BAC Information

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BAC

Clone NameB6Ng01-136M23
Chromosome3 (Build37)
Map Location 132,498,304 - 132,499,417
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr375-ps1, Dkk2, LOC100039018, EG433653, LOC668857, Scye1, A630047E20Rik
Downstream geneLOC668858, Npnt, Gstcd, Ints12, 9130221D24Rik, Ppa2, E130014J05Rik, EG620205, LOC100039168
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-136M23.g
ACCDH936486
length1,109
definitionDH936486|Mus musculus domesticus DNA, BAC clone: B6Ng01-136M23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctcccttctcttgctgctcatctgtcctctgatcagatggcctg
gtctgatgtaacctctgctactctggctactcacttggaaatttcactca
ttttcctgctctttaacttgatttcctttggacaaacatgcctatctctt
ttgccaagctctcatgcaagataaaaaaggaaaacaaaatagaatggcac
ctacaaaagcctgctttgtgcacacaatgtgggttgaggtgtgcttaccc
atgctgtacaagtgcataccaaaacccggcagtacccacatcagttaggc
taaaaacactagaccttcatccctgctttctacacttctctaacccttca
ccccccaagcctagatctgtcttgcataacagaccttggctggacccccc
cattcttccatctaggactgaactctaattattggagctttgggtcccag
actaaccaaccttaaaggatcccattattcagtactggtttctcaataca
ggctgtcattaatatctactagggtaggctctatcctcacaactgctgtg
tgaagggtggcctcagaaacttattattagtctggcatggacctagatac
tgctacttactaacagcacccagacagttgggctgttgttatccccagcc
cactggagaaccctgaacttccatcaagggtacttctcaatatgtccagc
tgtgttgttctcctgtgaagtgtacaatctccagacttcacctccggtgc
ccagtccctccagcatttgctgatgctgctgaaaggtctgcccatagaag
agggaagaatagaaacatttgcctacttgtgtggttttctgtctcattac
agatcccggtgggggtttgactttgtatcaaactgagagccaaacccagc
agcttcaaagcccttttcttttctctcttacttcaagcaatcacaaatat
tgtgtcatcgtgtagcattttcaccatcaaattggaatttctactcactt
caagagtcagtaatgaaaagatgaatggaagtatgaaagggatgagactg
cctcccacactggtataatcaagaaactcttagccgccctaacagacggc
tcttataat
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_132498304_132499417
seq2: B6Ng01-136M23.g_68_1176

seq1  GAATTCAGTCCTTCTCTTGCGCCTTATCTGTCCTCAGCTCAGCATGCCTG  50
      ||||||   |||||||||||  || |||||||||| | ||||   |||||
seq2  GAATTCCTCCCTTCTCTTGCTGCTCATCTGTCCTCTGATCAGATGGCCTG  50

seq1  GCCTTAGTTAACCTCAAGTACTCTGGCTACTCAAAACGTTCATTTCACTC  100
      | || |  |||||||   |||||||||||||| |   |   |||||||||
seq2  GTCTGATGTAACCTCTGCTACTCTGGCTACTC-ACTTGGAAATTTCACTC  99

seq1  ATTTTCCTGCTCATAGAACTTGATTTCCTTTGGACAAACATGCCTATCTC  150
      |||||||||||| |  ||||||||||||||||||||||||||||||||||
seq2  ATTTTCCTGCTC-TTTAACTTGATTTCCTTTGGACAAACATGCCTATCTC  148

seq1  TTAGTCCAAGCTAAGATGCAAGATAAAAAAGGAAAACAAAATAGAATGGC  200
      ||   |||||||   |||||||||||||||||||||||||||||||||||
seq2  TTTTGCCAAGCTCTCATGCAAGATAAAAAAGGAAAACAAAATAGAATGGC  198

seq1  ACCTACAAAAGCCTGCTTTGTGCACACAGTATGGTTTGAGGTGTGCTTAC  250
      |||||||||||||||||||||||||||| | ||| |||||||||||||||
seq2  ACCTACAAAAGCCTGCTTTGTGCACACAATGTGGGTTGAGGTGTGCTTAC  248

seq1  CCAAGCTGTAGAAGTGCATACCAGTACCCGGGAGTACCCACAAGAGTTAG  300
      ||| |||||| ||||||||||||  |||||| ||||||||||  ||||||
seq2  CCATGCTGTACAAGTGCATACCAAAACCCGGCAGTACCCACATCAGTTAG  298

seq1  GCTAAAAACACAAGACCTTCATCCATGCAGTCTAAACTTCTCTAAACCTT  350
      ||||||||||| |||||||||||| |||  |||| |||||||||| ||||
seq2  GCTAAAAACACTAGACCTTCATCCCTGCTTTCTACACTTCTCTAACCCTT  348

seq1  CTCCCAGCATGTCTAGATCTGTCTTGCATAACAGACCTTGGCTGTACAGC  400
      | |||  || | |||||||||||||||||||||||||||||||| ||  |
seq2  CACCCCCCAAGCCTAGATCTGTCTTGCATAACAGACCTTGGCTGGACCCC  398

seq1  CCCATTCTTCCATCTAGGACTGTACTCTAAGTATTGGAGCTTTGGGTCCC  450
      |||||||||||||||||||||| ||||||| |||||||||||||||||||
seq2  CCCATTCTTCCATCTAGGACTGAACTCTAATTATTGGAGCTTTGGGTCCC  448

seq1  AGACTAACCAACCTTAATGGATCCCATTATTCAGTACTGGTTTCTCAATA  500
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AGACTAACCAACCTTAAAGGATCCCATTATTCAGTACTGGTTTCTCAATA  498

seq1  CTGGCTGTCATTGGCATTAGCTAGGGTAGGCTCTAAGCAAACAACTGCTG  550
      | ||||||||||   ||   |||||||||||||||  |  ||||||||||
seq2  CAGGCTGTCATTAATATCTACTAGGGTAGGCTCTATCCTCACAACTGCTG  548

seq1  T-TGAAGTTCAGCCTCAGAAACTTATTATTAGTCTGGCATGGACCTAGAT  599
      | |||||    |||||||||||||||||||||||||||||||||||||||
seq2  TGTGAAGGGTGGCCTCAGAAACTTATTATTAGTCTGGCATGGACCTAGAT  598

seq1  ACTGCTACTTACTAACAGCACCCAGACAGTTGGGCTGTTGTTATCCCCAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTACTTACTAACAGCACCCAGACAGTTGGGCTGTTGTTATCCCCAG  648

seq1  CCCACTGGAGAACCCTGAACTTCCATCAAGGGTACTTCTCAATATGTCCA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTGGAGAACCCTGAACTTCCATCAAGGGTACTTCTCAATATGTCCA  698

seq1  GCTGTGTTGTTCTCCTGTGAAGTGTACAATCTCCAGACTTCACCTCCGGT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGTTGTTCTCCTGTGAAGTGTACAATCTCCAGACTTCACCTCCGGT  748

seq1  GCCCAGTCCCTCCAGCATTTGCTGATGCTGCTG-AAGGTCTGCCCATAGA  798
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GCCCAGTCCCTCCAGCATTTGCTGATGCTGCTGAAAGGTCTGCCCATAGA  798

seq1  AGAGGGAAGAATAGAAACATTTGCCTACTTGTGTGGTTTTTCTGTCTCAT  848
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AGAGGGAAGAATAGAAACATTTGCCTACTTGTGTGG-TTTTCTGTCTCAT  847

seq1  TACAGATCCCGGTGGGGGTTTGACTTTGTATCAAACTGAGAGCCAAACCC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGATCCCGGTGGGGGTTTGACTTTGTATCAAACTGAGAGCCAAACCC  897

seq1  AGCAGCTTCAAAGCCC-TTTCTTTTCTCTCTTACCTCAAGCAATCACCAA  947
      |||||||||||||||| ||||||||||||||||| ||||||||||||  |
seq2  AGCAGCTTCAAAGCCCTTTTCTTTTCTCTCTTACTTCAAGCAATCAC--A  945

seq1  AATATTGTGTCATCGGTGTAGCAATTTTCACCATCAAATTTGAATTCCTA  997
      |||||||||||||| ||||||| ||||||||||||||||| ||||| |||
seq2  AATATTGTGTCATC-GTGTAGC-ATTTTCACCATCAAATTGGAATTTCTA  993

seq1  CTCACTTCAGGAGTCAGTAATG-AAAGAGTGATGG-AGTATGAAGGGGGA  1045
      ||||||||| |||||||||||| |||||   |||| ||||||||  ||||
seq2  CTCACTTCAAGAGTCAGTAATGAAAAGATGAATGGAAGTATGAA-AGGGA  1042

seq1  TGAGACAGCTTCCCCAACACCTGTTAAATCCAGAAACTCTTAAGCGCCCT  1095
      |||||| || ||||  ||||  ||  |||| |||||||||||  ||||||
seq2  TGAGACTGCCTCCC--ACACTGGTATAATCAAGAAACTCTTAGCCGCCCT  1090

seq1  AAACAACTGCTCTTATAAT  1114
      ||   || |||||||||||
seq2  AACAGACGGCTCTTATAAT  1109