BAC Information

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BAC

Clone NameB6Ng01-142M08
Chromosome3 (Build37)
Map Location 111,336,598 - 111,337,704
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043190, LOC668712
Downstream geneLOC625585, EG229746, LOC668717
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-142M08.bB6Ng01-142M08.g
ACCDH940883DH940884
length1,092139
definitionDH940883|Mus musculus domesticus DNA, BAC clone: B6Ng01-142M08, 5' end.DH940884|Mus musculus domesticus DNA, BAC clone: B6Ng01-142M08, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaggaaaatggtttaacaacaaatgcttacaatttgagcatttt
taattaaaaaattcaaaataagcaaagtgtggcacatgtatggcacaggt
aaaaaatttcagaagattgtgaaactttgtttcatgtaaaaaattattta
aaatattgtacaaatttgtattcaggatataaaaataaggtgtttgtgaa
ggctaaataaattttattcaaaaagaaatgatagttaaaggatacttcat
tatatataaagaaaacttctaaactccaatatataaaaatatggctttct
gtgctaaaagtcttgaataaggatgttcaaaatatgcattcttatctaaa
ataacccaaatgtcaggaaagttcatactatagcttagaaaaataatatt
ggattaagttatctttttttttttttttgagaaaacttctcagaaaagtc
atcagagggaaaaaagtttactttgatcaaaagttctagggtattctagc
cagaataaaaaggcatagtggcagaatattgaggcaggtagtcacatttc
aactgtgatcaggaaactaaaagaattgaacactggtactctgctggctt
tttctcatgttgcttgagatcttagtacatagagtcagtactatagcaat
gatggaaattataacctcaggtagcattttgagaacatgctttttaaaat
tattattacacattttctttatttacatttcaattattatcccctttcct
agtttcccatctgaaaatcccctatctcctcccccctctccctgctctcc
aacctacccactcccattcctggtcctggaattcccctatactggggcat
agaaccttcacaggaccaagggcctctcctcccattgatgaccaactacg
ccatcctctgttacatatatatctagagccacagtctcaccatgtgtttt
ttgatggtggtatagttcaaaggagctctgagggtactggtagtaatatg
atgtctcttctatgagcatcggtcccttcagctcctaggtacttctcctg
gctactcatggagaactgtcgctgtgagatcacttctgtatt
ctagctccagctacatatgcagcagaggatggcttatctcacatctacag
gagggaaggcccttggtcctgtggaggcttgatgcagcagtgtagaagga
tgctggagaggtgagacaggagtgggtgggtgggtgggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_111336598_111337704
seq2: B6Ng01-142M08.b_48_1139

seq1  GAATTCTAGGAAAATGGTTTAACAACAAATGCTTACAATTTGAGCATTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGGAAAATGGTTTAACAACAAATGCTTACAATTTGAGCATTTT  50

seq1  TAATTAAAAAATTCAAAATAAGCAAAGTGTGGCACATGTATGGCACAGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAAAAAATTCAAAATAAGCAAAGTGTGGCACATGTATGGCACAGGT  100

seq1  AAAAAATTTCAGAAGATTGTGAAACTTTGTTTCATGTAAAAAATTATTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATTTCAGAAGATTGTGAAACTTTGTTTCATGTAAAAAATTATTTA  150

seq1  AAATATTGTACAAATTTGTATTCAGGATATAAAAATAAGGTGTTTGTGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTGTACAAATTTGTATTCAGGATATAAAAATAAGGTGTTTGTGAA  200

seq1  GGCTAAATAAATTTTATTCAAAAAGAAATGATAGTTAAAGGATACTTCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAAATAAATTTTATTCAAAAAGAAATGATAGTTAAAGGATACTTCAT  250

seq1  TATATATAAAGAAAACTTCTAAACTCCAATATATAAAAATATGGCTTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATAAAGAAAACTTCTAAACTCCAATATATAAAAATATGGCTTTCT  300

seq1  GTGCTAAAAGTCTTGAATAAGGATGTTCAAAATATGCATTCTTATCTAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTAAAAGTCTTGAATAAGGATGTTCAAAATATGCATTCTTATCTAAA  350

seq1  ATAACCCAAATGTCAGGAAAGTTCATACTATAGCTTAGAAAAATAATATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACCCAAATGTCAGGAAAGTTCATACTATAGCTTAGAAAAATAATATT  400

seq1  GGATTAAGTTATCTTTTTTTTTTTTTTTGAGAAAACTTCTCAGAAAAGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTAAGTTATCTTTTTTTTTTTTTTTGAGAAAACTTCTCAGAAAAGTC  450

seq1  ATCAGAGGGAAAAAAGTTTACTTTGATCAAAAGTTCTAGGGTATTCTAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAGGGAAAAAAGTTTACTTTGATCAAAAGTTCTAGGGTATTCTAGC  500

seq1  CAGAATAAAAAGGCATAGTGGCAGAATATTGAGGCAGGTAGTCACATTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATAAAAAGGCATAGTGGCAGAATATTGAGGCAGGTAGTCACATTTC  550

seq1  AACTGTGATCAGGAAACTAAAAGAATTGAACACTGGTACTCTGCTGGCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTGATCAGGAAACTAAAAGAATTGAACACTGGTACTCTGCTGGCTT  600

seq1  TTTCTCATGTTGCTTGAGATCTTAGTACATAGAGTCAGTACTATAGCAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCATGTTGCTTGAGATCTTAGTACATAGAGTCAGTACTATAGCAAT  650

seq1  GATGGAAATTATAACCTCAGGTAGCATTTTGAGAACATGCTTTTTAAAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGAAATTATAACCTCAGGTAGCATTTTGAGAACATGCTTTTTAAAAT  700

seq1  TATTATTACACATTTTCTTTATTTACATTTCAATTATTATCCCCTTTCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTACACATTTTCTTTATTTACATTTCAATTATTATCCCCTTTCCT  750

seq1  AGTTTCCCATCTGAAAATCCCCTATCTCCTCCCCCCTCTCCCTGCTCTCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCCCATCTGAAAATCCCCTATCTCCTCCCCCCTCTCCCTGCTCTCC  800

seq1  AACCTACCCACTCCCATTCCTGGTCCTGGAATTCCCCTATACTGGGGCAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTACCCACTCCCATTCCTGGTCCTGGAATTCCCCTATACTGGGGCAT  850

seq1  AGAACCTTCACAGGACCAAGGGCCTCTCCTCCCATTGATGACCAACTACG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACCTTCACAGGACCAAGGGCCTCTCCTCCCATTGATGACCAACTACG  900

seq1  CCATCCTCTGTTACATATATATCTAGAGCCACAAGTCTCACCATGTGTTT  950
      |||||||||||||||||||||||||||||||| |||||||||||||| ||
seq2  CCATCCTCTGTTACATATATATCTAGAGCCAC-AGTCTCACCATGTG-TT  948

seq1  TTTTGATTGGTGGTATAGTTCAAAGGAGCTCTGAGGGTACTGGTTAGTTA  1000
      |||||| |||||||||||||||||||||||||||||||||||| ||| ||
seq2  TTTTGA-TGGTGGTATAGTTCAAAGGAGCTCTGAGGGTACTGG-TAG-TA  995

seq1  ATATTGATGTCTCTTCTATGGAGCATCGGTCCCCTTCAGCTCCTTAGGTA  1050
      ||| ||||||||||||||| |||||||||| |||||||||||| ||||||
seq2  ATA-TGATGTCTCTTCTAT-GAGCATCGGT-CCCTTCAGCTCC-TAGGTA  1041

seq1  CTTTCTCTGGCTACTTCATTGAGAACCTTGTTCGCTGTGAGTATCCACTT  1100
      |||   |||||||| |||| ||||||  || |||||||||| || |||||
seq2  CTTCTCCTGGCTAC-TCATGGAGAAC--TG-TCGCTGTGAG-AT-CACTT  1085

seq1  CTGTATT  1107
      |||||||
seq2  CTGTATT  1092