BAC Information

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BAC

Clone NameB6Ng01-139F09
Chromosome3 (Build37)
Map Location 43,557,019 - 43,557,393
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039219, LOC677788
Downstream geneLOC100039264
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-139F09.bB6Ng01-139F09.g
ACCDH938348DH938349
length1,112369
definitionDH938348|Mus musculus domesticus DNA, BAC clone: B6Ng01-139F09, 5' end.DH938349|Mus musculus domesticus DNA, BAC clone: B6Ng01-139F09, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcacgcagttgaatccttctcaacagtctgtgttgcgggaacactt
cattaccaccgttccccagctgaggagttctgaatccaggctggatcctt
ctcaacagtctgttttacgggaacctttatgaccgtgacccgcagttctg
gttctggaatgagggatcttccttgcgccggtgatggtaaccgtcccggg
ttttcttgtcccgggttttctcgtcccaggtcttctcgtcccgggtctca
gcaccaactcttacacgcgttcgcgaccagccaggaaagacgcaacaaac
cggaatcttctgtggcaaaagctttattgcttacatcttcaggagccaga
gagcaagagagcaagagctttattgcttacatctttaggagccagagcgc
aagagagcaagagagagaatgatgaaaccccgtcccttttaaggagaatt
atcctccgcctaggacgtgtcactccctgattggctgcagcccatcggcc
gagttgtcgtcaaggggaaggcagaggacatggggtggagaactaccctt
ggcacatgcgcggattatttgtttaccacttagaacacaggatgtcagcg
ccatcttgcaacggcgaatgtgagggcggcttcccacagggacatagaga
agagactgatggagtggccaaacaaaaaactagtgcaactagagatcctc
ctatggacaagcaccaatccctggcactattaataatatactgctatgtt
tgcaagcctatctcctgagaggctctaaccagcagatgatagagggattc
agagaccctcagagaaaaattggatggagcttggggactctcatagaata
agaaagaaagattttgttccccagagagaataggaacttcacaggaagaa
caccaacagaatcaactaaccttggcccttgaagttacgagagactaatt
cactaatcaaggagcataaaaggttggcctctaggcctcccctccacaga
atataactttttctgtgatcccaacactgacccggggccatcccacagtg
tggctgcttgtagatttgtctttcttgaaagctgctaccgcctcagggag
aaggatgagtct
attgatagaggagacaacttcctggaaaaaaaaaagcaccaatagctcag
tcactaagatcatcaattaataaatgggactccatgaaagtgagaagctt
ctgaaacactaaggacccattaattggacaagacagctaatgtgctaatg
ttacagctaacaagaccccatatctagaagagctacagaatgccaaagtg
gggagaatcttttccccagggagaaactcctgatatattatcaaccctaa
gtatatgagcaaaactaaatgaattccgccagttgcatttatgtgtgtgc
atttgcgtgtgcctgggtgtctgcatttgcatgtgtgtgtgtgtgtgtgt
gtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_43557019_43557393
seq2: B6Ng01-139F09.g_67_441

seq1  GAATTCATTGATAGAGGAGACAACTTCCTGGAAAAAAAAAAGCACCAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGATAGAGGAGACAACTTCCTGGAAAAAAAAAAGCACCAATA  50

seq1  GCTCAGTCACTAAGATCATCAATTAATAAATGGGACTCCATGAAAGTGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGTCACTAAGATCATCAATTAATAAATGGGACTCCATGAAAGTGAG  100

seq1  AAGCTTCTGAAACACTAAGGACCCATTAATTGGACAAGACAGCTAATGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTCTGAAACACTAAGGACCCATTAATTGGACAAGACAGCTAATGTG  150

seq1  CTAATGTTACAGCTAACAAGACCCCATATCTAGAAGAGCTACAGAATGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATGTTACAGCTAACAAGACCCCATATCTAGAAGAGCTACAGAATGCC  200

seq1  AAAGTGGGGAGAATCTTTTCCCCAGGGAGAAACTCCTGATATATTATCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGGGGAGAATCTTTTCCCCAGGGAGAAACTCCTGATATATTATCAA  250

seq1  CCCTAAGTATATGAGCAAAACTAAATGAATTCCGCCAGTTGCATTTATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAAGTATATGAGCAAAACTAAATGAATTCCGCCAGTTGCATTTATGT  300

seq1  GTGTGCATTTGCGTGTGCCTGGGTGTCTGCATTTGCATGTGTGTGTGTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCATTTGCGTGTGCCTGGGTGTCTGCATTTGCATGTGTGTGTGTGT  350

seq1  GTGTGTGTGTGTGTGTGTGTGTGTG  375
      |||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGTGTG  375