BAC Information

Click to search

BAC

Clone NameB6Ng01-139G24
Chromosome3 (Build37)7 (Build37)
Map Location 71,665,106 - 71,665,66547,346,576 - 47,347,635
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG667377, LOC667385
Downstream geneLOC100041459
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-139G24.bB6Ng01-139G24.g
ACCDH938418DH938419
length9461,059
definitionDH938418|Mus musculus domesticus DNA, BAC clone: B6Ng01-139G24, 5' end.DH938419|Mus musculus domesticus DNA, BAC clone: B6Ng01-139G24, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(71,665,106 - 71,665,665)(47,346,576 - 47,347,635)
sequence
gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaatgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atctctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatatgttcttggattcggttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttgggt
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtatcttctacttctattttgtgaaatagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctcggctttttttggctgggagactattaataactgcttctatttct
ttaggtgatatgggactgtttagatggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggtttccca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttctggatctgttgttatgtctcccttttcatttctgattttgttaat
taggattttgtccctgtgccctctagtgagtctagttaagggtttatcta
tcttgttgattttctcaaagaaccaactcctcgtttggttaattctttga
atagttcttcttgttttcacttggttgatttcacccctgagtttgattat
ttcctgccgtctactcctcttgggtgaatttgcttcctttttttctagag
cttttagatgtgttgtcaagctgctagtatgtgctctctcccgttt
gaattccagaaaggaaaaggtctcaggtgctggatggggaccacactagg
tcacaggcaacacttgtaaatgagagacaggggtggcagtgacctccccc
cacccccaggccagtattctacaaactaaaagaaaataaaggatgggacc
tggaaagagaatccagcacaggagccctgatctagcttctgctgcagata
ttcattcagtaactagttacaactcttaattataaaattctcatttaggg
aaactgaaaaataatttaagagaaggtgtatataatccctacttggtaag
aagagtgacaacgcttccaggaacccaagcaagatagaatgaggagtggc
cactagtgcatgggaatgacagtatttgtgatggacaacagcccaggaag
gataaatgcgggagaatgaggctctaagggacatgagcaggactgcatta
tcagagaagttctctccatcttcaaaatgactcagcagggctctcaatac
tcgcatttgtggcaaaagtaatttgccttttccacctgtgctgtgatgac
ctgctatgtggctgtttgggcaacagaagcctcaagggatcttgaatggg
tattgagccatcagaggaagatgagatgaaggtgggaagttcagtaatgg
tatttaattctgagacatatgaaaaatgggtcccttccccttgataaacc
tcactgttccccctgcaggaatacgcatgaatcattccagagcccatcac
aggaacaatgttcagtggagagcaaaggtgcaacttaatgaatgcaagtt
gcaaatgatcagagtgactgaaagatcagaacttcagggatggaggatag
tgttagcagggataggccctgcaaccatgttgcttacctgttacactgcc
catgtgtggatggagcagtagtaatgagtgtagcagctagccatgcttga
tgcttggatgcttcgatgcttgtatctcagtaacccaatggatcaaggct
gactaaccagagctttatccctgaagtggttgaccagaccaccttatgct
ggagcactg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_71665106_71665665
seq2: B6Ng01-139G24.b_47_606 (reverse)

seq1  CCAGGTACCAAAGTTGAATCAGGATCAAGTTGACCATCTAAACAGTCCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTACCAAAGTTGAATCAGGATCAAGTTGACCATCTAAACAGTCCCA  50

seq1  TATCACCAAAAGAAATAGAAGCAGTTATTAATAGTCTCCCAACCAAAAAA  100
      ||||||| ||||||||||||||||||||||||||||||||| ||||||||
seq2  TATCACCTAAAGAAATAGAAGCAGTTATTAATAGTCTCCCAGCCAAAAAA  100

seq1  AGCCCAGGACCAGATGGGTTTAGTGCAGAGTTCTATCAGACCTTCAAAGA  150
      |||| ||||||||| |||||||||||||||||||||||||||||||||||
seq2  AGCCGAGGACCAGACGGGTTTAGTGCAGAGTTCTATCAGACCTTCAAAGA  150

seq1  AGATCTAATTCCAATTCTGCACAAACTATTTCACAAAATAGAAGTAGAAG  200
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  AGATCTAATTCCAGTTCTGCACAAACTATTTCACAAAATAGAAGTAGAAG  200

seq1  GTACTCTACCCAACTCATTTTATGAAGCCACTATTACTCTGATACCTAAA  250
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTCTACCCAACTCATTTTATGAAGCCACTATTACTCTGATACCTAAA  250

seq1  CCACAGAAAGATCCAACAAAGATAGAGAACTTCAGACCAATTTCTCTTAT  300
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CCACAGAAAGACCCAACAAAGATAGAGAACTTCAGACCAATTTCTCTTAT  300

seq1  GAATATCGATGCAAAAATCCTCAATAAAATTCTCGCTAACCGAATCCAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATCGATGCAAAAATCCTCAATAAAATTCTCGCTAACCGAATCCAAG  350

seq1  AACACATTAAAGCAATCATCCATCCTGACCAAGTAGGTTTTATTCCAGGG  400
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATATTAAAGCAATCATCCATCCTGACCAAGTAGGTTTTATTCCAGGG  400

seq1  ATGCAGGGATGGTTTAATATACGAAAATCCATCAATGTAATCCATTATAT  450
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGAGATGGTTTAATATACGAAAATCCATCAATGTAATCCATTATAT  450

seq1  AAACAAACTCAAAGACAAAAACCACATGATCATCTCGTTAGATGCAGAAA  500
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AAACAAACTCAAAGACAAAAACCACATGATCATCTCATTAGATGCAGAAA  500

seq1  AAGCATTTGACAAGATCCAACACCCATTCATGATAAAAGTTTTGGAAAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATTTGACAAGATCCAACACCCATTCATGATAAAAGTTTTGGAAAGA  550

seq1  TCAGGAATTC  560
      ||||||||||
seq2  TCAGGAATTC  560

seq1: chr7_47346576_47347635
seq2: B6Ng01-139G24.g_66_1124 (reverse)

seq1  CAGTGCTCCAGCAT-AGGTGGTCTGTGTCAATCACCTCAGGGATAAAGCT  49
      |||||||||||||| |||||||||| ||||| ||| ||||||||||||||
seq2  CAGTGCTCCAGCATAAGGTGGTCTG-GTCAACCACTTCAGGGATAAAGCT  49

seq1  CTGGTTAGTCAGCACTTGATCATTTGGGTTACTGAGATACAAGCATCGAA  99
      ||||||||||||| |||||||  |||||||||||||||||||||||||||
seq2  CTGGTTAGTCAGC-CTTGATCCATTGGGTTACTGAGATACAAGCATCGAA  98

seq1  GCATCCAAGCATCCAAGCATGGCTAGCTGCTACACTCATTACTACTGCTC  149
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GCATCCAAGCAT-CAAGCATGGCTAGCTGCTACACTCATTACTACTGCTC  147

seq1  CATCCACACATGGGCAGTGTAACAGGTAAGCAACATGGTTGCA-GGCCTA  198
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CATCCACACATGGGCAGTGTAACAGGTAAGCAACATGGTTGCAGGGCCTA  197

seq1  TCCCTGCTAACACTATCCTCCATCCCTGAAGTTCTGATCTTTCAGTCACT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGCTAACACTATCCTCCATCCCTGAAGTTCTGATCTTTCAGTCACT  247

seq1  CTGATCATTTGCAACTTGCATTCATTAAGTTGCACCTTTGCTCTCCACTG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATCATTTGCAACTTGCATTCATTAAGTTGCACCTTTGCTCTCCACTG  297

seq1  AACATTGTTCCTGTGATGGGCTCTGGAATGATTCATGCGTATTCCTGCAG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTGTTCCTGTGATGGGCTCTGGAATGATTCATGCGTATTCCTGCAG  347

seq1  GGGGAACAGTGAGGTTTATCAAGGGGAAGGGACCCATTTTTCATATGTCT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAACAGTGAGGTTTATCAAGGGGAAGGGACCCATTTTTCATATGTCT  397

seq1  CAGAATTAAATACCATTACTGAACTTCCCACCTTCATCTCATCTTCCTCT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATTAAATACCATTACTGAACTTCCCACCTTCATCTCATCTTCCTCT  447

seq1  GATGGCTCAATACCCATTCAAGATCCCTTGAGGCTTCTGTTGCCCAAACA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCTCAATACCCATTCAAGATCCCTTGAGGCTTCTGTTGCCCAAACA  497

seq1  GCCACATAGCAGGTCATCACAGCACAGGTGGAAAAGGCAAATTACTTTTG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACATAGCAGGTCATCACAGCACAGGTGGAAAAGGCAAATTACTTTTG  547

seq1  CCACAAATGCGAGTATTGAGAGCCCTGCTGAGTCATTTTGAAGATGGAGA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAAATGCGAGTATTGAGAGCCCTGCTGAGTCATTTTGAAGATGGAGA  597

seq1  GAACTTCTCTGATAATGCAGTCCTGCTCATGTCCCTTAGAGCCTCATTCT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTCTCTGATAATGCAGTCCTGCTCATGTCCCTTAGAGCCTCATTCT  647

seq1  CCCGCATTTATCCTTCCTGGGCTGTTGTCCATCACAAATACTGTCATTCC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGCATTTATCCTTCCTGGGCTGTTGTCCATCACAAATACTGTCATTCC  697

seq1  CATGCACTAGTGGCCACTCCTCATTCTATCTTGCTTGGGTTCCTGGAAGC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCACTAGTGGCCACTCCTCATTCTATCTTGCTTGGGTTCCTGGAAGC  747

seq1  GTTGTCACTCTTCTTACCAAGTAGGGATTATATACACCTTCTCTTAAATT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTCACTCTTCTTACCAAGTAGGGATTATATACACCTTCTCTTAAATT  797

seq1  ATTTTTCAGTTTCCCTAAATGAGAATTTTATAATTAAGAGTTGTAACTAG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTCAGTTTCCCTAAATGAGAATTTTATAATTAAGAGTTGTAACTAG  847

seq1  TTACTGAATGAATATCTGCAGCAGAAGCTAGATCAGGGCTCCTGTGCTGG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGAATGAATATCTGCAGCAGAAGCTAGATCAGGGCTCCTGTGCTGG  897

seq1  ATTCTCTTTCCAGGTCCCATCCTTTATTTTCTTTTAGTTTGTAGAATACT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCTTTCCAGGTCCCATCCTTTATTTTCTTTTAGTTTGTAGAATACT  947

seq1  GGCCTGGGGGTGGGGGGAGGTCACTGCCACCCCTGTCTCTCATTTACAAG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTGGGGGTGGGGGGAGGTCACTGCCACCCCTGTCTCTCATTTACAAG  997

seq1  TGTTGCCTGTGACCTAGTGTGGTCCCCATCCAGCACCTGAGACCTTTTCC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGCCTGTGACCTAGTGTGGTCCCCATCCAGCACCTGAGACCTTTTCC  1047

seq1  TTTCTGGAATTC  1060
      ||||||||||||
seq2  TTTCTGGAATTC  1059