MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-140K13
Chromosome	3 (Build37)
Map Location	42,294,082 - 42,295,248
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC100039115, Phf17, Sclt1, D3Ertd751e, LOC666031
Downstream gene	LOC100039204, LOC100039219, LOC677788
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100039115 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039115
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Phf17 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:269424 MGI:1925835
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sclt1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67161 MGI:1914411
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	D3Ertd751e (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73852 MGI:1289213
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666031 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666031
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 1323 ESTs, 42 Proteins pseudo : _no_value

name	LOC100039204 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039204
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 1 Protein pseudo : _no_value

name	LOC100039219 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039219
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins

name	LOC677788 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:677788
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 4 Proteins pseudo : _no_value

name	LOC100039115 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149251112 GeneID:100039115
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100039115 transcript_id : XM_001472469.1

name	Phf17 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40556383 GeneID:269424 MGI:1925835
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : PHD finger protein 17 transcript_id : NM_172303.3

name	Sclt1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487196 GeneID:67161 MGI:1914411
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sodium channel and clathrin linker 1 transcript_id : NM_001081411.1

name	D3Ertd751e (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803383 GeneID:73852 MGI:1289213
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DNA segment, Chr 3, ERATO Doi 751, expressed transcript_id : NM_028667.2

name	LOC100039219 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149251116 GeneID:100039219
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins product : similar to CG2839-PA transcript_id : XM_001472478.1

name	LOC100039115 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149251113 GeneID:100039115
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472519.1

name	Phf17 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40556384 CCDS:CCDS17331.1 GeneID:269424 MGI:1925835
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005634 - nucleus [Evidence ISS] GO_function : GO:0005515 - protein binding [Evidence ISS]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence ISS]; GO:0030308 - negative regulation of cell growth [Evidence ISS]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006950 - response to stress [Evidence ISS] codon_start : 1 note : Jade1 PHD finger protein product : PHD zinc finger protein Jade1 protein_id : NP_758507.3

name	Sclt1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487197 GeneID:67161 MGI:1914411
definition	codon_start : 1 product : sodium channel associated protein 1 protein_id : NP_001074880.1

name	D3Ertd751e (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21735463 CCDS:CCDS17332.1 GeneID:73852 MGI:1289213
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC73852 protein_id : NP_082943.1

name	LOC100039219 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149251117 GeneID:100039219
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472528.1

name	LOC666031 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149251114 GeneID:666031
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 1323 ESTs, 42 Proteins product : similar to heat shock protein 70 cognate pseudo : _no_value transcript_id : XR_030775.1

name	LOC100039204 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149251115 GeneID:100039204
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 1 Protein product : hypothetical protein LOC100039204 pseudo : _no_value transcript_id : XR_030788.1

name	LOC677788 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149251118 GeneID:677788
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 4 Proteins product : similar to protein-tyrosine-phosphatase pseudo : _no_value transcript_id : XR_030799.1

clone name	MSMg01-496E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-534N06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-098C11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-402G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-291O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340A12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-265F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-469B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-542A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-055N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-298N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-205M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-213F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-441B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-353A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-169C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-207B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-534I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132A11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-148I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-497G07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-142J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-480P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340O04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-050A02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-101I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-236P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-205E22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-360L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-049K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-100F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-156H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122H12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520P24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-098H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-056M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-053E21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-046C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-525O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-464N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-051P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-522J21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-166F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376D08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-307K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-402K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-160J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-468M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-439A12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-451N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-159C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516B13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-469A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-107A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-110N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-436M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061A24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-058N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-135I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-105I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-504E15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-364I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-121D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-303P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-471J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537G05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-489H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-184G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433D23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-197I09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-278I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-297D07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-049K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-439O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-206D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261B24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344P07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-217M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239O15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-243O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283N03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-265H22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347B09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077L08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008L05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248K23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258A18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-051F17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140K13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-237M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189P17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180H17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-267G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308H05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-143O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095H17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-345B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028D12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-321H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-017B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159J20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139G14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-310B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-155F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-203N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028L22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-320E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287G07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-330G22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-323I06
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-140K13.b	B6Ng01-140K13.g
ACC	DH939326	DH939327
length	1,122	1,170
definition	DH939326\|Mus musculus domesticus DNA, BAC clone: B6Ng01-140K13, 5' end.	DH939327\|Mus musculus domesticus DNA, BAC clone: B6Ng01-140K13, 3' end.
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattcatttagttttacattaaccagtgtccattttagtacaagatgag aataacattcttttgccacatcatcaacttttaaaggatccatcttcgct aataaaacaaagtggaggtttgtgtcaattagctaaataattggagcaaa gactgaaattttttgtgtgctcccctcccacccccacccagcattagtaa ggtataattgacaaataaaatgggattcatgatgcctaatttcctgtgtt gatatacctgtgcattgttgaaatgattaccaccatcaagctaattaatg tgtctatcagctggactgcagtgttacagtggagctgttgccacggggac catggcattctgaaagctcatttccatttccatttgcagtctttcaatgg tcagaggaccttccttgaatgaatttgggtagaatgttgctataacagtt acaaagttaatcgtgtgcactcaataaatttaaggtggctcttttattta aaattcaacaagcaaataaaaactgtaattatgatatctgaagatatctc actcctagccacaatcaatgacaaatgtacttaaattcctctatctctcc tccttagcatttagaaccttccttaagctgtcttaacatgtgattgactg tggttatagtttagtaccctgtgctatcctttatttatccctcccctttt tgtagttttgaatttctttgtttataggattaaaaatatgctgttgtcac accatttgaataatggttatggaatgagttgtggtaaaagtcaaaagatt tattaacttattttttcatttcttaaagccattaagaaatatcctagtaa aatacttagaaatagttttaaagtggacctctatcccttgaaatgaatac aggaccttttcctataaaattcttcatgagaaatttcagcctttcaatgg atctgaggtctcagattatgcgtctctgtgctaaatatgtctgagtgaaa atactaaatgagaaacgatggcttatgactttttctgaaatgctaagctg aatctactggatatctaaattaatttagatgccaatctctattgataaat agagacataacttgcaggctac	gaattctcacctgaggaatactgaatggcagagaagcacctgaaaaaatg ttcaacatgcttaatcatcagggaaatgcaagtcaaaacaaccctgagat tccacctcacatcagtcagaatggctaaggtcaaaaattcaggtgacagc agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca gaaaattggacatagtactaccagaggatccagcaatacctctcctgggc atatatccagaagatgtcccaactggtaagaaggacacatgctccactat gttcatagcagccttatttataatagccacaagctggaaggaacccagat gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg gagtactactcagctattaaaaagaatgattttatgaaattcctagccaa atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc taggatacccaagatataagatacaatttgctaaacacatgaaactcaag aagaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa caaaaaacccatgggaaagagttacagagacaaagtttggagctgagatg aaaggatggaccatgtagagactgccatatccagggatccaccccataat cagcatccaaacgctgacaccattgcatatactaggaagattttatcaaa aggacctagattgtacttgtctcttgtgagataatgccggggcctagcaa acacagaagtggatgctcacagtcagcttatggatggatacaaggttccc aatggaggatctaggaaagtactcaaggagctaaagggatctgcaactct ataggaggacaacattatgatctaaccagtaccccaaaactctggactct gctgcatggattaaaaatgggcctatcggctacaccgtaagaaaggccct tggacgtaaaccttattgtcccctaaggaatgctgtccaaaatatgggaa tattgagtgaagttggggac
quality values	Open. Hide. 61 47 35 29 61 38 31 47 61 61 47 47 61 61 61 61 52 55 36 61 55 59 61 61 59 11 14 16 27 18 13 14 14 21 23 44 55 59 59 59 61 61 59 61 61 61 59 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 59 36 27 30 28 26 35 59 61 61 61 61 61 61 61 61 61 59 59 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 59 61 59 59 61 59 59 59 61 61 61 61 61 59 59 61 61 61 61 59 59 61 61 61 59 61 59 55 59 59 59 59 55 59 59 59 59 59 59 59 59 61 61 59 61 59 59 55 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 44 44 44 59 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 61 61 61 61 61 61 59 61 61 61 61 61 59 59 59 61 61 61 61 61 59 59 61 61 59 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 59 61 59 59 61 61 61 61 61 61 61 61 61 59 61 59 59 59 59 59 61 61 61 59 61 61 59 61 61 61 59 52 59 59 59 52 59 61 55 44 55 61 61 61 61 61 61 61 55 61 55 61 55 55 52 52 49 55 61 61 61 61 52 52 52 55 55 55 61 61 61 61 61 61 61 61 61 61 55 61 39 52 34 34 43 43 52 52 55 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 55 55 61 61 61 35 55 61 61 61 61 55 61 55 61 50 55 61 55 61 55 50 55 55 55 50 55 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 52 61 61 61 61 61 50 43 43 47 43 50 50 50 50 53 61 61 61 61 35 42 50 50 50 53 61 61 61 61 61 61 61 61 61 50 53 61 53 61 61 61 61 61 61 45 52 47 53 61 53 61 50 46 47 47 47 53 45 47 30 47 53 33 53 53 50 47 53 53 61 61 61 53 61 61 61 61 45 50 53 53 47 57 57 53 53 53 42 47 53 53 57 57 53 53 53 50 50 42 47 47 30 39 27 43 53 45 46 45 47 57 52 50 42 53 53 26 47 43 52 50 50 50 50 50 53 38 53 53 53 42 45 53 42 47 53 53 33 52 57 52 53 47 30 57 57 52 36 47 57 45 57 57 45 50 53 37 52 47 45 57 30 53 53 40 42 53 57 41 32 57 50 52 43 50 45 45 52 53 36 46 46 53 53 53 37 37 47 35 33 43 50 30 47 26 34 45 57 57 57 53 57 30 38 32 30 57 46 57 31 47 50 37 57 52 40 53 57 57 34 24 57 44 38 36 47 43 43 34 24 52 33 57 57 57 52 40 40 40 41 37 48 53 41 52 45 37 21 24 38 32 33 37 30 43 57 46 33 42 42 34 20 52 44 53 37 30 32 37 37 53 53 35 28 26 37 40 28 29 47 47 24 57 17 10 35 57 57 44 28 37 30 34 57 51 41 20 29 12 51 34 32 24 32 25 44 39 35 39 40 46 47 51 45 46 32 30 20 22 51 47 28 27 30 27 33 29 37 25 34 20 29 29 27 30 24 51 51 45 33 20 31 31 28 35 39 20 28 36 43 51 21 19 25 25 29 27 8 7 9 37 30 15 29 14 14 20 21 21 18 51 30 29 28 28 27 14 9 28 31 26 27 13 13 27 25 30 12 31 29 26 51 23 20 29 25 21 22 51 16 20 28 23 28 17 20 24 51 51 13 19 19 17 21 20 16 41 38 23 28 21 14 5 30 20 19 21 22 23 15 31 36 29 15 28 21 8 6 12 32 24 16 38 23 20 7 10 19 8 8 29 13 15 27 15 36 8 9 11 5 10 20 9 9 12 4 6 4 6 6 5 6 4 10 6 33 8 7 5 15 9 4 6 33 18 30 7 9 32 13 17 13 13 10 3 3 11 26 33 30 8 5 4 23 6 7 10 7 3 4 5 4 8 17 8 4 3 6 8 5 5 5 16 13 22 8 24 13 6 6 22 20 26 6 5 20 20 7 26 24 4 5 5 10 21 24 10 26 24 24 6 3 2 3 3 2 4 3 4 9 5 9 4 7 4 3 15 25 5 14 18 7 18 4 22 6 4 7 7 3 7 6 13 7 4 20 8 8 1 1 6 3 8 14 9 3 5 24 6 5 6 7 5 3 6 7 15 6 18 7 11 12 9 9 9 6 16 10 5 10 6 8	Open. Hide. 47 61 52 47 61 10 11 15 6 10 9 28 14 25 41 55 55 49 49 52 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 59 59 38 36 40 30 21 28 26 45 59 61 61 61 61 61 61 61 61 61 61 59 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 59 61 61 61 61 59 61 55 59 61 59 61 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 52 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 61 61 61 61 61 61 59 61 59 59 59 61 61 59 59 59 59 59 59 59 59 45 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 59 61 59 61 59 59 59 61 59 59 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 59 59 59 59 59 59 61 59 61 61 61 61 61 61 61 59 61 61 59 61 61 59 59 61 61 61 61 61 61 61 59 61 59 59 59 61 61 61 59 43 59 61 59 59 59 61 61 61 61 59 59 59 59 61 59 59 59 61 61 59 61 52 59 59 59 52 52 61 59 59 61 61 61 59 59 61 59 59 59 61 61 61 61 59 59 59 59 59 59 59 61 61 61 59 61 59 61 61 61 59 55 59 59 55 55 55 61 61 55 55 55 55 55 55 55 61 43 43 52 52 52 52 61 61 61 61 61 61 61 61 61 55 52 55 61 55 61 52 55 61 43 52 52 50 52 49 49 61 52 52 43 43 52 39 52 61 52 55 43 37 49 49 43 49 43 49 52 41 52 61 52 61 61 55 61 61 50 50 49 43 50 32 37 61 61 61 61 61 61 61 61 47 49 50 55 50 55 55 55 50 61 50 55 47 55 55 61 55 61 50 55 55 50 50 50 43 43 49 29 27 43 55 55 61 61 61 61 61 61 61 43 61 55 61 61 61 61 61 61 61 53 61 61 61 61 53 53 53 52 50 47 52 35 43 47 43 50 43 53 61 50 50 53 61 61 61 47 61 53 61 37 30 50 61 50 42 50 52 53 31 37 50 47 50 50 53 53 61 61 47 31 61 24 50 42 50 35 50 45 53 50 61 50 53 50 50 50 50 61 61 33 47 43 47 39 43 39 61 50 61 61 61 61 53 50 50 61 53 50 34 39 32 47 45 45 53 61 47 52 61 61 53 52 52 53 61 61 28 32 38 43 21 34 38 22 27 42 17 38 39 47 32 27 32 42 28 31 31 28 47 53 35 50 39 53 57 47 46 50 47 29 8 47 47 29 29 43 31 39 19 13 34 45 38 45 17 38 38 45 38 38 45 45 30 20 47 38 53 53 27 57 34 35 36 36 42 26 46 26 42 47 50 47 42 42 52 24 53 26 45 42 20 38 41 45 45 33 28 24 24 21 28 20 33 30 25 33 32 57 24 17 30 37 53 52 29 37 39 10 37 45 53 33 42 27 33 45 34 32 14 46 16 43 46 41 37 37 24 34 30 28 32 28 31 43 24 27 28 27 38 32 22 38 35 34 52 42 52 14 17 19 27 52 8 23 21 38 53 47 23 5 46 15 15 46 46 20 19 52 23 17 35 36 40 21 53 25 26 25 36 42 19 38 27 20 27 35 18 24 16 19 57 46 18 27 29 35 21 37 38 35 23 20 28 23 26 10 23 27 22 18 32 27 16 20 15 37 33 25 16 24 42 37 28 11 5 20 23 21 22 53 39 14 26 31 20 37 29 37 21 11 11 7 13 31 8 16 11 45 53 35 24 27 12 5 44 53 17 10 29 22 20 20 7 29 31 20 9 14 19 22 7 8 12 21 26 23 23 13 17 22 23 27 17 15 14 8 26 14 6 8 20 25 16 19 16 26 29 14 23 18 10 16 9 22 27 45 21 21 9 22 9 20 12 30 16 17 23 29 24 17 28 18 21 25 14 27 17 16 28 28 14 28 21 26 9 31 11 17 18 25 15 28 27 14 8 4 8 6 11 11 19 7 15 10 28 24 13 22 13 28 26 26 29 6 17 5 8 12 7 5 4 5 16 8 7 7 5 7 5 13 27 18 27 23 29 8 7 26 34 41 29 25 46 32 16 29 15 28 27 29 6 8 14 5 6 7 6 11 5 25 16 19 8 21 32 11 9 11 30 12 41 23 19 12 13 11 6 21 13 14 17 27 23 20 6 5 4 6 5 11 8 12 5 11 10 13 15 15 20 11 14 16 10 11 8 10 7 8 17 22 6 6 5 6 14 14 8 6 5 25 28 21 10 13 7 34 20 21 10 10 22 9 10 21 8 7 7 12 6 5 12 7 5 20 11 9 6 18 4 4 4 8 17 11 16 13 9 6 4 4 5 4 4 8 6 8 12 4 14 5 6 13 9 4 8 19 29 5 6 3 3 5 19 15 11 3 3 4 4 4 7 4 5 8 5 9 29 25 9 15 14 10 11 18 7 6 4 7 6 6 1 2 4 4 5 16 6 18 9 6 3 7 26 27 4 3

Alignment Information

BAC End 1

BAC End 2

seq1: chr3_42294082_42295248
seq2: B6Ng01-140K13.b_46_1167

seq1  GAATTCATTTAGTTTTACATTAACCAGTGTCCATTTTAGTACAAGATGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTAGTTTTACATTAACCAGTGTCCATTTTAGTACAAGATGAG  50

seq1  AATAACATTCTTTTGCCACATCATCAACTTTTAAAGGATCCATCTTCGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACATTCTTTTGCCACATCATCAACTTTTAAAGGATCCATCTTCGCT  100

seq1  AATAAAACAAAGTGGAGGTTTGTGTCAATTAGCTAAATAATTGGAGCAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAACAAAGTGGAGGTTTGTGTCAATTAGCTAAATAATTGGAGCAAA  150

seq1  GACTGAAATTTTTTGTGTGCTCCCCTCCCACCCCCACCCAGCATTAGTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGAAATTTTTTGTGTGCTCCCCTCCCACCCCCACCCAGCATTAGTAA  200

seq1  GGTATAATTGACAAATAAAATGGGATTCATGATGCCTAATTTCCTGTGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATAATTGACAAATAAAATGGGATTCATGATGCCTAATTTCCTGTGTT  250

seq1  GATATACCTGTGCATTGTTGAAATGATTACCACCATCAAGCTAATTAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATACCTGTGCATTGTTGAAATGATTACCACCATCAAGCTAATTAATG  300

seq1  TGTCTATCAGCTGGACTGCAGTGTTACAGTGGAGCTGTTGCCACGGGGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTATCAGCTGGACTGCAGTGTTACAGTGGAGCTGTTGCCACGGGGAC  350

seq1  CATGGCATTCTGAAAGCTCATTTCCATTTCCATTTGCAGTCTTTCAATGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGCATTCTGAAAGCTCATTTCCATTTCCATTTGCAGTCTTTCAATGG  400

seq1  TCAGAGGACCTTCCTTGAATGAATTTGGGTAGAATGTTGCTATAACAGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGGACCTTCCTTGAATGAATTTGGGTAGAATGTTGCTATAACAGTT  450

seq1  ACAAAGTTAATCGTGTGCACTCAATAAATTTAAGGTGGCTCTTTTATTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGTTAATCGTGTGCACTCAATAAATTTAAGGTGGCTCTTTTATTTA  500

seq1  AAATTCAACAAGCAAATAAAAACTGTAATTATGATATCTGAAGATATCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCAACAAGCAAATAAAAACTGTAATTATGATATCTGAAGATATCTC  550

seq1  ACTCCTAGCCACAATCAATGACAAATGTACTTAAATTCCTCTATCTCTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCTAGCCACAATCAATGACAAATGTACTTAAATTCCTCTATCTCTCC  600

seq1  TCCTTAGCATTTAGAACCTTCCTTAAGCTGTCTTAACATGTGATTGACTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTAGCATTTAGAACCTTCCTTAAGCTGTCTTAACATGTGATTGACTG  650

seq1  TGGTTATAGTTTAGTACCCTGTGCTATCCTTTATTTATCCCTCCCCTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTATAGTTTAGTACCCTGTGCTATCCTTTATTTATCCCTCCCCTTTT  700

seq1  TGTAGTTTTGAATTTCTTTGTTTATAGGATTAAAAATATGCTGTTGTCAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTTTTGAATTTCTTTGTTTATAGGATTAAAAATATGCTGTTGTCAC  750

seq1  ACCATTTGAATAATGGTTATGGAATGAGTTGTGGTAAAAGTCAAAAGATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTTGAATAATGGTTATGGAATGAGTTGTGGTAAAAGTCAAAAGATT  800

seq1  TATTAACTTATTTTTTCATTTCTTAAAGCCATTAAGAAAATATCCTAGTA  850
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TATTAACTTATTTTTTCATTTCTTAAAGCCATTAAG-AAATATCCTAGTA  849

seq1  AAATACTTAGGAAATAGTTTTAAAGTGGACCTCTATCCCTTGAAATGAAT  900
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  AAATACTTA-GAAATAGTTTTAAAGTGGACCTCTATCCCTTGAAATGAAT  898

seq1  AACAGGACCTTTTCCTATAAAATTCTTCATGAGAAATTTCAGCCTTTCCA  950
       |||||||||||||||||||||||||||||||||||||||||||||||  
seq2  -ACAGGACCTTTTCCTATAAAATTCTTCATGAGAAATTTCAGCCTTTC--  945

seq1  ATTGAATCTGAAGTTCTCAGAATTCATGCGCCCCTGTGCTAAAATTATGT  1000
      | || ||||| || |||||||  | ||||| | ||||||||||  |||||
seq2  AATGGATCTG-AGGTCTCAGA--TTATGCGTCTCTGTGCTAAA--TATGT  990

seq1  CTGAAGTGAAAAATACCTAAAATTGTAGATAACCAGATGCTTAATGATCT  1050
      ||| |||| |||||| |||||  || ||| |||  ||||  | |||| ||
seq2  CTG-AGTG-AAAATA-CTAAA--TG-AGA-AAC--GATGGCTTATGA-CT  1030

seq1  TTTCTTGATAATGTCATAAGCTTGACATCTATCCTGTGATTGTCTAAATT  1100
      |||  ||| ||||   ||||| ||| |||||  ||| || | ||||||||
seq2  TTTTCTGA-AATG--CTAAGC-TGA-ATCTA--CTG-GA-TATCTAAATT  1071

seq1  TTAATATTTAGTAATGCCCAATTTCTTAAATATGAATAAAAATGAGAAAC  1150
           ||||||  ||| ||||| ||     |||  ||||| | ||||   
seq2  ----AATTTAG--ATG-CCAATCTC-----TATTGATAAATA-GAGA---  1105

seq1  AATAACTTGCAGGCTAC  1167
       ||||||||||||||||
seq2  CATAACTTGCAGGCTAC  1122

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information