BAC Information

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BAC

Clone NameB6Ng01-137J17
Chromosome3 (Build37)16 (Build37)
Map Location 41,059,224 - 41,059,73780,237,271 - 80,237,482
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100040882, Intu, Slc25a31, Hspa4l, Plk4, Mfsd8, LOC100039027, LOC100039043, 3110057O12Rik, 1700034I23Rik, Larp2, Pgrmc2
Downstream geneEG666004, Ppia-ps3_337.1, LOC100039115, Phf17, Sclt1, D3Ertd751e, LOC666031
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-137J17.bB6Ng01-137J17.g
ACCDH937083DH937084
length983212
definitionDH937083|Mus musculus domesticus DNA, BAC clone: B6Ng01-137J17, 5' end.DH937084|Mus musculus domesticus DNA, BAC clone: B6Ng01-137J17, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(41,059,224 - 41,059,737)(80,237,271 - 80,237,482)
sequence
gaattcattgtttagctctgagccccattttttaatggggttattcgatt
ttctggagtctaccttattgagttctttatataaatattgaatataagtc
ccctatctgatttaggatatcaaaagattctttcccaatctgttggtggc
ctttttgtcttattgacagtgtcttttgccttacagaagctttgcaattt
tatgaggtcccatttgtcaattctcgatcttacagcacaagccattcctg
ttcaattcaggaatttttcccctgtacccatatctatgaggcttttcccc
actttctcctctataagtttcagtgtctctggttttatgcagagttcctt
aatccacttagatttgaccttagtacaaagagaaaagaatggatcaattc
tcattcttctacatgataaccaccagttgtgccagcaccatttgcagaaa
atgctgtcttttttccactgtatggttttagctcctttttcaaagatcaa
atgaccataagtgtgtgggttcatttccgggtcttcaattctattccatt
ggtctacttgtctgtcactataccagtaccatgaagtttttatcacaatt
gctctgtagtacagctttaggtcaggcatgtcccctagaggttgttttat
ccttgataagaatttttgctatcctaggttttttgttattccagatgaat
ttgcagattgccctttctaattcgttgaagaattgagttggaattttgat
ggggattgcattgaatctgtagattgcttttggcaagatagccattttta
ctatattgatcctgccaatccatgagtatgggagatctttccatcttcag
agatcttctttaatttctttctcagagacttgaaattctttttttttttc
cattttttattaggtatttaactcatttacatttcatgctaataccaaaa
gtccccatatcacccaccccactccctgccacc
ttggtgactgtaccagtgtatgcattgaacttaggaaagatgcagtcaaa
tcatggttgcagtatgagtcttctcaaagaaacatctaatgcacttgcca
atactcgagtttaaaaaaatccaaatgggcccaagtttggagttttttaa
tggtaatagccataataggtatccagtgtgtgtgtgtgtgtgtgtgtgtg
tgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_41059224_41059737
seq2: B6Ng01-137J17.b_44_560 (reverse)

seq1  CCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCA  50
      |||||||| |||||||| |||||||| || || |||||||||||||| ||
seq2  CCACACACTTATGGTCATTTGATCTTTGAAAAAGGAGCTAAAACCATACA  50

seq1  GTGGAAAAAAGACAGCATTTTCAACAAATGGTGCTGGCACAACTGGTTGT  100
      ||||||||||||||||||||||  ||||||||||||||||||||||| ||
seq2  GTGGAAAAAAGACAGCATTTTCTGCAAATGGTGCTGGCACAACTGGTGGT  100

seq1  TATCATGTAGAAGAATGCGAATTGATCCACTCCTATCTCCTTGTACTAAG  150
      ||||||||||||||||| ||||||||||| || | |||| ||||||||||
seq2  TATCATGTAGAAGAATGAGAATTGATCCATTCTTTTCTCTTTGTACTAAG  150

seq1  GTCAAATCTAAGTGGATCAAGGAACGCCACATAAAACCAGAGACACTGAA  200
      ||||||||||||||||| ||||||| |  |||||||||||||||||||||
seq2  GTCAAATCTAAGTGGATTAAGGAACTCTGCATAAAACCAGAGACACTGAA  200

seq1  ACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGTCACAGGGG  250
      ||||||||||||||||||||||||||||||   ||||||||  |||||||
seq2  ACTTATAGAGGAGAAAGTGGGGAAAAGCCTCATAGATATGGGTACAGGGG  250

seq1  AAAAATTCCTGCATAGAACAGCAATGGCTTGTGCTGTAAGATTGAGAATA  300
      ||||||||||| || |||||| |||||||||||||||||||| |||||| 
seq2  AAAAATTCCTGAATTGAACAGGAATGGCTTGTGCTGTAAGATCGAGAATT  300

seq1  GACAAATGGGACCTCATGAAACTGCAAAGCTTCTGCAAGGCAAAAGACAC  350
      ||||||||||||||||| ||| ||||||||||||| ||||||||||||||
seq2  GACAAATGGGACCTCATAAAATTGCAAAGCTTCTGTAAGGCAAAAGACAC  350

seq1  CGTCAATAAGACAAAAAGG-CACCAACAGATTGGGAAAGGATCTTTACCT  399
       |||||||||||||||||| ||||||||||||||||||| ||||||   |
seq2  TGTCAATAAGACAAAAAGGCCACCAACAGATTGGGAAAGAATCTTTTGAT  400

seq1  ATCCTAAATCAGATAGGGGACTAATATCCAATA--TATATCAAGAACTCA  447
      |||||||||||||||||||||| |||| |||||  ||||| |||||||||
seq2  ATCCTAAATCAGATAGGGGACTTATATTCAATATTTATATAAAGAACTCA  450

seq1  AGAAGGTGGATTCCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCA  497
      | ||||| || ||||||||||| |||||||||||||||||||||||||||
seq2  ATAAGGTAGACTCCAGAAAATCGAATAACCCCATTAAAAAATGGGGCTCA  500

seq1  GAGCTAAACAAAGAATT  514
      ||||||||||| |||||
seq2  GAGCTAAACAATGAATT  517

seq1: chr16_80237271_80237482
seq2: B6Ng01-137J17.g_72_283 (reverse)

seq1  CACACACACACACACACACACACACACACACACACACTGGATACCTATTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACACACTGGATACCTATTA  50

seq1  TGGCTATTACCATTAAAAAACTCCAAACTTGGGCCCATTTGGATTTTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTATTACCATTAAAAAACTCCAAACTTGGGCCCATTTGGATTTTTTT  100

seq1  AAACTCGAGTATTGGCAAGTGCATTAGATGTTTCTTTGAGAAGACTCATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCGAGTATTGGCAAGTGCATTAGATGTTTCTTTGAGAAGACTCATA  150

seq1  CTGCAACCATGATTTGACTGCATCTTTCCTAAGTTCAATGCATACACTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAACCATGATTTGACTGCATCTTTCCTAAGTTCAATGCATACACTGG  200

seq1  TACAGTCACCAA  212
      ||||||||||||
seq2  TACAGTCACCAA  212