BAC Information

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BAC

Clone NameB6Ng01-136N03
Chromosome3 (Build37)
Map Location 41,058,971 - 41,059,737
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040882, Intu, Slc25a31, Hspa4l, Plk4, Mfsd8, LOC100039027, LOC100039043, 3110057O12Rik, 1700034I23Rik, Larp2, Pgrmc2
Downstream geneEG666004, Ppia-ps3_337.1, LOC100039115, Phf17, Sclt1, D3Ertd751e, LOC666031
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-136N03.bB6Ng01-136N03.g
ACCDH936493DH936494
length9721,162
definitionDH936493|Mus musculus domesticus DNA, BAC clone: B6Ng01-136N03, 5' end.DH936494|Mus musculus domesticus DNA, BAC clone: B6Ng01-136N03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcagctctgagccccatattttaatggatttatttgatt
ttctggagtccaccttcttgagttctttatatatattggatattagtccc
ctatccgatttgggataggtaaaggtcatttcccaatctgttggtggcct
ttttgtcttattgacggtgtcttttgctttgcagaagctttgtaatttta
tgaggtcccatttatcgattcttgatcttacagcacaagccattgctgtt
ctattcaggaatttttcccctgtacccatatcttcgaggcttttccctac
tttctcctctataagtttcaatgtctctggttttatgtggagttccttaa
tccacttagatttgaccttagtaaaaggagatagaaatggatcaattcgc
attcttctacatgataaccgccagttgtgccagcaccatttgttgaaatt
gctgtcttttttccactggatggttttagctcccttgtcaaagatcaagt
gaccataggtgtgtggattcatctctgggtcttcaattctgctccattgg
tctacttgtctgtcactaaaccagtaccatgcagttttgatcacaattgc
tctgtagtacagttttaggtccggcatggtgattccaccagaggttcttt
tattcttgagaagagtttttgctatcctcggttttttgttattccagatg
aatctgccgattgccctttctaattcgttgaagaattgaattggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgacaatccatgagcatgggagatctttccatctt
ctgagatctttaatttctttttttagagacttgaagttcttatcatacag
atctttctttttttttatgtttttttttctttccattttttattaggtat
ttagctcatttacatttcgatg
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcatggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactactggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtagatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatacccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagacga
aaggatggaccatgtagagactgcaatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactattgccggggcctagcaac
acaaagtggatgctcacagtcagcttatggatggatcacagtgctccaat
gaggagctagaaaagtacccaagagctaaagggatctgcacccttatagg
ttgaacacattatgactaaccagtacccgggagctcttgatcttgctgca
ttgttatcaaagaatggccattagccctttcttgtaaagaaaggtcattg
aacaccaaccttattgcccatacagggaaacgcctatcccaaaaaggtga
gttgtgcggtat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_41058971_41059737
seq2: B6Ng01-136N03.b_48_815 (reverse)

seq1  ATTCAATGCAATCCCCATCAAAATTCCAACTCAATTCTTCAACGAATTTG  50
      ||||||||||||||||||||||||||||| |||||||||||||||||| |
seq2  ATTCAATGCAATCCCCATCAAAATTCCAATTCAATTCTTCAACGAATTAG  50

seq1  AAAGAGCAATCTGCAAATTCATCTGGAATAACAAAAAACCTAGGATAGCA  100
      |||| |||||| ||| |||||||||||||||||||||||| |||||||||
seq2  AAAGGGCAATCGGCAGATTCATCTGGAATAACAAAAAACCGAGGATAGCA  100

seq1  AAAACTCTTCTCAAGGATAACAGAACCTCTGGTGGAATCACCATGCCTGA  150
      ||||||||||||||| |||| |||||||||||||||||||||||||| ||
seq2  AAAACTCTTCTCAAGAATAAAAGAACCTCTGGTGGAATCACCATGCCGGA  150

seq1  CCTAAAGCTTTACTACAGAGCAATTGTGATAAAAACTGCATGGTACTGGT  200
      |||||| || |||||||||||||||||||| |||||||||||||||||||
seq2  CCTAAAACTGTACTACAGAGCAATTGTGATCAAAACTGCATGGTACTGGT  200

seq1  ATAGTGACAGACAAGCAGACCAATGGAATAGAATTGAAGACTCAGAAACG  250
       |||||||||||||| |||||||||||  |||||||||||| |||| | |
seq2  TTAGTGACAGACAAGTAGACCAATGGAGCAGAATTGAAGACCCAGAGATG  250

seq1  AATCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCAT  300
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  AATCCACACACCTATGGTCACTTGATCTTTGACAAGGGAGCTAAAACCAT  300

seq1  CCAGTGGAAAAAAGACAGCATTTTCAACAAATGGTGCTGGCACAACTGGT  350
      |||||||||||||||||||| |||||||||||||||||||||||||||| 
seq2  CCAGTGGAAAAAAGACAGCAATTTCAACAAATGGTGCTGGCACAACTGGC  350

seq1  TGTTATCATGTAGAAGAATGCGAATTGATCCACTCCTATCTCCTTGTACT  400
       ||||||||||||||||||||||||||||||| | |||||||||| ||||
seq2  GGTTATCATGTAGAAGAATGCGAATTGATCCATTTCTATCTCCTTTTACT  400

seq1  AAGGTCAAATCTAAGTGGATCAAGGAACGCCACATAAAACCAGAGACACT  450
      |||||||||||||||||||| ||||||| ||||||||||||||||||| |
seq2  AAGGTCAAATCTAAGTGGATTAAGGAACTCCACATAAAACCAGAGACATT  450

seq1  GAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGTCACAG  500
      ||||||||||||||||||||| ||||||||||| ||||||||||  ||||
seq2  GAAACTTATAGAGGAGAAAGTAGGGAAAAGCCTCGAAGATATGGGTACAG  500

seq1  GGGAAAAATTCCTGCATAGAACAGCAATGGCTTGTGCTGTAAGATTGAGA  550
      |||||||||||||| ||||||||||||||||||||||||||||||  |||
seq2  GGGAAAAATTCCTGAATAGAACAGCAATGGCTTGTGCTGTAAGATCAAGA  550

seq1  ATAGACAAATGGGACCTCATGAAACTGCAAAGCTTCTGCAAGGCAAAAGA  600
      || || |||||||||||||| ||| | |||||||||||||| ||||||||
seq2  ATCGATAAATGGGACCTCATAAAATTACAAAGCTTCTGCAAAGCAAAAGA  600

seq1  CACCGTCAATAAGACAAAAAGG-CACCAACAGATTGGGAAAGGATCTTTA  649
      |||||||||||||||||||||| |||||||||||||||||| || |||||
seq2  CACCGTCAATAAGACAAAAAGGCCACCAACAGATTGGGAAATGACCTTTA  650

seq1  CCTATCCTAAATCAGATAGGGGACTAATATCCAATATATATCAAGAACTC  699
      ||||||| ||||| ||||||||||||||||||||||||||| ||||||||
seq2  CCTATCCCAAATCGGATAGGGGACTAATATCCAATATATATAAAGAACTC  700

seq1  AAGAAGGTGGATTCCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTC  749
      ||||||||||| |||||||||||||||||  ||||||||| |||||||||
seq2  AAGAAGGTGGACTCCAGAAAATCAAATAAATCCATTAAAATATGGGGCTC  750

seq1  AGAGCTAAACAAAGAATT  767
      |||||| |||||||||||
seq2  AGAGCTGAACAAAGAATT  768