BAC Information

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BAC

Clone NameB6Ng01-144M07
Chromosome3 (Build37)
Map Location 111,520,158 - 111,521,233
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043190, LOC668712
Downstream geneLOC625585, EG229746, LOC668717
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-144M07.bB6Ng01-144M07.g
ACCDH942355DH942356
length1,0701,195
definitionDH942355|Mus musculus domesticus DNA, BAC clone: B6Ng01-144M07, 5' end.DH942356|Mus musculus domesticus DNA, BAC clone: B6Ng01-144M07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttattagatattttttatttacatttcaaatactatcctgaaa
gttctctatacccttctcctgccctactcccctacccacccactcccatt
tcttgaccctggcattcccccatatggggcatataaagtttgtaagacct
aggggcctctcttcccagtgatgcccgactgggccatcttctgctacata
tgcagctagagacacgaactctgggggtactgttagtgtgaatttctgtg
aaccatgcagtgtagcttcaattgttattaacttcactatagactctaaa
gcatcattcatagtaattgtaaattttattttcgcctttatagatacact
agatcttctttttgtgtttgtgatttagttatggaattcaaatcaaagcc
tctaggtttgagttataaaataataaaggcaatgtaatgctgcatgaatc
agaatatttcatgaattaaccacatatcatacatatatgtatattaatta
cacacagagacacagacacacatgcatatatatacttgtagagataatgc
ttaagtttctaaatttaagcatgttcagcattggtatgattgaaaaagca
tgaacatccctcttcagaatttatctcttttctgtctatgtatgtatata
ctgtctctgtatacatatgtatgtatttatgtatatatatatatacacat
aatatacaatatatatatatatatatatatataatgttcatcatcttcat
ctatttgtctatctgtagatatgtgtttgtttctatctctgtgatactta
gaaatttccacattttaattaagagtttataattatcctggattctagaa
gcatctcagcattttcaggattttatccagagtcaggaacatgagttaaa
caattccagaaagagaccttggaagtgcatttttgttcattatgctactc
aaaatattaggctgacatctagctttaatgttagaaagagaaaattgaag
tttataagtagagaaagtaagatataagctttgttgatcaattacgaata
attttcttagatgaaagagt
gaattcaacctggtggatttttcagaaaattaataatagttcttgaagac
ctagctataccaatcctggacatttatcccaaaaattctctactgtacca
caaggacatatgctccactaaattcataacagccttatttttaatagcca
gaagctagaaacaacccatatgtccctcaactcaagaatgggtacagaaa
atatggttcatctacacaactgaatattattcagctatgaaaaagcaaag
gcatcatgaattttgcaggtaaatggatggaatgagaaaatatcatcctg
agtgtggcaatccagaccctaaaatatattcatgttttatactcatagat
aaatgggaattagccaagaagtacaaaatacccatgtatgatcactgagg
ctaaggtaaagagaattagattaattgtgctgaaaaaggaattctcaaaa
aagagactttgttaagtgcaaaagcaacaatttgaacaagtgtagcaaat
ttagaaaggaaaattacaaaatattaaatattaaaggaaagtagaatgga
gctgaatcctatattctaggagataacagattaaggaagtgggactttgg
gggaaagatcccacccagctaagtttaggtcaaggcattacacctttaat
cccaggagacagtcaagcagatccatgagttcaagtccagcctgagacag
agcaaccaagcttaggcaaatggaaattaggtaatagaatgaggttaggg
tgacatggtccagccccagcaagcagcagaacttggcagttttggctatg
tgattttggttttagagtcaagaatagaaggactactaggacaattgatg
atgatttgttgaagctaagaaatcacagtaattaagagagactggattta
ttattatatttatttattattgggctgaatctgggaagtgcttctgagag
cacaaagaactgtgtttcagagatagccagctgtaccatgatgcagtttg
acttgcaatatgtaagaaacaccctgttgtattgttgaagtgaggcttag
agaacagctaaagctgcacatgagatgtcagtccacatgtgaaggtgcac
ctagttcaatgtgataggacgaggctctcaagttagctgcatgatgagcc
tttagactctgcaagtctatgtgcacaagatctagctataatgag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_111520158_111521233
seq2: B6Ng01-144M07.b_46_1115 (reverse)

seq1  ACTCTTTCATCTAAGAAAATTATTCTGTAATTGATTCACAAAGCTTATTA  50
      ||||||||||||||||||||||||| |||||||||  |||||||||| ||
seq2  ACTCTTTCATCTAAGAAAATTATTC-GTAATTGATCAACAAAGCTTA-TA  48

seq1  TCTTTACTTTCTCTACTTATAAACTTCAATTTTCTTCTTTCCTAACATTA  100
      || ||||||||||||||||||||||||||||||| ||||| |||||||||
seq2  TC-TTACTTTCTCTACTTATAAACTTCAATTTTC-TCTTT-CTAACATTA  95

seq1  AAGCTAGATGTCAGCCTAATATTTTTGAGTAGCATAATGAACAAAAATGC  150
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AAGCTAGATGTCAGCCTAATA-TTTTGAGTAGCATAATGAACAAAAATGC  144

seq1  ACTTCCAAGGTCTCTTTCTGGAATTGTTTAACTCATGTTCCTGACTCTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCAAGGTCTCTTTCTGGAATTGTTTAACTCATGTTCCTGACTCTGG  194

seq1  ATAAAATCCTGAAAATGCTGAGATGCTTCTAGAATCCAGGATAATTATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATCCTGAAAATGCTGAGATGCTTCTAGAATCCAGGATAATTATAA  244

seq1  ACTCTTAATTAAAATGTGGAAATTTCTAAGTATCACAGAGATAGAAACAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTAATTAAAATGTGGAAATTTCTAAGTATCACAGAGATAGAAACAA  294

seq1  ACACATATCTACAGATAGACAAATAGATGAAGATGATGAACATTATATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATATCTACAGATAGACAAATAGATGAAGATGATGAACATTATATAT  344

seq1  ATATATATATATATATATTGTATATTATGTGTATATATATATATACATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATATATATTGTATATTATGTGTATATATATATATACATAA  394

seq1  ATACATACATATGTATACAGAGACAGTATATACATACATAGACAGAAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATACATATGTATACAGAGACAGTATATACATACATAGACAGAAAAG  444

seq1  AGATAAATTCTGAAGAGGGATGTTCATGCTTTTTCAATCATACCAATGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAAATTCTGAAGAGGGATGTTCATGCTTTTTCAATCATACCAATGCT  494

seq1  GAACATGCTTAAATTTAGAAACTTAAGCATTATCTCTACAAGTATATATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATGCTTAAATTTAGAAACTTAAGCATTATCTCTACAAGTATATATA  544

seq1  TGCATGTGTGTCTGTGTCTCTGTGTGTAATTAATATACATATATGTATGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGTGTGTCTGTGTCTCTGTGTGTAATTAATATACATATATGTATGA  594

seq1  TATGTGGTTAATTCATGAAATATTCTGATTCATGCAGCATTACATTGCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGGTTAATTCATGAAATATTCTGATTCATGCAGCATTACATTGCCT  644

seq1  TTATTATTTTATAACTCAAACCTAGAGGCTTTGATTTGAATTCCATAACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTATTTTATAACTCAAACCTAGAGGCTTTGATTTGAATTCCATAACT  694

seq1  AAATCACAAACACAAAAAGAAGATCTAGTGTATCTATAAAGGCGAAAATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCACAAACACAAAAAGAAGATCTAGTGTATCTATAAAGGCGAAAATA  744

seq1  AAATTTACAATTACTATGAATGATGCTTTAGAGTCTATAGTGAAGTTAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTACAATTACTATGAATGATGCTTTAGAGTCTATAGTGAAGTTAAT  794

seq1  AACAATTGAAGCTACACTGCATGGTTCACAGAAATTCACACTAACAGTAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATTGAAGCTACACTGCATGGTTCACAGAAATTCACACTAACAGTAC  844

seq1  CCCCAGAGTTCGTGTCTCTAGCTGCATATGTAGCAGAAGATGGCCCAGTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGAGTTCGTGTCTCTAGCTGCATATGTAGCAGAAGATGGCCCAGTC  894

seq1  GGGCATCACTGGGAAGAGAGGCCCCTAGGTCTTACAAACTTTATATGCCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCATCACTGGGAAGAGAGGCCCCTAGGTCTTACAAACTTTATATGCCC  944

seq1  CATATGGGGGAATGCCAGGGTCAAGAAATGGGAGTGGGTGGGTAGGGGAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGGGGGAATGCCAGGGTCAAGAAATGGGAGTGGGTGGGTAGGGGAG  994

seq1  TAGGGCAGGAGAAGGGTATAGAGAACTTTCAGGATAGTATTTGAAATGTA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGCAGGAGAAGGGTATAGAGAACTTTCAGGATAGTATTTGAAATGTA  1044

seq1  AATAAAAAATATCTAATAAAGAATTC  1076
      ||||||||||||||||||||||||||
seq2  AATAAAAAATATCTAATAAAGAATTC  1070