BAC Information

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BAC

Clone NameB6Ng01-142H18
Chromosome3 (Build37)
Map Location 14,518,650 - 14,636,688
singlet/doubletdoublet
Overlap geneLOC668068, Lrrcc1, E2f5, 1810022K09Rik, LOC100039929
Upstream gene0710005M24Rik, LOC100041679, LOC100041667, LOC100039882, EG622229, LOC668062, Slc7a12
Downstream geneCar13, EG545507, Car1, LOC100041785, Car3, Car2, EG634323, LOC100039985, LOC751864, Sirpb1, LOC668101
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-142H18.bB6Ng01-142H18.g
ACCDH940672DH940673
length871337
definitionDH940672|Mus musculus domesticus DNA, BAC clone: B6Ng01-142H18, 5' end.DH940673|Mus musculus domesticus DNA, BAC clone: B6Ng01-142H18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(14,518,650 - 14,519,421)(14,636,352 - 14,636,688)
sequence
gaattctttgtttagctctgtaccccattatttaatgaggttactttatt
tttctggagtccagctatttagaagcatttttatgagtgtgtgaaatagt
tgaaatatttgtccatactacagtgtaaataaatattttatttattgtct
tctgtgaacatttataaaattcttatcttgcttcattggacattataata
aatagtgtagaggtcaggcatgcctttcttgttcctcttctgaggaagaa
aggaccaaatcactcaacagtaaatacaacatattttaaagtaactttat
tgaaacaagtaaaagacttacataattaaatatttcatgtctttgaaaga
aagagaaaaggaaagaaaggaaggaaggaaggaaggaaggaaggaaggaa
gaccagaagattttttaaaaatgttccatgctcatggatcagtaagatta
acatagcaaaaatggccatcctaccaaaacaaatctacacattcagttca
atagccaacaaaattccaacccatttttaacagatcttgaaaggtcaatc
taaaacaatctggaacaagagaagaaatgctagaagtcttcccattaatg
atttcaaattgtgctacagagctatagcaataaaaacttcatgatattag
cataaaggtagacacactgatagacagaattaaattgaggacatatacaa
atatccacatatatatgtcctcttgattcttgataaagaagtcagaaata
cacgctaagtgaaagacagcatcttaaacaaatggtatttgtcaaactgg
atgtttgcaggtagaagaatacaaatagatccatactgatcacaatgaac
aaaactcaagtccaaacatat
ttccttagatagtctgtttacttttccaaaattgcagtatgtttaatggg
gtgggtgggggtctcaaagtaccacccacaggagactggttagatatccc
aaagatctctgcatggtagtcagtcatccagttatgagcaatatgcatag
agccacgcatctcctgaacaatatggagtaagtcctgagacataataact
aagaggggaaaaagaagaaggcaaaagaatgtatataaagtatttgtttg
atggaaaaagagaaataaggtaatatactttagcactttagcaacatttt
gaaaaatgtgtgtgtgtgtgtgtgtgtgtgtgtgtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_14518650_14519421
seq2: B6Ng01-142H18.b_46_817

seq1  GAATTCTTTGTTTAGCTCTGTACCCCATTATTTAATGAGGTTACTTTATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTTAGCTCTGTACCCCATTATTTAATGAGGTTACTTTATT  50

seq1  TTTCTGGAGTCCAGCTATTTAGAAGCATTTTTATGAGTGTGTGAAATAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGGAGTCCAGCTATTTAGAAGCATTTTTATGAGTGTGTGAAATAGT  100

seq1  TGAAATATTTGTCCATACTACAGTGTAAATAAATATTTTATTTATTGTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATATTTGTCCATACTACAGTGTAAATAAATATTTTATTTATTGTCT  150

seq1  TCTGTGAACATTTATAAAATTCTTATCTTGCTTCATTGGACATTATAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGAACATTTATAAAATTCTTATCTTGCTTCATTGGACATTATAATA  200

seq1  AATAGTGTAGAGGTCAGGCATGCCTTTCTTGTTCCTCTTCTGAGGAAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTGTAGAGGTCAGGCATGCCTTTCTTGTTCCTCTTCTGAGGAAGAA  250

seq1  AGGACCAAATCACTCAACAGTAAATACAACATATTTTAAAGTAACTTTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACCAAATCACTCAACAGTAAATACAACATATTTTAAAGTAACTTTAT  300

seq1  TGAAACAAGTAAAAGACTTACATAATTAAATATTTCATGTCTTTGAAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACAAGTAAAAGACTTACATAATTAAATATTTCATGTCTTTGAAAGA  350

seq1  AAGAGAAAAGGAAAGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAAAAGGAAAGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA  400

seq1  GACCAGAAGATTTTTTAAAAATGTTCCATGCTCATGGATCAGTAAGATTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAGAAGATTTTTTAAAAATGTTCCATGCTCATGGATCAGTAAGATTA  450

seq1  ACATAGCAAAAATGGCCATCCTACCAAAACAAATCTACACATTCAGTTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGCAAAAATGGCCATCCTACCAAAACAAATCTACACATTCAGTTCA  500

seq1  ATAGCCAACAAAATTCCAACCCATTTTTAACAGATCTTGAAAGGTCAATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCCAACAAAATTCCAACCCATTTTTAACAGATCTTGAAAGGTCAATC  550

seq1  TAAAACAATCTGGAACAAGAGAAGAAATGCTAGAAGTCTTCCCATTAATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACAATCTGGAACAAGAGAAGAAATGCTAGAAGTCTTCCCATTAATG  600

seq1  ATTTCAAATTGTGCTACAGAGCTATAGCAATAAAAACTTCATGATATTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAAATTGTGCTACAGAGCTATAGCAATAAAAACTTCATGATATTAG  650

seq1  CATAAAGGTAGACACACTGATAGACAGAATTAAATTGAGGACATATACAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAGGTAGACACACTGATAGACAGAATTAAATTGAGGACATATACAA  700

seq1  ATATCCACATATATATGTCCTCTTGATTCTTGATAAAGAAGTCAGAAATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCCACATATATATGTCCTCTTGATTCTTGATAAAGAAGTCAGAAATA  750

seq1  CACGCTAAGTGAAAGACAGCAT  772
      ||||||||||||||||||||||
seq2  CACGCTAAGTGAAAGACAGCAT  772

seq1: chr3_14636352_14636688
seq2: B6Ng01-142H18.g_74_410 (reverse)

seq1  TCACACACACACACACACACACACACACACATTTTTCAAAATGTTGCTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACACACACACACACACACACACACACATTTTTCAAAATGTTGCTAA  50

seq1  AGTGCTAAAGTATATTACCTTATTTCTCTTTTTCCATCAAACAAATACTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTAAAGTATATTACCTTATTTCTCTTTTTCCATCAAACAAATACTT  100

seq1  TATATACATTCTTTTGCCTTCTTCTTTTTCCCCTCTTAGTTATTATGTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATACATTCTTTTGCCTTCTTCTTTTTCCCCTCTTAGTTATTATGTCT  150

seq1  CAGGACTTACTCCATATTGTTCAGGAGATGCGTGGCTCTATGCATATTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACTTACTCCATATTGTTCAGGAGATGCGTGGCTCTATGCATATTGC  200

seq1  TCATAACTGGATGACTGACTACCATGCAGAGATCTTTGGGATATCTAACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAACTGGATGACTGACTACCATGCAGAGATCTTTGGGATATCTAACC  250

seq1  AGTCTCCTGTGGGTGGTACTTTGAGACCCCCACCCACCCCATTAAACATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCCTGTGGGTGGTACTTTGAGACCCCCACCCACCCCATTAAACATA  300

seq1  CTGCAATTTTGGAAAAGTAAACAGACTATCTAAGGAA  337
      |||||||||||||||||||||||||||||||||||||
seq2  CTGCAATTTTGGAAAAGTAAACAGACTATCTAAGGAA  337