BAC Information

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BAC

Clone NameB6Ng01-138D15
Chromosome3 (Build37)
Map Location 63,012,727 - 63,013,938
singlet/doubletsinglet
Overlap genenone
Upstream gene4631416L12Rik, Dhx36, Gpr149, LOC676984, LOC666967
Downstream geneMme, Plch1, LOC100040836, E130311K13Rik, Slc33a1, Gmps, LOC670032, EG56544, 4930518C23Rik, LOC380739
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-138D15.bB6Ng01-138D15.g
ACCDH937546DH937547
length1,1811,091
definitionDH937546|Mus musculus domesticus DNA, BAC clone: B6Ng01-138D15, 5' end.DH937547|Mus musculus domesticus DNA, BAC clone: B6Ng01-138D15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccctaggttttgatttctccagagatgcagaggcatgtggtccta
ggctgaatggtacaagagggtagaaggaaagctggtccacagcagggagg
tgtatatagagggccagcattttcaaggtaagggagatgaatttctggtt
ctgagcagggtagagtgggaagaaagaaagggtagattctgctcaggagc
atgaagatgaagagctggaaggagttgggaaagttcctttacagtgtttc
tgagactgctgaatgacagcatgtcaaatgctcagcagttgacaagggaa
taagcagagggttttgaaaagataggtttggcattctggcaatgtgacct
ttctatcaacagatatagtcccctatcaataggacaatgataatggagcc
atgaatgccaactatggatgtttgaggccattacaatcacagaaagttca
cttcagaagagcttgtctttaatttgccacatgtatgtgtgtccatatgt
aatatcgatgacaaaatgcctactgaattttagattaatgagaatatcta
gtttctgcaaaattctgtgcagcaaagagtttgagattttcaaagaaaga
ttgggagaattatgtcagtatggggaaagttgagaatatgttgacacaat
ttcttctggccaaaatttattgaattcataaattagcaacaattatgctt
ttgtactatgtcactagctcccattagacatgtatctttggaacttcttc
acaaactcattattcactactggacattttattaaacatgtaacccagac
ttataaaaaggagaaaatttatttttctatttctacactcaaaaggatga
accctcaccttcagggcatacatcacatggacaaattccaaatgaagact
acaagttgacacaaagtgagagctaagcaccattacaaaattctatgcca
ttgtttagtcaggttttaattgctgcaatgaaacagcatgaccaaagcaa
gttggggagatatattgttgttcatcatagaaagaagtcaaggcagaccg
agtagagctgatgtagaggccatagagatgttgctactgttgcttcctac
cctactcaacttcttatacacagcttacgaaacaggaaacatcagcacaa
tgggctgactctctatcaatcgaataagaaa
gaattctctctgcattttagataatttggataagaatttgttaatcttat
tgatttttctctagaaccatctcttcagttcatttattctttgaattgtt
ctctttgtttctattttattgatttcatcccttgatctgattaccctctt
cggtgtaattacttcttaaagttatagaaacttctgaaagttctagaact
ttcaggtgtgctgttaagttgctagtatgagatctctccaatttttcatg
taggcattaagctctatgaagtttcctcttagcaccactttcattgtgtc
ccataagtttgggtatgtgctatgttcattttcactgaattctagaaagc
acttaatttcttttattatttctgtgttgacccatttcattcagtaaaga
gttgttcttgatatccagccttaatctgttgtagtttgatgggatggaag
gagttatttcaattttcttgcatttgtagagacttactttgaatctgtct
gtgtggtcaatattatagaaatttccatgagatgtggagaagaaggtata
ctcttttgtgtttgggtaaaatatcctgtaaatacctgttaatccaattt
gttttataacttgtgtaagctccagcatttctatgttaatttttctctgt
ataaccgatcatccataagtgagagtgcggtgctgaagtctcccactatt
actaatatgtgatttaagtttttgttttgttttcacaaccttgaatgccc
ttgtgtttgggacatagattttaagaatgtaaatactatctttgtagatc
tgtccattgatgtgtgtgttgtgtcatccccagtgtactttgattacttt
tggtttgagtctattttgatagatattaaaatggttaaatcacttgcttc
ttaggtacacttgcttaaatgtctgtttttttatattaagttctgagttt
gggtttagtaaaggatgatcctgtttaggatcgattttgtagtcttattt
tttattggataatgaaaccatttatatttgagagatacatacaagaatgg
tgatctggtattcttgtggtgaaaaggtgtgccgtgtgatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_63012727_63013938
seq2: B6Ng01-138D15.b_49_1229 (reverse)

seq1  TTTCTTAATTAGTGATTGATAGGGGAGGAGTCAGCCCATTGTGGCTGGTG  50
      ||||||| |    |||||||||     ||||||||||||||| |||| ||
seq2  TTTCTTATT---CGATTGATAG----AGAGTCAGCCCATTGT-GCTGATG  42

seq1  GTTTCCCTGGTCTGGTAGCCCTTGGTTGTATAAGAAGTTTGAGTAAGGTG  100
        || |||| |  |  |||   ||  ||||||||||| |||||||  | |
seq2  --TTTCCTGTTTCGTAAGC---TG--TGTATAAGAAG-TTGAGTA--GGG  82

seq1  TAGGAAGCAAACCAGTAAGCAACATCCTCTATGGCCTCTACATCAGCTCC  150
      ||||||||||  |||| |||||||| |||||||||||||||||||||| |
seq2  TAGGAAGCAA--CAGT-AGCAACAT-CTCTATGGCCTCTACATCAGCT-C  127

seq1  TACCTCCGGGTTCCTGCCCTGACTTCTTTCTATGATGAACAACAATATAT  200
      || |||  |||  ||||| |||||||||||||||||||||||||||||||
seq2  TA-CTC--GGT--CTGCCTTGACTTCTTTCTATGATGAACAACAATATAT  172

seq1  CTCCCCAACTTGCTTTTGGTCATGCTGTTTCATTGCAGCAATTAAAACCC  250
      ||||||||||||| ||||||||||||||||||||||||||||||||| ||
seq2  CTCCCCAACTTGC-TTTGGTCATGCTGTTTCATTGCAGCAATTAAAA-CC  220

seq1  TGACTAAAACAATGGCATAGAATTTTGTAATGGTGCTTAGCTCTCACTTT  300
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACT-AAACAATGGCATAGAATTTTGTAATGGTGCTTAGCTCTCACTTT  269

seq1  GTGTCAACTTGTAGTCTTCATTTGGAATTTGTCCATGTGATGTATGCCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCAACTTGTAGTCTTCATTTGGAATTTGTCCATGTGATGTATGCCCT  319

seq1  GAAGGTGAGGGTTCATCCTTTTGAGTGTAGAAATAGAAAAATAAATTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGTGAGGGTTCATCCTTTTGAGTGTAGAAATAGAAAAATAAATTTTC  369

seq1  TCCTTTTTATAAGTCTGGGTTACATGTTTAATAAAATGTCCAGTAGTGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTTTATAAGTCTGGGTTACATGTTTAATAAAATGTCCAGTAGTGAA  419

seq1  TAATGAGTTTGTGAAGAAGTTCCAAAGATACATGTCTAATGGGAGCTAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGAGTTTGTGAAGAAGTTCCAAAGATACATGTCTAATGGGAGCTAGT  469

seq1  GACATAGTACAAAAGCATAATTGTTGCTAATTTATGAATTCAATAAATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATAGTACAAAAGCATAATTGTTGCTAATTTATGAATTCAATAAATTT  519

seq1  TGGCCAGAAGAAATTGTGTCAACATATTCTCAACTTTCCCCATACTGACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCAGAAGAAATTGTGTCAACATATTCTCAACTTTCCCCATACTGACA  569

seq1  TAATTCTCCCAATCTTTCTTTGAAAATCTCAAACTCTTTGCTGCACAGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTCTCCCAATCTTTCTTTGAAAATCTCAAACTCTTTGCTGCACAGAA  619

seq1  TTTTGCAGAAACTAGATATTCTCATTAATCTAAAATTCAGTAGGCATTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCAGAAACTAGATATTCTCATTAATCTAAAATTCAGTAGGCATTTT  669

seq1  GTCATCGATATTACATATGGACACACATACATGTGGCAAATTAAAGACAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATCGATATTACATATGGACACACATACATGTGGCAAATTAAAGACAA  719

seq1  GCTCTTCTGAAGTGAACTTTCTGTGATTGTAATGGCCTCAAACATCCATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTCTGAAGTGAACTTTCTGTGATTGTAATGGCCTCAAACATCCATA  769

seq1  GTTGGCATTCATGGCTCCATTATCATTGTCCTATTGATAGGGGACTATAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGCATTCATGGCTCCATTATCATTGTCCTATTGATAGGGGACTATAT  819

seq1  CTGTTGATAGAAAGGTCACATTGCCAGAATGCCAAACCTATCTTTTCAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGATAGAAAGGTCACATTGCCAGAATGCCAAACCTATCTTTTCAAA  869

seq1  ACCCTCTGCTTATTCCCTTGTCAACTGCTGAGCATTTGACATGCTGTCAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTCTGCTTATTCCCTTGTCAACTGCTGAGCATTTGACATGCTGTCAT  919

seq1  TCAGCAGTCTCAGAAACACTGTAAAGGAACTTTCCCAACTCCTTCCAGCT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCAGTCTCAGAAACACTGTAAAGGAACTTTCCCAACTCCTTCCAGCT  969

seq1  CTTCATCTTCATGCTCCTGAGCAGAATCTACCCTTTCTTTCTTCCCACTC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATCTTCATGCTCCTGAGCAGAATCTACCCTTTCTTTCTTCCCACTC  1019

seq1  TACCCTGCTCAGAACCAGAAATTCATCTCCCTTACCTTGAAAATGCTGGC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCTGCTCAGAACCAGAAATTCATCTCCCTTACCTTGAAAATGCTGGC  1069

seq1  CCTCTATATACACCTCCCTGCTGTGGACCAGCTTTCCTTCTACCCTCTTG  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTATATACACCTCCCTGCTGTGGACCAGCTTTCCTTCTACCCTCTTG  1119

seq1  TACCATTCAGCCTAGGACCACATGCCTCTGCATCTCTGGAGAAATCAAAA  1200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCATTCAGCCTAGGACCACATGCCTCTGCATCTCTGGAGAAATCAAAA  1169

seq1  CCTAGGGAATTC  1212
      ||||||||||||
seq2  CCTAGGGAATTC  1181