacctatagaactactatgagtaagtc
attggccaaaatgtcatttaatgaccatagatccatacactccttacttt
aactggagggcataatgtttttggggattctccttgggatcacgtcattc
agagcagtatcccatagacccttagaacatctgattattttattttcctc
tggtgtacagtttactttgtaaaagatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_15693364_15694390
seq2: B6Ng01-136J09.g_67_1094

seq1  GAATTCCTCCAAGAATAAGATATTGTTTTTGATTCACTATTTTCATGGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCCAAGAATAAGATATTGTTTTTGATTCACTATTTTCATGGGC  50

seq1  AGAAGCAACCCTAAGGCATCCATTTAGCCTTTCCAACCATAAAAGCCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCAACCCTAAGGCATCCATTTAGCCTTTCCAACCATAAAAGCCTTT  100

seq1  GAAGAAATAATATAGTTTTGGCCTGGCTAATGTGAGCCAAAGCTGTTTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAATAATATAGTTTTGGCCTGGCTAATGTGAGCCAAAGCTGTTTGC  150

seq1  AGAAGCTTTTCCCTTCCCCCTGCTGCTTGAGGAATTCTCCCTGTCCCTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCTTTTCCCTTCCCCCTGCTGCTTGAGGAATTCTCCCTGTCCCTGC  200

seq1  CAGTATAAACAAGCCTTTCCCTGCCATTGTAAATGAGTTCAAGACTACCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTATAAACAAGCCTTTCCCTGCCATTGTAAATGAGTTCAAGACTACCC  250

seq1  AGACCCTACCCGTCTGAGGGCACTCACTAACAGTCAACATGACTACAACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCCTACCCGTCTGAGGGCACTCACTAACAGTCAACATGACTACAACT  300

seq1  GCCAGAGCAAGAGTAGCTGCTCTCAAAAATTAGCCATAAAAAATAGCAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGAGCAAGAGTAGCTGCTCTCAAAAATTAGCCATAAAAAATAGCAAT  350

seq1  CCCTGGAACCCCAGCCTCAGTTTGAATTTGAAGATAAACCGACATTGATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGAACCCCAGCCTCAGTTTGAATTTGAAGATAAACCGACATTGATG  400

seq1  ACAAAGTTTCTGACACACCAATAGCTGACCATCAAAAGTAAAAAAAAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGTTTCTGACACACCAATAGCTGACCATCAAAAGTAAAAAAAAAAA  450

seq1  AAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAACTGTTACTTTGCTAGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAACTGTTACTTTGCTAGCT  500

seq1  AATAATAATAAAGTTGTGTAGCCTCCCCCCGCCCCAAAAAAAGAGTATTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATAATAAAGTTGTGTAGCCTCCCCCCGCCCCAAAAAAAGAGTATTA  550

seq1  AAATAAACTGTACTGTTAGTAATCGGGTTTGACTTTCTCTGTGAGGCTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAACTGTACTGTTAGTAATCGGGTTTGACTTTCTCTGTGAGGCTGA  600

seq1  GCAACCCCATGCACATTGGAACAAAAACCTCTTGCCATTGCAGCAATCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACCCCATGCACATTGGAACAAAAACCTCTTGCCATTGCAGCAATCTA  650

seq1  TTGTCAAGCTGTGTTTCTGGGGGTCATGTTCTCAACATCTGGGTCCCTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCAAGCTGTGTTTCTGGGGGTCATGTTCTCAACATCTGGGTCCCTGG  700

seq1  GGGTCATAACACC-TTCACTCCACAGGTCAAGGAACCAATGTGAGAATTC  749
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GGGTCATAACACCTTTCACTCCACAGGTCAAGGAACCAATGTGAGAATTC  750

seq1  TGCCAGCTTCTAAGTATATCTATCCGTATTATACATTCTGTAACTGGGAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGCTTCTAAGTATATCTATCCGTATTATACATTCTGTAACTGGGAA  800

seq1  AATGACCACAGGGTAAGTTTGAGTACCTATTAGAACTACTATGAGTTAGT  849
      ||||||||||||||||||||||||||||| |||||||||||||||| |||
seq2  AATGACCACAGGGTAAGTTTGAGTACCTA-TAGAACTACTATGAGTAAGT  849

seq1  CATTGGCCAAAATGTCA-TTAATGACCATAGATCCATACAC-CCCTACTT  897
      ||||||||||||||||| ||||||||||||||||||||||| || |||||
seq2  CATTGGCCAAAATGTCATTTAATGACCATAGATCCATACACTCCTTACTT  899

seq1  TAACTGGAGGGCAATAATGTTTTTTGGGGATCTCC-TGGGATCAACGTCA  946
      |||||||||||| ||||||||||| |||  ||||| ||||||| ||||| 
seq2  TAACTGGAGGGC-ATAATGTTTTTGGGGATTCTCCTTGGGATC-ACGTC-  946

seq1  ATTCAGAAGCAGTATCCAATAGACCC-TAGAACATCTGATTA-TTTATTT  994
      |||||| |||||||||| |||||||| ||||||||||||||| |||||||
seq2  ATTCAG-AGCAGTATCCCATAGACCCTTAGAACATCTGATTATTTTATTT  995

seq1  TCCCCTGGTGTACAGTTAACCTTGTAAAAGATC  1027
      ||| ||||||||||||| || ||||||||||||
seq2  TCCTCTGGTGTACAGTTTACTTTGTAAAAGATC  1028