BAC Information

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BAC

Clone NameB6Ng01-137N10
Chromosome3 (Build37)
Map Location 64,110,978 - 64,241,841
singlet/doubletdoublet
Overlap gene4930518C23Rik, EG667031, EG637053
Upstream geneMme, Plch1, LOC100040836, E130311K13Rik, Slc33a1, Gmps, LOC670032, EG56544, LOC380739, EG637004
Downstream geneLOC672951, EG639869, EG667060, EG667069, LOC100040918, 4933425M15Rik, LOC670110, Kcnab1, Ssr3, EG433604
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-137N10.bB6Ng01-137N10.g
ACCDH937249DH937250
length1,153963
definitionDH937249|Mus musculus domesticus DNA, BAC clone: B6Ng01-137N10, 5' end.DH937250|Mus musculus domesticus DNA, BAC clone: B6Ng01-137N10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(64,240,684 - 64,241,841)(64,110,978 - 64,111,946)
sequence
gaattctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
ttttcaataggctaaagggactgtggtcaatgcaataaagatgactcgtc
caatgaagagaagaacaagtgtgtgacaaagcttgtggaagtccttgctt
atgagaaggccctggggttctaccttgttatcctgtccatcttttgggtg
cttgcggttttggcagtaactattgtatatgtaataaataggcacattcc
attggtgaaagccagtgatcgggaactgaacttcctcattcagatatctc
tggttatcacagtgctgtcaactatgctgttcataagcaagccatgcaac
tggtcctgcatggtcctccagatcactctggtactggacttttgtctttg
tctgtcttccattcttagaaagattatttcactctactttgcctacagaa
tttccatatccaaaacctgtcttatatctacgcataccattttttgaaaa
ctcattgtgttgatctgtgttgtagaggagattgatgtatgcacagctta
cttggcgttggagcttctgaggatcttcaagaacattgaacctcaaaatg
taaagatcatctttgaatgcaatgaagggtctatagaatttctgtgttac
atatttgggtttgaagaccttctggctctgctgtttccttacaacttttg
tggctcaccaggtgccagaaaactatttatgaagggaaatttttcacttt
ggggatgctggtctttttcaaatgtctggatcttttttttgtccctgctt
acttgagcacaatggcaaattcaaagtggctgtggaaatatttgccattt
tggcatctaactatggattgtaagactgtctatttcttcccaagtgcttc
attatttgctgaagacacatatgtacagtgaagaaacttcgtaagaagat
tccccctgctgacaggagcttccagctgacctcagcttctgtgagcagtg
agctaacaacacacgggtccattcttctggaatgacagagctctgagctt
cttaaaacatgcaatgccattgatcatctggctcaaccttcctttccctg
aatctgaatgtcgtcgtaatgctctgggataattggagatttggacttcc
ata
gaattctttggattaacaaacattggggtcttctggattaccagctgtgg
taaagaattatttgatggagtggtacagaatagttatttcttttgaccct
agcaatgaattggttgttctaagcctgtggccatcaggccaaatgcattc
agaatgtctatcagaaatattaatagtcaaagtgtggtaaatatcagaat
caccacgatatatctttaaacagactactggactccttctctagtattcc
acaataagtaggtatacttagaggcctggaactttgcttttctcacaggc
tgtaggatgatagaaagctacagccacagagtcacactttcaggaccatt
aatgagcaaacatttttctgtacattgactctgaggaggatccttgtggt
cctaagatcacaaagcagagtttggggggtggtggtggtagtcctgcttg
tttctccagttgaattcattctgttgtcacagcagtacaagttagaatag
aaaacatgttcattatctgaagttagggatatagcagtccaaaatgaaga
acaatgtgttctataaggatgattcaagtgttttgatttttctggggaat
ttatccacccattgaagttgtttaagagaacaaaaggcattgaagtaatt
tgcgtggcaggataagaatgaactgtattagggtcacaaatcccttctgg
tccatgacaccaccggggtttccttgcctgtggagtctctggacacccga
aaggaccccccacaggatcacccatgagatcttaagacctctggtgagtg
gaacacaacttctgccaggaggcaggttcgaactccagatatctgggcac
ctttcctggagaggagagcttgcctgcaagagtactctgaccctgaaact
aagggagatctagtctcccaggtctgctgatagaggctaactaaccactg
aggaacatctcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_64240684_64241841
seq2: B6Ng01-137N10.b_47_1199 (reverse)

seq1  TATGGAAGTCCAAATCCCCAATTATTCCAGAGCATCAGCAGCAACTTCAG  50
      |||||||||||||||| |||||||| ||||||||| |  |  |  |||||
seq2  TATGGAAGTCCAAATCTCCAATTATCCCAGAGCATTACGACGACATTCAG  50

seq1  AATCAGGTGAAAAGGAAGGTTGAGCCAGATGATCATTGGCATTTGCATGT  100
      | ||||  | ||||||||||||||||||||||||| ||||| ||||||||
seq2  ATTCAG--GGAAAGGAAGGTTGAGCCAGATGATCAATGGCA-TTGCATGT  97

seq1  TTTATGGAGCTCAGAGCTCTGCTCA-TCCAGAAGAATGGACACCGTGTTG  149
      |||| | |||||||||||||| ||| ||||||||||||||| ||||| ||
seq2  TTTAAGAAGCTCAGAGCTCTG-TCATTCCAGAAGAATGGAC-CCGTG-TG  144

seq1  TTGTTAAGCTCACTGCTCACAGAAGCTGAGCTCAGCTGGAAGCTCCTGTC  199
      ||||| |||||||||||||||||||||||| |||||||||||||||||||
seq2  TTGTT-AGCTCACTGCTCACAGAAGCTGAGGTCAGCTGGAAGCTCCTGTC  193

seq1  AGCAGGGGGACTCTTC-TACGAAGTTTCTTCACTGTACATATGTGTCCTC  248
      |||||||||| ||||| |||||||||||||||||||||||||||||| ||
seq2  AGCAGGGGGAATCTTCTTACGAAGTTTCTTCACTGTACATATGTGTCTTC  243

seq1  AGCAAAATAATGAAGCACTTGGGAAGAAATAGACAGTCTAACAATCCATA  298
      ||| ||||||||||||||||||||||||||||||||||| ||||||||||
seq2  AGC-AAATAATGAAGCACTTGGGAAGAAATAGACAGTCTTACAATCCATA  292

seq1  GTTAGATGCCAAAATGGCAAATATTTCCACAGCCACTTTGAATTTGCCAT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGATGCCAAAATGGCAAATATTTCCACAGCCACTTTGAATTTGCCAT  342

seq1  TGGTGCTCAAGTAAGCAGGGAC-AAAAAAAGATCCAGACATTTGAAAAAG  397
      | |||||||||||||||||||| |||||||||||||||||||||||||||
seq2  T-GTGCTCAAGTAAGCAGGGACAAAAAAAAGATCCAGACATTTGAAAAAG  391

seq1  ACCAGCATCCCCAAAGTGAAAAATTTCCCTTCAT-AATAGTTTTCTGGCA  446
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  ACCAGCATCCCCAAAGTGAAAAATTTCCCTTCATAAATAGTTTTCTGGCA  441

seq1  CCTGGTGAGCCACAAAAGTTGTAAGGAAACAGCAGAGCCAGAAGGTCTTC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTGAGCCACAAAAGTTGTAAGGAAACAGCAGAGCCAGAAGGTCTTC  491

seq1  AAACCCAAATATGTAACACAGAAATTCTATAGACCCTTCATTGCATTCAA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCAAATATGTAACACAGAAATTCTATAGACCCTTCATTGCATTCAA  541

seq1  AGATGATCTTTACATTTTGAGGTTCAATGTTCTTGAAGATCCTCAGAAGC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGATCTTTACATTTTGAGGTTCAATGTTCTTGAAGATCCTCAGAAGC  591

seq1  TCCAACGCCAAGTAAGCTGTGCATACATCAATCTCCTCTACAACACAGAT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAACGCCAAGTAAGCTGTGCATACATCAATCTCCTCTACAACACAGAT  641

seq1  CAACACAATGAGTTTTCAAAAAATGGTATGCGTAGATATAAGACAGGTTT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACACAATGAGTTTTCAAAAAATGGTATGCGTAGATATAAGACAGGTTT  691

seq1  TGGATATGGAAATTCTGTAGGCAAAGTAGAGTGAAATAATCTTTCTAAGA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATATGGAAATTCTGTAGGCAAAGTAGAGTGAAATAATCTTTCTAAGA  741

seq1  ATGGAAGACAGACAAAGACAAAAGTCCAGTACCAGAGTGATCTGGAGGAC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAGACAGACAAAGACAAAAGTCCAGTACCAGAGTGATCTGGAGGAC  791

seq1  CATGCAGGACCAGTTGCATGGCTTGCTTATGAACAGCATAGTTGACAGCA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCAGGACCAGTTGCATGGCTTGCTTATGAACAGCATAGTTGACAGCA  841

seq1  CTGTGATAACCAGAGATATCTGAATGAGGAAGTTCAGTTCCCGATCACTG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGATAACCAGAGATATCTGAATGAGGAAGTTCAGTTCCCGATCACTG  891

seq1  GCTTTCACCAATGGAATGTGCCTATTTATTACATATACAATAGTTACTGC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCACCAATGGAATGTGCCTATTTATTACATATACAATAGTTACTGC  941

seq1  CAAAACCGCAAGCACCCAAAAGATGGACAGGATAACAAGGTAGAACCCCA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACCGCAAGCACCCAAAAGATGGACAGGATAACAAGGTAGAACCCCA  991

seq1  GGGCCTTCTCATAAGCAAGGACTTCCACAAGCTTTGTCACACACTTGTTC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCTTCTCATAAGCAAGGACTTCCACAAGCTTTGTCACACACTTGTTC  1041

seq1  TTCTCTTCATTGGACGAGTCATCTTTATTGCATTGACCACAGTCCCTTTA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTTCATTGGACGAGTCATCTTTATTGCATTGACCACAGTCCCTTTA  1091

seq1  GCCTATTGAAAACACACACACACACACACACACACACACACACACACACA  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTATTGAAAACACACACACACACACACACACACACACACACACACACA  1141

seq1  CACACAGAATTC  1158
      ||||||||||||
seq2  CACACAGAATTC  1153

seq1: chr3_64110978_64111946
seq2: B6Ng01-137N10.g_70_1032

seq1  GAATTCTTTGGATTAACAAACATTGGGGTCTTCTGGATTACCAGCTGTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGGATTAACAAACATTGGGGTCTTCTGGATTACCAGCTGTGG  50

seq1  TAAAGAATTATTTGATGGAGTGGTACAGAATAGTTATTTCTTTTGACCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAATTATTTGATGGAGTGGTACAGAATAGTTATTTCTTTTGACCCT  100

seq1  AGCAATGAATTGGTTGTTCTAAGCCTGTGGCCATCAGGCCAAATGCATTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATGAATTGGTTGTTCTAAGCCTGTGGCCATCAGGCCAAATGCATTC  150

seq1  AGAATGTCTATCAGAAATATTAATAGTCAAAGTGTGGTAAATATCAGAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGTCTATCAGAAATATTAATAGTCAAAGTGTGGTAAATATCAGAAT  200

seq1  CACCACGATATATCTTTAAACAGACTACTGGACTCCTTCTCTAGTATTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACGATATATCTTTAAACAGACTACTGGACTCCTTCTCTAGTATTCC  250

seq1  ACAATAAGTAGGTATACTTAGAGGCCTGGAACTTTGCTTTTCTCACAGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATAAGTAGGTATACTTAGAGGCCTGGAACTTTGCTTTTCTCACAGGC  300

seq1  TGTAGGATGATAGAAAGCTACAGCCACAGAGTCACACTTTCAGGACCATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGGATGATAGAAAGCTACAGCCACAGAGTCACACTTTCAGGACCATT  350

seq1  AATGAGCAAACATTTTTCTGTACATTGACTCTGAGGAGGATCCTTGTGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGCAAACATTTTTCTGTACATTGACTCTGAGGAGGATCCTTGTGGT  400

seq1  CCTAAGATCACAAAGCAGAGTTTGGGGGGTGGTGGTGGTAGTCCTGCTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAGATCACAAAGCAGAGTTTGGGGGGTGGTGGTGGTAGTCCTGCTTG  450

seq1  TTTCTCCAGTTGAATTCATTCTGTTGTCACAGCAGTACAAGTTAGAATAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCCAGTTGAATTCATTCTGTTGTCACAGCAGTACAAGTTAGAATAG  500

seq1  AAAACATGTTCATTATCTGAAGTTAGGGATATAGCAGTCCAAAATGAAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACATGTTCATTATCTGAAGTTAGGGATATAGCAGTCCAAAATGAAGA  550

seq1  ACAATGTGTTCTATAAGGATGATTCAAGTGTTTTGATTTTTCTGGGGAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGTGTTCTATAAGGATGATTCAAGTGTTTTGATTTTTCTGGGGAAT  600

seq1  TTATCCACCCATTGAAGTTGTTTAAGAGAACAAAAGGCATTGAAGTAATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCCACCCATTGAAGTTGTTTAAGAGAACAAAAGGCATTGAAGTAATT  650

seq1  TGCGTGGCAGGATAAGAATGAACTGTATTAGGGTCACAAATCCCTTCTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGTGGCAGGATAAGAATGAACTGTATTAGGGTCACAAATCCCTTCTGG  700

seq1  TCCATGACACCACCGGGG-TTCCTTGCCTGTGGAGTCTCTGGACACCCGA  749
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TCCATGACACCACCGGGGTTTCCTTGCCTGTGGAGTCTCTGGACACCCGA  750

seq1  AAGGACCCCCCACAGGATCACCCATGAGATCTTAAGACCTCTGGTGAGTG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACCCCCCACAGGATCACCCATGAGATCTTAAGACCTCTGGTGAGTG  800

seq1  GAACACAACTTCTGCCAGGAGGCAGGTTCGAACGCCAGATATCTGGGCAC  849
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GAACACAACTTCTGCCAGGAGGCAGGTTCGAACTCCAGATATCTGGGCAC  850

seq1  CTTCCCTGGAAGAGGAGAGCTTGCCTGCAGAGAGTACTCTGACCACTGAA  899
      ||| ||||| ||||||||||||||||||| |||||||||||||| |||||
seq2  CTTTCCTGG-AGAGGAGAGCTTGCCTGCA-AGAGTACTCTGACC-CTGAA  897

seq1  ACTAAGGGGAGATCTAGTCTCCCAGGTCTGCTGATAGAGGCTAACATAAT  949
      ||||| ||||||||||||||||||||||||||||||||||||||| ||| 
seq2  ACTAA-GGGAGATCTAGTCTCCCAGGTCTGCTGATAGAGGCTAAC-TAAC  945

seq1  CACCTGAGGAACAAGCTCTA  969
      || ||||||||| | |||||
seq2  CA-CTGAGGAAC-ATCTCTA  963