MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-144F09
Chromosome	3 (Build37)
Map Location	77,614,572 - 77,615,771
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC100041625, LOC100041635, Dnmt3a-ps1
Downstream gene	EG626461, LOC667526, LOC626479, LOC100041691
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100041625 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041625
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	LOC100041635 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041635
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Dnmt3a-ps1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:445261 MGI:2674154
definition	note : DNA methyltransferase 3A, pseudogene 1 pseudo : _no_value

name	EG626461 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:626461 MGI:3648953
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 15 Proteins pseudo : _no_value

name	LOC667526 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667526
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 Proteins pseudo : _no_value

name	LOC626479 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:626479
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC100041691 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041691
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 4 Proteins pseudo : _no_value

name	LOC100041625 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149251210 GeneID:100041625
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : hypothetical protein LOC100041625 transcript_id : XM_001476712.1

name	LOC100041625 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149251211 GeneID:100041625
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001476762.1

name	LOC100041635 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041635
definition	number : 1 pseudo : _no_value

name	LOC100041635 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041635
definition	number : 2 pseudo : _no_value

name	EG626461 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:626461
definition	number : 1 pseudo : _no_value

name	LOC667526 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667526
definition	number : 1 pseudo : _no_value

name	LOC626479 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:626479
definition	number : 1 pseudo : _no_value

name	LOC626479 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:626479
definition	number : 2 pseudo : _no_value

name	Dnmt3a-ps1 (CDS detail)
type	misc_feature
link	vega ensembl
xref
definition	note : Dnmt3a-ps1 pseudogene pseudo : _no_value

name	LOC100041691 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149251212 GeneID:100041691
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 4 Proteins product : similar to zinc finger protein ZFP114 pseudo : _no_value transcript_id : XR_032938.1

clone name	MSMg01-345K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-068M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-454O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-181P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-125L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-263N08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-475C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-261J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410B07
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-206L05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-425H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279E08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-479K01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-448I04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-536N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477E08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-330M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387K18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-524M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-103D03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-319G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-263D12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-295A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-523N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-540O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-164I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-185P24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-153K02
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-144F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-471O18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-342J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-351F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-146J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-495I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-203L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-209O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-189N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-421L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136I22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-102O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-431K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-155H03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439P18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-195H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-078E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062M21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419E04
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-388D14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-450J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-237M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-289F08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-138M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-097C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-177L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-124H05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-320L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-142H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-142J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-403J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361J20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510D14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-236M18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349K15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122C21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-387H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-323G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-051B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-362K24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-451K19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-399N01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-440L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-425P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-159B01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-306E21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460N16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-333E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-454F05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-260O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-135B04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325E21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082K09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205H18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-275K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130G03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-083N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-116H03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183O03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108A04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174A13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-065B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010G22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-330L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-267H15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-267H16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-179G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335K24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097C07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346H19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-035D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-035F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246L05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098N23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059M18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169E17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142L18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-164M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-065L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-310E21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-073H05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-245I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022A02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016P05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108G15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235N10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092E06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122O17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156B14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-287B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206A05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060I19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061M08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-275H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164A11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246N09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-195E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110L24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335C02
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-144F09.b	B6Ng01-144F09.g
ACC	DH942041	DH942042
length	1,183	1,125
definition	DH942041\|Mus musculus domesticus DNA, BAC clone: B6Ng01-144F09, 5' end.	DH942042\|Mus musculus domesticus DNA, BAC clone: B6Ng01-144F09, 3' end.
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattcagtcgatctagattagaaaggagaaattaaaagcttagtattat taaatataattcaaatgtagaaaaacagaaaatttcatctattatggtgg ttactaccacacaaattttctcctaaattttcaacttacaataagataca tttgctttaccacatgtctttgagtggtcaggaagctaaagtcacagagc cagataacttactctcttcgaaaactataaaatctcaggtaccacaggac tagaaagcccttcctcaaactatcatgggttttgagagtctcctctctga taattgtctagaaaccttagctcctcaccattcatacctgtttatggatt actgcacaatgtggtagctgacacccaaaaggaaaagtcatgaagctgag caaaactgacattgttggtcttacctccaagttctagcacatcgtgtcta ctgtattcttttaattagaactcactcagcctactgttcactcaaatata gataggtaagtaataacattaatattacaaggaatattgtcttggaaata taggaaccttcttggatgacacaaatatttcctataactgtatacatcat atctgcaaagtcataaatgaatcaaatgagacaataaaatatatgatgat atactagtaataacaagtataacagcgacggctcacttattatttctact ccataacgtagcttgtaactagtgcaatcggaaaaacataaaataaacaa aacatggattgtatgggaaaaataacattgttattatatgcagatagtac aaacagattactagaaacactagaaaatgaagctttggcatagtgaagag aatattgtggctagtaggagtacctgacttcaaactacaacactacaaaa aataagctacatagcaatatttatttattagctttaatacataaatatta ttccaatagctcaagatataatctgttgctgaagtcagttaaagaattca aaaccatgaaagaatgcatacaatagttactattataaatatttcccatt acttacaaagtcagaaatcccacaactccagcatagctttattctttgaa atcatcatgtaagtattatttaacaatggaaattagaatgggttagaaag gagccatgagttggagatcgaactgctctatta	gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg tcaaatgctttttctgcatctaaggagatgatcatgtagtttttgtcttt gagtttgtttatataatggattacattgatggattttcgtatattaaacc atccctgcatccctggaataaaacctacttggtcaggatggatgattgct ttaatgtgttcttggattcggttagcgagaattttattgaggatttttgc atcgatattcataagagaaattggtctgaagttcgctatctttgttgggt ctttctgtggtttaggtatcaaagtaatagtggcttcataaaatgagtta ggtagagtaccttctacttctcttttgtgaaatagtttgtgcagaactgg aattagatcttctttgaaggtctgatagaactctgcactaaacccatctg gtcctgggctttttttggttgggagactattaataattgcttctatttct ttaggtgatatgggactgtttagatgatcaacttgatcctgattcaactt tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt tcttcaggatctgttgttatgtctcccttttcatttctgattttgttaat taggattttgtccctatgccctttagtgagtctagctaagtgtttatcta tcttgtttgattttctcaaagaactaactcctcgtttggttaattctttg aatagttcttcttgtttccacttggttgatttcacccctgagtttgatta tttcctgccgtctactcctcttgggtgaatttgcttcctttttttctagg gcttttaggtgtgttgccagctgctagtatgtgctgtctctgttcttctt gaagcactcagagctatgagtttcctcttagaaatgctttcattgtgtcc aaagtttggggacgtgtggctcacttcataaactctaaaatcttattctt tcttattccttctgacaaggttacttggaaagaggtaatcgttcccgaag tgtggcctctacacaattatgagca
quality values	Open. Hide. 61 43 35 38 61 43 23 47 61 61 61 61 47 61 61 47 61 47 49 61 49 61 61 61 61 33 43 38 23 36 27 27 30 35 59 55 59 59 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 59 61 61 59 61 61 61 59 61 61 59 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 55 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 50 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 61 61 61 61 61 53 53 53 57 57 53 57 57 57 57 53 57 57 47 53 53 53 53 57 47 47 47 47 57 57 57 57 57 57 57 47 53 38 57 57 52 53 53 45 57 57 57 53 53 57 57 53 57 53 57 53 47 57 57 57 57 53 52 53 53 57 38 57 57 53 53 57 53 57 57 57 53 24 47 53 53 52 57 38 53 53 57 47 52 57 57 47 47 57 50 52 57 53 57 53 52 41 47 47 47 52 50 57 57 52 47 53 53 50 41 57 43 31 52 53 43 45 53 50 53 53 53 53 53 53 52 50 37 53 53 40 57 53 41 45 52 50 52 53 40 45 57 37 39 39 18 57 40 53 53 38 48 52 47 36 50 42 42 32 57 57 50 38 40 52 53 53 47 21 52 27 50 47 35 37 52 37 53 39 32 57 37 48 37 37 40 42 53 37 53 35 33 39 36 52 34 40 40 57 57 57 26 39 24 37 40 57 57 29 25 33 57 39 40 21 57 57 43 30 34 44 37 47 37 33 30 46 28 29 33 37 57 47 43 57 57 57 53 36 40 30 33 28 40 40 44 40 40 29 37 40 40 33 27 32 41 29 27 36 30 30 29 31 36 27 43 32 46 31 40 20 30 29 20 36 29 31 35 32 29 30 47 29 30 14 34 30 32 32 51 51 51 29 28 48 35 32 24 37 41 51 31 29 34 32 33 33 32 28 28 29 28 38 23 36 17 29 29 22 28 26 30 21 11 41 37 31 36 28 28 29 32 29 12 29 16 34 28 29 24 28 38 28 20 14 20 28 22 51 29 29 28 25 29 23 21 29 20 28 29 23 30 23 46 46 46 46 29 21 21 27 26 28 29 28 31 18 29 19 22 29 27 18 19 23 25 46 39 26 26 43 39 15 17 28 30 21 33 15 51 20 21 5 9 16 25 12 26 16 41 20 23 21 19 27 29 16 26 16 27 23 8 17 21 28 24 26 25 23 38 22 33 8 14 22 17 29 20 24 21 38 29 9 34 31 29 34 20 28 20 28 33 23 34 25 31 17 51 14 22 29 23 19 16 16 23 32 38 32 13 13 12 22 28 28 51 21 7 7 20 13 26 19 13 31 19 28 14 19 21 27 25 29 14 15 26 9 10 32 21 10 11 7 39 15 6 6 13 30 11 6 25 26 16 20 19 18 20 22 30 19 10 6 22 24 16 14 16 33 11 29 34 27 10 20 30 11 5 9 3 6 6 6 4 6 7 9 20 16 6 7 8 15 29 29 13 5 15 5 18 9 37 26 11 27 33 26 9 15 15 21 22 10 4 3 21 17 20 8 23 6 7 4 5 22 27 12 20 7 11 5 6 6 6 7 18 16 5 4 4 7 7 6 9 6 20 5 9 9 6 6 3 5 27 17 8 7 11 5 7 21 10 10 17 10 6 6 7 13 5 4 3 13 7 13 8 15 15 8 4 8 8 10 16 6 4 8 8 4	Open. Hide. 61 61 49 49 61 34 34 27 28 19 23 35 39 41 59 61 59 43 59 59 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 55 59 61 61 59 44 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 59 55 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 52 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 55 52 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 61 55 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 43 61 61 61 61 61 47 61 47 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 53 53 47 61 53 61 61 50 61 61 61 61 61 61 53 61 61 61 61 61 61 53 61 52 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 42 41 61 53 45 61 61 61 61 61 61 47 53 38 47 57 53 57 53 53 45 53 57 57 57 46 53 53 45 45 57 42 27 43 57 57 53 53 53 53 30 53 57 57 53 43 53 53 53 43 50 53 57 57 57 53 47 36 30 53 50 53 57 57 47 27 47 53 57 45 52 45 38 50 50 53 53 33 57 57 57 47 24 53 24 57 50 16 53 41 27 53 50 53 52 42 57 41 28 52 38 57 57 53 57 23 47 29 57 57 53 50 53 53 30 37 52 52 28 45 47 52 14 57 39 45 47 32 41 57 41 50 50 36 57 38 23 57 57 28 41 30 39 57 32 47 38 40 45 31 57 41 43 31 14 53 30 38 39 38 31 18 52 37 24 43 37 39 37 33 50 50 52 34 42 38 50 38 57 57 39 38 16 24 36 42 40 33 37 36 42 35 37 36 44 42 36 26 9 4 34 17 53 36 40 42 42 39 25 52 41 51 16 40 10 57 10 11 28 27 57 57 24 41 37 40 27 53 37 17 31 9 10 6 5 8 13 37 37 53 22 33 35 33 45 24 30 30 8 47 32 26 27 14 19 26 44 31 29 33 25 21 30 20 15 39 40 21 24 26 15 15 36 24 45 26 20 29 15 22 21 22 38 29 29 21 25 33 19 47 39 29 22 31 48 29 38 10 19 27 18 13 46 32 28 27 15 29 29 18 29 10 10 21 27 29 26 43 21 10 31 22 15 28 28 46 11 12 16 8 15 26 36 26 21 29 27 32 28 39 24 25 22 10 19 26 26 39 46 39 46 41 46 23 23 14 36 31 41 31 28 35 46 30 28 20 32 11 12 29 15 29 10 11 24 7 5 13 9 28 28 29 28 12 14 21 9 25 15 36 10 23 23 23 34 12 12 10 29 19 32 25 22 11 7 26 19 8 8 36 10 14 32 15 8 8 22 13 10 7 6 5 16 13 12 16 11 12 5 38 26 15 32 33 15 11 17 8 6 10 23 35 26 13 32 22 23 37 9 9 22 16 15 23 7 14 7 35 15 7 22 14 12 20 8 17 8 30 28 9 7 8 7 27 10 6 17 15 6 19 6 5 4 19 15 3 5 11 3 12 17 8 6 5 6 3 17 29 6 9 7 5 7 9 7 5 7 6 30 4 4 12 10 4 3 3 7 25 8 5 18 3 8 10 10 6 7 5 27 9 6 4 9 5 12 10 11 12 26 9 6 5 8 4 4 4 3 10 6 5 4 3 7 26 11 4 3 5 5 5 12 6 4 7 4 6 10 7 12 4 18 6 5 4 4 8 3 2 4 9 3 1 1 1

Alignment Information

BAC End 1

BAC End 2

seq1: chr3_77614572_77615771
seq2: B6Ng01-144F09.b_48_1230 (reverse)

seq1  TAATATGAGCAGTTCGATCTCCCACTCATGGCTCCTTTCTTTAACACCAT  50
      ||||| |||||||||||||||| ||||||||||||||||  |||| |  |
seq2  TAATA-GAGCAGTTCGATCTCCAACTCATGGCTCCTTTC--TAACCCATT  47

seq1  CTATATTTCCATATGTTAAATAATAACTTTAACATGATGATTTTCAAAGG  100
      ||| |||||||| ||||||||||| ||||  ||||||||| ||||||| |
seq2  CTA-ATTTCCAT-TGTTAAATAAT-ACTT--ACATGATGA-TTTCAAA-G  90

seq1  AATAAAGCTATGCTGTGAGTTTGGTTGGGATTTTCTTGACTTTGTAAGTA  150
      ||||||||||||||| |||||    ||||||||   ||||||||||||||
seq2  AATAAAGCTATGCTG-GAGTT---GTGGGATTT--CTGACTTTGTAAGTA  134

seq1  ATGGGAAATATTTATAATAGTAACTATTGTATGCATTCTTTCATGGTTTT  200
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  ATGGGAAATATTTATAATAGTAACTATTGTATGCATTCTTTCATGG-TTT  183

seq1  TGAATTCTTTAACTGACTTCAGCAACAGATTATATCTTGAGCTATTGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTCTTTAACTGACTTCAGCAACAGATTATATCTTGAGCTATTGGAA  233

seq1  TAATATTTATGTATTAAAGCTAATAAATAAATATTGCTATGTAGCTTATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATTTATGTATTAAAGCTAATAAATAAATATTGCTATGTAGCTTATT  283

seq1  TTTTGTAGTGTTGTAGTTTGAAGTCAGGTACTCCTACTAGCCACAATATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTAGTGTTGTAGTTTGAAGTCAGGTACTCCTACTAGCCACAATATT  333

seq1  CTCTTCACTATGCCAAAGCTTCATTTTCTAGTGTTTCTAGTAATCTGTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCACTATGCCAAAGCTTCATTTTCTAGTGTTTCTAGTAATCTGTTT  383

seq1  GTACTATCTGCATATAATAACAATGTTATTTTTCCCATACAATCCATGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTATCTGCATATAATAACAATGTTATTTTTCCCATACAATCCATGTT  433

seq1  TTGTTTATTTTATGTTTTTCCGATTGCACTAGTTACAAGCTACGTTATGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTATTTTATGTTTTTCCGATTGCACTAGTTACAAGCTACGTTATGG  483

seq1  AGTAGAAATAATAAGTGAGCCGTCGCTGTTATACTTGTTATTACTAGTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGAAATAATAAGTGAGCCGTCGCTGTTATACTTGTTATTACTAGTAT  533

seq1  ATCATCATATATTTTATTGTCTCATTTGATTCATTTATGACTTTGCAGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCATATATTTTATTGTCTCATTTGATTCATTTATGACTTTGCAGAT  583

seq1  ATGATGTATACAGTTATAGGAAATATTTGTGTCATCCAAGAAGGTTCCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGTATACAGTTATAGGAAATATTTGTGTCATCCAAGAAGGTTCCTA  633

seq1  TATTTCCAAGACAATATTCCTTGTAATATTAATGTTATTACTTACCTATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCCAAGACAATATTCCTTGTAATATTAATGTTATTACTTACCTATC  683

seq1  TATATTTGAGTGAACAGTAGGCTGAGTGAGTTCTAATTAAAAGAATACAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTGAGTGAACAGTAGGCTGAGTGAGTTCTAATTAAAAGAATACAG  733

seq1  TAGACACGATGTGCTAGAACTTGGAGGTAAGACCAACAATGTCAGTTTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACACGATGTGCTAGAACTTGGAGGTAAGACCAACAATGTCAGTTTTG  783

seq1  CTCAGCTTCATGACTTTTCCTTTTGGGTGTCAGCTACCACATTGTGCAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCTTCATGACTTTTCCTTTTGGGTGTCAGCTACCACATTGTGCAGT  833

seq1  AATCCATAAACAGGTATGAATGGTGAGGAGCTAAGGTTTCTAGACAATTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCATAAACAGGTATGAATGGTGAGGAGCTAAGGTTTCTAGACAATTA  883

seq1  TCAGAGAGGAGACTCTCAAAACCCATGATAGTTTGAGGAAGGGCTTTCTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGAGGAGACTCTCAAAACCCATGATAGTTTGAGGAAGGGCTTTCTA  933

seq1  GTCCTGTGGTACCTGAGATTTTATAGTTTTCGAAGAGAGTAAGTTATCTG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTGTGGTACCTGAGATTTTATAGTTTTCGAAGAGAGTAAGTTATCTG  983

seq1  GCTCTGTGACTTTAGCTTCCTGACCACTCAAAGACATGTGGTAAAGCAAA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGTGACTTTAGCTTCCTGACCACTCAAAGACATGTGGTAAAGCAAA  1033

seq1  TGTATCTTATTGTAAGTTGAAAATTTAGGAGAAAATTTGTGTGGTAGTAA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATCTTATTGTAAGTTGAAAATTTAGGAGAAAATTTGTGTGGTAGTAA  1083

seq1  CCACCATAATAGATGAAATTTTCTGTTTTTCTACATTTGAATTATATTTA  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCATAATAGATGAAATTTTCTGTTTTTCTACATTTGAATTATATTTA  1133

seq1  ATAATACTAAGCTTTTAATTTCTCCTTTCTAATCTAGATCGACTGAATTC  1200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATACTAAGCTTTTAATTTCTCCTTTCTAATCTAGATCGACTGAATTC  1183

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information