BAC Information

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BAC

Clone NameB6Ng01-137M11
Chromosome3 (Build37)
Map Location 23,199,537 - 23,200,667
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC675593, LOC100040378, LOC623751
Downstream geneLOC100039548, EG635702
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-137M11.bB6Ng01-137M11.g
ACCDH937205DH937206
length1,2431,117
definitionDH937205|Mus musculus domesticus DNA, BAC clone: B6Ng01-137M11, 5' end.DH937206|Mus musculus domesticus DNA, BAC clone: B6Ng01-137M11, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaggaaatagaggcagaaagattagaagtttcagctaaaacttgg
ctacagagaaggttgaatttaacctgggcaacaagagagcctgtctcaga
aataaataagtaaataagtaaaaatgaaaacaaaataaaataacaaaaac
tctctaacttactaattgagtaaatacacacatggagttttaactctgaa
taaattatttggagctcacaggtaccaagagtgtgaatctattgccattt
tttttctttgataaattccctctagccataaattggtacagcttccaaag
ctcatcaaagaagattctctgcgcagtggatattatttactgcagaaact
aacaactggttaaagtccagatgtcaagtgtttgtgaaggcctaggccac
aaggtggatatttgtatcatgccctcgcttcaaagcttgggtactaccta
aaagggggcaggggcacggaaagactaaacaccagagcctggggaaatca
agagaaaatgattacatgacaacttgcacataggaactcatagcagctga
atttgccttttcaagacctgaacaaaatcaagccagtcaatattctagca
cggttagaaaaggagtcagaacccacaagcctagttgaagagctattgat
agttaatgccttcgggggagaaagattacaagttttcaactacactccaa
tggaagaacccactgtacaagttgaattggttgattttttttctacacat
aaacatcttaaaatttatttcttattaatgtggtcagaaagtgtgaatgt
tgaggtaaggggaatacattgtgaaatcagtcttccgtaacttactgtgg
gttagttaacaggatataagtcaggtcatgagggttgaaaagcaaacatt
tacttgccaaagcatgtttgttttgttttgtttgtttgttttgtttgttt
gtttgtttgtttgttgattctgagacagggtttctctgtgtatctctggc
tgtctgaactcactctgtagacaagctgccttgaactcagaaatccacct
gctctgcctccagtgctgggattcaagtgtacaccaccactgcctggcca
agcatgtttttggctcttttctacggtcattcttaccagttataagataa
aggatttagacgcgaaaaatctctgaagaatagcttaactaagaatgcat
tcgttcagttagactgctatcacttgaatagaaactctgtaat
gaattcaatatcaagtgacagacatgaactaaacctctttttgcttatag
tttaaatccacgattacagtagagcatataatacttgaatctgaaataac
tgatttatatgtaaattatggtcataatttagaatgtaaggtttatccca
atatttgacttattcaatcatgacattctctatctcaatctcattttcta
tatcttagtatatactatctacttagcagtatacttgtattataagaact
atttaaagaaaactgcttttaacttttagcactaaaaagtcccctctgaa
atatctgacctccaaaaacataacccaaggaaaataaattacaaaccatt
gttatggttttcatgtatgtagcaccaattttctcatggccttaagagat
tcatcatcttctccaagtttatattatttttctttccatgggagtctccc
agattacaataatcatagtcagcatattttttctaactttgtgaagaatg
ttagaaaatctatttagatgcattatgaggggctgcttcagagtttgcag
gtgtatggagaaacaaagaacaattcacgggatacctcttgggggtgtct
tcagcttctgatgtgtgtgctacattaataaccatggccatgcagaatgg
agtctttatatcaaggagatataagaaaggcattttttccaaatatttca
agtttgtattttatagaaaatacacaaatattttcttcctcaatgattta
caaaggtatacatatttctttatttatccctgtagattcttccttttggt
tcatttagcaatcatactatttttagccacaactttctttctttaaagat
gtttgtgggcacacaagcaggtgacctgtttgcctcctacattgttccag
gagatgctattcgagtatcctcacactctgtttcttaattgcttctcaat
tttcctagttggcttttctacatttcttgtgtatttcaacttgatataat
agatggacttaaatgcataatattgcagataactgcaacacagaaagaaa
ggctttatattcctttttgtacaaatgtagccaataataatatacctaaa
taaagtcatggttatag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_23199537_23200667
seq2: B6Ng01-137M11.g_68_1184

seq1  GAATTCAATATCAAGTGACAGACATGAACTAAACCTCTTTTTGCTTATAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATATCAAGTGACAGACATGAACTAAACCTCTTTTTGCTTATAG  50

seq1  TTTAAATCCACGATTACAGTAGAGCATATAATACTTGAATCTGAAATAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATCCACGATTACAGTAGAGCATATAATACTTGAATCTGAAATAAC  100

seq1  TGATTTATATGTAAATTATGGTCATAATTTAGAATGTAAGGTTTATCCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTATATGTAAATTATGGTCATAATTTAGAATGTAAGGTTTATCCCA  150

seq1  ATATTTGACTTATTCAATCATGACATTCTCTATCTCAATCTCATTTTCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTGACTTATTCAATCATGACATTCTCTATCTCAATCTCATTTTCTA  200

seq1  TATCTTAGTATATACTATCTACTTAGCAGTATACTTGTATTATAAGAACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTAGTATATACTATCTACTTAGCAGTATACTTGTATTATAAGAACT  250

seq1  ATTTAAAGAAAACTGCTTTTAACTTTTAGCACTAAAAAGTCCCCTCTGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAAGAAAACTGCTTTTAACTTTTAGCACTAAAAAGTCCCCTCTGAA  300

seq1  ATATCTGACCTCCAAAAACATAACCCAAGGAAAATAAATTACAAACCATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTGACCTCCAAAAACATAACCCAAGGAAAATAAATTACAAACCATT  350

seq1  GTTATGGTTTTCATGTATGTAGCACCAATTTTCTCATGGCCTTAAGAGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATGGTTTTCATGTATGTAGCACCAATTTTCTCATGGCCTTAAGAGAT  400

seq1  TCATCATCTTCTCCAAGTTTATATTATTTTTCTTTCCATGGGAGTCTCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCATCTTCTCCAAGTTTATATTATTTTTCTTTCCATGGGAGTCTCCC  450

seq1  AGATTACAATAATCATAGTCAGCATATTTTTTATAACTTTGTGAAGAATG  500
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AGATTACAATAATCATAGTCAGCATATTTTTTCTAACTTTGTGAAGAATG  500

seq1  TTAGAAAATCTATTTAGATGCATTATGAGGGGCTGCTTCAGAGTTTGCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAAATCTATTTAGATGCATTATGAGGGGCTGCTTCAGAGTTTGCAG  550

seq1  GTGTATGGAGAAACAAAGAACAATTCACGGGATACCTCTTGGGGGTGTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATGGAGAAACAAAGAACAATTCACGGGATACCTCTTGGGGGTGTCT  600

seq1  TCAGCTTCTGATGTGTGTGCTACATTAATAACCATGGCCATGCAGAATGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTTCTGATGTGTGTGCTACATTAATAACCATGGCCATGCAGAATGG  650

seq1  AGTCTTTATATCAAGGAGATATAAGAAAGGCATTTTTTCCAAATATTTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTTATATCAAGGAGATATAAGAAAGGCATTTTTTCCAAATATTTCA  700

seq1  AGTTTGTATTTTATAGAAAATACACAAATATTTTCTTCCTCAATGATTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGTATTTTATAGAAAATACACAAATATTTTCTTCCTCAATGATTTA  750

seq1  CAAAGGTATACATATTTCTTTATTTATCCCTGTAGATTCTTCCTTTTGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGTATACATATTTCTTTATTTATCCCTGTAGATTCTTCCTTTTGGT  800

seq1  TCATTTAGCAAATCATACTATTTTTAGCCACAACTTTCTTTCTTTAAAGA  850
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTAGC-AATCATACTATTTTTAGCCACAACTTTCTTTCTTTAAAGA  849

seq1  TGTTTGTGGGCACACAAGCAGGTGACCTGTTTGCCTCCTACATTGTTCCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTGGGCACACAAGCAGGTGACCTGTTTGCCTCCTACATTGTTCCA  899

seq1  GGAGATGCTATTCGAGTATCCTCACACTCTTGTTTTCTTAATTGCTTCTT  950
      ||||||||||||||||||||||||||||||   ||||||||||||||| |
seq2  GGAGATGCTATTCGAGTATCCTCACACTCT--GTTTCTTAATTGCTTC-T  946

seq1  CAATTTTCCTAGTTGGCTTTTTCTACATTTCTTGTGTAATTTCAACTTGA  1000
      ||||||||||||||||| ||||||||||||||||||| ||||||||||||
seq2  CAATTTTCCTAGTTGGC-TTTTCTACATTTCTTGTGT-ATTTCAACTTGA  994

seq1  TATAATAGATGGACTTAAAATGCATAATATTGCAAGATAACTGCAACACA  1050
      |||||||||||||||| |||||||||||||||| ||||||||||||||||
seq2  TATAATAGATGGACTT-AAATGCATAATATTGC-AGATAACTGCAACACA  1042

seq1  GAAAGAAAAGGCTTTATATTCCCTTTTATGTACAGATAGTAGCCAATAAT  1100
      ||||| ||||||||||||||||  ||| |||||| || ||||||||||||
seq2  GAAAG-AAAGGCTTTATATTCC--TTTTTGTACAAAT-GTAGCCAATAAT  1088

seq1  -ATATACCTAAAATAAAGTCATATGTTTATAG  1131
       |||||||| ||||||||||  ||| ||||||
seq2  AATATACCT-AAATAAAGTC--ATGGTTATAG  1117