BAC Information

Click to search

BAC

Clone NameB6Ng01-137F14
Chromosome3 (Build37)
Map Location 62,042,192 - 62,043,354
singlet/doubletsinglet
Overlap genenone
Upstream geneRap2b, LOC666891, LOC669910, LOC676965
Downstream gene4631416L12Rik, Dhx36, Gpr149, LOC676984, LOC666967
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-137F14.bB6Ng01-137F14.g
ACCDH936889DH936890
length1,1441,140
definitionDH936889|Mus musculus domesticus DNA, BAC clone: B6Ng01-137F14, 5' end.DH936890|Mus musculus domesticus DNA, BAC clone: B6Ng01-137F14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccatgatcgtgagcccactgtcgtacttctctggctgtgaaataa
gttccttggtcagaagcaatactgtgtggaataccatgacgatagatgag
gcattctgtcagtccgtgaatggtggttttagcagaggcattacgtgcag
gaaaggcaaatccataaccagaataagtatctactccagtaagaacaaaa
cgctgtcctttccacgaaggaagtggtccaatgtagtcaacctgccacca
ggttgctggctggtcacctcgaggaatggtgccatatctggggctcagtg
ttggtttctgctgttggcagatctggcaatcagcagcagctgtagccagg
tcagccttggtgagtggaagcccatgttgctgagcccaagcataacctcc
atctcgaccaccatggccactttgttcatgtgcccattgagcaatgacag
ggatggctggggagagaggctgattgtccacagaacgggtcatcttatcc
acttgattattgaactcctcctcagctgaagtcaccttttggtgagcatt
tacatgggacacaaatatcttcacatcctttgcccatttggagagatcta
tccacatactttcttccccagatgtctttctcaccaatttgcgtcttata
gagctggtgaaaggcatatcttctggaccttcccaatgttggacaattat
gctttacacaatatatccactctagcattgcaatttccctaagtcttaaa
atcccttcatcaacactaagccacggaattatcaggcatcttcaagtcat
ttccagtaagccatcttttgattaaacaccctcagcccaaccattcaaac
aaacttttgacacctttttttaattatgcgagcttccgtataaacctgaa
atcctctactcgaggaccatgtcaataaactccagcctgctctagtttat
gttccttccactcttatctcacaccctaaaatcattcccacccttttcac
caggttctgctgaagaaataacaaactcttaagctcctttgatggtaggt
attgcctattgaactatactttctactccccctctggagactgtttgctt
tagcctggataaggttcgtagaaaaaactattggttgggcggag
gaattcaatcaccaaaatacatacatatggcaagaggagagaacagactt
cgacaagatgtcttctgacctccacacaaccctctccaaataaacaaaca
caacaaaaaagccaaaggtggacagagaagtgcttctctgtaaaaagaaa
tctagaaaatatgtaatagaaggattttcataaaaatatgaagccttcat
tttacttgtcgctgctcctaatttaggttaggacgtttccaggtacaaag
aacacaaaatcaattccaataggaggtaaaaagtcaatatgtaaatttat
gaaagtatgataaaaagaaatggtaccaatattaagcataaataatggcc
atcaaggtctgtgcacaggtatgagtcatttgtcatctgaggatatgact
tgttctctcttagaagcggaatctagatacacaatgtggagggcagttgc
cagtgacttggattcatagccttctactcaggagaccattgaaataagaa
aaatttccactctataccaacagaaatggcctaagaaaactaatttacta
ggtgatatcattcaactagctctgaatcaatgtgatcgaggaccttagga
gccagtgaaaagaaaaatatcaacaacaacaaaaaaaagccatgtacttg
aatgtacatgaactttcatttttctcttaatatttttattatttaaatgc
attttatagatcaaacatattaataatattgagtattttgagaatcaaat
aatatgtaaaaatttgtgcaacttttatatttcatatcctttcatacact
aaaaatatcattaatgaatattttaatactatccataactgaggatccta
taactaaatgtttaatactaaattgtttcaaaacatacaaatattaattt
gataattaagcatagtaaaaaagcataaattataaaattaattataagaa
atatattcaaaagtccttatatgataccaactgatacagtgggaggagta
tttaaaacacatataattaagtggtgatattctacaacaggttgctaaaa
agaatatcagtgttccagaaggaaatatttatcatggacttatttaattt
caaatagcaaactcttggagttacattagaaaatgctaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_62042192_62043354
seq2: B6Ng01-137F14.g_70_1209

seq1  GAATTCAATCACCAAAATACATACATATGGCAAGAGGAGAGAACAGACTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATCACCAAAATACATACATATGGCAAGAGGAGAGAACAGACTT  50

seq1  CGACAAGATGTCTTCTGACCTCCACACAACCCTCTCCAAATAAACAAACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGACAAGATGTCTTCTGACCTCCACACAACCCTCTCCAAATAAACAAACA  100

seq1  CAACAAAAAAGCCAAAGGTGGACAGAGAAGTGCTTCTCTGTAAAAAGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAAAAAAGCCAAAGGTGGACAGAGAAGTGCTTCTCTGTAAAAAGAAA  150

seq1  TCTAGAAAATATGTAATAGAAGGATTTTCATAAAAATATGAAGCCTTCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGAAAATATGTAATAGAAGGATTTTCATAAAAATATGAAGCCTTCAT  200

seq1  TTTACTTGTCGCTGCTCCTAATTTAGGTTAGGACGTTTCCAGGTACAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTTGTCGCTGCTCCTAATTTAGGTTAGGACGTTTCCAGGTACAAAG  250

seq1  AACACAAAATCAATTCCAATAGGAGGTAAAAAGTCAATATGTAAATTTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAAAATCAATTCCAATAGGAGGTAAAAAGTCAATATGTAAATTTAT  300

seq1  GAAAGTATGATAAAAAGAAATGGTACCAATATTAAGCATAAATAATGGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTATGATAAAAAGAAATGGTACCAATATTAAGCATAAATAATGGCC  350

seq1  ATCAAGGTCTGTGCACAGGTATGAGTCATTTGTCATCTGAGGATATGACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGGTCTGTGCACAGGTATGAGTCATTTGTCATCTGAGGATATGACT  400

seq1  TGTTCTCTCTTAGAAGCGGAATCTAGATACACAATGTGGAGGGCAGTTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTCTCTTAGAAGCGGAATCTAGATACACAATGTGGAGGGCAGTTGC  450

seq1  CAGTGACTTGGATTCATAGCCTTCTACTCAGGAGACCATTGAAATAAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGACTTGGATTCATAGCCTTCTACTCAGGAGACCATTGAAATAAGAA  500

seq1  AAATTTCCACTCTATACCAACAGAAATGGCCTAAGAAAACTAATTTACTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTCCACTCTATACCAACAGAAATGGCCTAAGAAAACTAATTTACTA  550

seq1  GGTGATATCATTCAACTAGCTCTGAATCAATGTGATCGAGGACCTTAGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGATATCATTCAACTAGCTCTGAATCAATGTGATCGAGGACCTTAGGA  600

seq1  GCCAGTGAAAAGAAAAATATCAACAACAACAAAAAAAAGCCATGTACTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGTGAAAAGAAAAATATCAACAACAACAAAAAAAAGCCATGTACTTG  650

seq1  AATGTACATGAACTTTCATTTTTCTCTTAATATTTTTATTATTTAAATGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTACATGAACTTTCATTTTTCTCTTAATATTTTTATTATTTAAATGC  700

seq1  ATTTTATAGATCAAACATATTAATAATATTGAGTATTTTGAGAATCAAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATAGATCAAACATATTAATAATATTGAGTATTTTGAGAATCAAAT  750

seq1  AATATGTAAAAATTTGTGCAACTTTTATA-TTCATATCCTTTCATACACT  799
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  AATATGTAAAAATTTGTGCAACTTTTATATTTCATATCCTTTCATACACT  800

seq1  AAAAATATCATTAATGAATA-TTTAATACTATCCATAACTGAGGATCCTA  848
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  AAAAATATCATTAATGAATATTTTAATACTATCCATAACTGAGGATCCTA  850

seq1  TAACT-AATGTTTAATACTAAATTGTTTCAAAACATACAAATTATTATTT  897
      ||||| ||||||||||||||||||||||||||||||||||||  | ||||
seq2  TAACTAAATGTTTAATACTAAATTGTTTCAAAACATACAAATATTAATTT  900

seq1  GATAATTAAGCATAGTAAAAAAGCATAAATTATTAAAAATTAATTATTAA  947
      |||||||||||||||||||||||||||||||||  ||||||||||| |||
seq2  GATAATTAAGCATAGTAAAAAAGCATAAATTAT--AAAATTAATTA-TAA  947

seq1  GAAATATATTCAAAAGTCCTTATATGATACCAACTGATACAGTGGGA-GA  996
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GAAATATATTCAAAAGTCCTTATATGATACCAACTGATACAGTGGGAGGA  997

seq1  GTATTTAAAACACATTATATATATGTGTGTATATTTTCTAACAAACAGTT  1046
      |||||||||||||| ||||  || |||   |||  |||||   ||||| |
seq2  GTATTTAAAACACA-TATAATTAAGTGGTGATA--TTCTA--CAACAGGT  1042

seq1  TGCTTAAAAAAAGAATATCAGTGTTTCTAGGAAAGAAATTATTTTATCAG  1096
      ||||   |||||||||||||||||| |   ||| |||||   ||||||| 
seq2  TGCT---AAAAAGAATATCAGTGTTCC--AGAAGGAAAT--ATTTATCAT  1085

seq1  TGACTATATTTTAAATTTTTCAAAATAGCAAAAACTCTTTGAAGTTAAAC  1146
       |||| |||||  |||||    |||||||  |||||| ||| ||||  ||
seq2  GGACT-TATTT--AATTT---CAAATAGC--AAACTC-TTGGAGTT--AC  1124

seq1  ATTAAGAAAATGCTAAT  1163
      ||| |||||||||||||
seq2  ATT-AGAAAATGCTAAT  1140