BAC Information

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BAC

Clone NameB6Ng01-141H09
Chromosome3 (Build37)
Map Location 118,192,244 - 118,305,835
singlet/doubletdoublet
Overlap geneDpyd
Upstream gene4833424O15Rik, EG668759, Snx7, LOC100043260
Downstream geneLOC100043275
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-141H09.bB6Ng01-141H09.g
ACCDH939914DH939915
length1,077660
definitionDH939914|Mus musculus domesticus DNA, BAC clone: B6Ng01-141H09, 5' end.DH939915|Mus musculus domesticus DNA, BAC clone: B6Ng01-141H09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(118,192,244 - 118,193,326)(118,305,179 - 118,305,835)
sequence
gaattctaagcaattgttgcatgctggtccctggacaataatataaagct
ggcaaagtttgtattcaagatgaccttcaacctctaattttttttaactt
ttctgacctgatgactctgctcccaggcatccagagatttggagatgtgc
actgagtataaggaagaaaaaaaaagcaactctctgatatggagcaagct
aaagctcttcctcccttcaagccatgtaacagtgtggatcggagataatt
tccctgcacttagcctcctaggtgtaaatttagactaatagtgactctcc
tgttaggggaatcacacaggctacatgaaagcatgctcagcaatctatat
aacattcaatagataattgatactgctcaaaattgccttaaaattgggga
ccctaaagcccacgttaccctgaaatacctgactcaaaccactttggttt
ctttatccagttccccatcttgtcttacaatgatcagaactgaacacaac
ctgactattatccaaacttattaactttcagataaaattccttgtatatg
tataaacaccttactgttttgtctttctaagaaggtgtctgtctttctct
tagcagttatgtatttcaaatttacaacaaagcagcaaatttacctctcc
taacagcgttttggggtttttctaacacacacacacacacacacacacac
acacacacacacacacacacacacacctctaagttattctacattccttc
tataaaccagctctaaaggcctaagggccacatgatcaaaatgttgagaa
caatgactacactttgctgtagattttctgtactagttacttttttcctt
gcggggaaaaagcaatttaatgaagaaatggtttatttgagatcagggtt
tgaagatgcttcaatcacaggagagcagtcatgatgcagccgtgtgggag
aaccaaccattttggctctgaaatcaggaaacagttaaaaatgttagtga
tcacgttactcgtgacttatattcagtctgggaacccatcttggcatgcc
attactcacagttaggatggcccttgg
gaattctaaattacattcctcctaagaaatgaccaatgccaggtcctcac
cagggtcacagggttccctctctggataaattgaccacttcaagaaaccc
attaacccttcagacatcaagttactgctaatagacggagactcttctct
catcaaagactctggctttggattttccagtcagttatagaggattgtga
gaatggactggtgcacatggaagcagaaaaaaatagagtttgagtaaatt
acatagcatgattttttccgggggggggggggttgctaggaaataataaa
atatgatacaaacctactctacacaaaatccgaagaatcgtgtgctgtca
ctgccttctgtgagcattgcacacagaagtatttggacttcgagagcaca
tacacactgaaagtgttaagcctcatcctagagagtatcaagagcagaaa
tgttgactgcagtcatatacctactcttcctggagacaagtactattcac
tggtcataaaatgttggacctttagaatcatttaggagttcaaattccag
ttgcaggaagccatttggccaggcagtctttctttcttaacctgtgctaa
tatttatatgatcatattgattaactaaatatatcaagcttttcttcacc
atttacattg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_118192244_118193326
seq2: B6Ng01-141H09.b_47_1123

seq1  GAATTCTAAGCAATTGTTGCATGCTGGTCCCTGGACAATAATATAAAGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAGCAATTGTTGCATGCTGGTCCCTGGACAATAATATAAAGCT  50

seq1  GGCAAAGTTTGTATTCAAGATGACCTTCAACCTCTAATTTTTTTTAACTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAAGTTTGTATTCAAGATGACCTTCAACCTCTAATTTTTTTTAACTT  100

seq1  TTCTGACCTGATGACTCTGCTCCCAGGCATCCAGAGATTTGGAGATGTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGACCTGATGACTCTGCTCCCAGGCATCCAGAGATTTGGAGATGTGC  150

seq1  ACTGAGTATAAGGAAGAAAAAAAAAGCAACTCTCTGATATGGAGCAAGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGTATAAGGAAGAAAAAAAAAGCAACTCTCTGATATGGAGCAAGCT  200

seq1  AAAGCTCTTCCTCCCTTCAAGCCATGTAACAGTGTGGATCGGAGATAATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTCTTCCTCCCTTCAAGCCATGTAACAGTGTGGATCGGAGATAATT  250

seq1  TCCCTGCACTTAGCCTCCTAGGTGTAAATTTAGACTAATAGTGACTCTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGCACTTAGCCTCCTAGGTGTAAATTTAGACTAATAGTGACTCTCC  300

seq1  TGTTAGGGGAATCACACAGGCTACATGAAAGCATGCTCAGCAATCTATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAGGGGAATCACACAGGCTACATGAAAGCATGCTCAGCAATCTATAT  350

seq1  AACATTCAATAGATAATTGATACTGCTCAAAATTGCCTTAAAATTGGGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTCAATAGATAATTGATACTGCTCAAAATTGCCTTAAAATTGGGGA  400

seq1  CCCTAAAGCCCACGTTACCCTGAAATACCTGACTCAAACCACTTTGGTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAAAGCCCACGTTACCCTGAAATACCTGACTCAAACCACTTTGGTTT  450

seq1  CTTTATCCAGTTCCCCATCTTGTCTTACAATGATCAGAACTGAACACAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATCCAGTTCCCCATCTTGTCTTACAATGATCAGAACTGAACACAAC  500

seq1  CTGACTATTATCCAAACTTATTAACTTTCAGATAAAATTCCTTGTATATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTATTATCCAAACTTATTAACTTTCAGATAAAATTCCTTGTATATG  550

seq1  TATAAACACCTTACTGTTTTGTCTTTCTAAGAAGGTGTCTGTCTTTCTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAACACCTTACTGTTTTGTCTTTCTAAGAAGGTGTCTGTCTTTCTCT  600

seq1  TAGCAGTTATGTATTTCAAATTTACAACAAAGCAGCAAATTTACCTCTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGTTATGTATTTCAAATTTACAACAAAGCAGCAAATTTACCTCTCC  650

seq1  TAACAGCGTTTTGGGGTTTTTCTAACACACACACACACACACACACACAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGCGTTTTGGGGTTTTTCTAACACACACACACACACACACACACAC  700

seq1  ACACACACACACACACACACACACACCTCTAAGTTATTCTACATTCCTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACCTCTAAGTTATTCTACATTCCTTC  750

seq1  TATAAACCAGCTCTAAAGGCCTAAGGGCCACATGATCAAAATGTTGAGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAACCAGCTCTAAAGGCCTAAGGGCCACATGATCAAAATGTTGAGAA  800

seq1  CAATGACTACACTTTGCTGTAGATTTTCTGTACTAGTTACTTTTTTCCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGACTACACTTTGCTGTAGATTTTCTGTACTAGTTACTTTTTTCCTT  850

seq1  GCTGGGAAAAAGCAATTTAATGAAGAAATGGTTTATTTGAGATCAAGGTT  900
      || |||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GCGGGGAAAAAGCAATTTAATGAAGAAATGGTTTATTTGAGATCAGGGTT  900

seq1  TGAAGATGCTTCAATCACAGGAGAGCAGTCATGATGCAGCCGTGTGGGAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGATGCTTCAATCACAGGAGAGCAGTCATGATGCAGCCGTGTGGGAG  950

seq1  AACCAACCATTTTGCATCTGAATTCAGGAAACAGTTTTAAAAAATGTTAG  1000
      ||||||||||||||  |||||| |||||||||||||   |||||||||||
seq2  AACCAACCATTTTGGCTCTGAAATCAGGAAACAGTT---AAAAATGTTAG  997

seq1  TGATCACGTTACTCGTTGACTTATATTCAGTCTGGGAACCCAATCCTTGG  1050
      ||||||||||||||| ||||||||||||||||||||||||||   |||||
seq2  TGATCACGTTACTCG-TGACTTATATTCAGTCTGGGAACCCA--TCTTGG  1044

seq1  CATGCCATTACTCACAGTTAGGATGGCCCTTGG  1083
      |||||||||||||||||||||||||||||||||
seq2  CATGCCATTACTCACAGTTAGGATGGCCCTTGG  1077

seq1: chr3_118305179_118305835
seq2: B6Ng01-141H09.g_70_729 (reverse)

seq1  CAATGTAAATGGTGAAG-AAAGCTTGATATATTTAGTTAATCAATATGGT  49
      ||||||||||||||||| |||||||||||||||||||||||||||||| |
seq2  CAATGTAAATGGTGAAGAAAAGCTTGATATATTTAGTTAATCAATATGAT  50

seq1  CATATAAATATTAGCACAGGTTTAGAAAG-AAGACTGCCTGGCCAAATGG  98
      |||||||||||||||||||||| |||||| ||||||||||||||||||||
seq2  CATATAAATATTAGCACAGGTTAAGAAAGAAAGACTGCCTGGCCAAATGG  100

seq1  CTTCCTGCAACTGGAATTTGAACTCCTAAATGATTCTAAAGGTCCAACAT  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTGCAACTGGAATTTGAACTCCTAAATGATTCTAAAGGTCCAACAT  150

seq1  TTTATGACCAGTGAATAGTACTTGTCTCCAGGAAGAGTAGGTATATGACT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGACCAGTGAATAGTACTTGTCTCCAGGAAGAGTAGGTATATGACT  200

seq1  GCAGTCAACATTTCTGCTCTTGATACTCTCTAGGATGAGGCTTAACACTT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTCAACATTTCTGCTCTTGATACTCTCTAGGATGAGGCTTAACACTT  250

seq1  TCAGTGTGTATGTGCTCTCGAAGTCCAAATACTTCTGTGTGCAATGCTCA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGTGTATGTGCTCTCGAAGTCCAAATACTTCTGTGTGCAATGCTCA  300

seq1  CAGAAGGCAGTGACAGCACACGATTCTTCGGATTTTGTGTAGAGTAGGTT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGGCAGTGACAGCACACGATTCTTCGGATTTTGTGTAGAGTAGGTT  350

seq1  TGTATCATATTTTATTATTTCCTAGCAA-CCCCCCCCCCCCGGAAAAAAT  397
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TGTATCATATTTTATTATTTCCTAGCAACCCCCCCCCCCCCGGAAAAAAT  400

seq1  CATGCTATGTAATTTACTCAAACTCTATTTTTTTCTGCTTCCATGTGCAC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTATGTAATTTACTCAAACTCTATTTTTTTCTGCTTCCATGTGCAC  450

seq1  CAGTCCATTCTCACAATCCTCTATAACTGACTGGAAAATCCAAAGCCAGA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCCATTCTCACAATCCTCTATAACTGACTGGAAAATCCAAAGCCAGA  500

seq1  GTCTTTGATGAGAGAAGAGTCTCCGTCTATTAGCAGTAACTTGATGTCTG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTGATGAGAGAAGAGTCTCCGTCTATTAGCAGTAACTTGATGTCTG  550

seq1  AAGGGTTAATGGGTTTCTTGAAGTGGTCAATTTATCCAGAGAGGGAACCC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGTTAATGGGTTTCTTGAAGTGGTCAATTTATCCAGAGAGGGAACCC  600

seq1  TGTGACCCTGGTGAGGACCTGGCATTGGTCATTTCTTAGGAGGAATGTAA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACCCTGGTGAGGACCTGGCATTGGTCATTTCTTAGGAGGAATGTAA  650

seq1  TTTAGAATTC  657
      ||||||||||
seq2  TTTAGAATTC  660