BAC Information

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BAC

Clone NameB6Ng01-145N08
Chromosome3 (Build37)
Map Location 4,841,176 - 4,842,153
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039167, LOC667709
Downstream geneLOC620283, Zfhx4, Pxmp3, EG620382, EG667759
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-145N08.bB6Ng01-145N08.g
ACCDH943130DH943131
length9861,052
definitionDH943130|Mus musculus domesticus DNA, BAC clone: B6Ng01-145N08, 5' end.DH943131|Mus musculus domesticus DNA, BAC clone: B6Ng01-145N08, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgcttacattttttctcattttactttgtatgtgtgtgcatg
tatgtttgtgtgtgcatgtttgcatggggtggggtagatgtaggtgtgat
atctgtgcatcttcccatgcatatgaatgtggtgaagaacaaagattgac
atcagtgtctcttctatactttccaccatatgtttttaagtcaggctttt
cactgaatctgaagcttagcatttgagatataccagctagttgggcctgc
ctggcttcccatccaagcccatcaggtgcttaaacttacacagcaatgat
tttattacccatctcctaccactagtatttcaatttcgtcaacttaccaa
agcaaattgaacattgagagaagaaacatcacatcatcaccaagccaacg
ctaccataagcagtggaggtaatgaatgcccagagagttggattgacata
aagcttggtgtgtcataaccatttaccacacaaataatattttgcttatc
cttctgatatttaattagtttactctcagaatgtaaaataaaaataataa
agtcatggtgctatttatgattgtgtttctgcttttataagggagaagac
ataaatgcagcttacaaaagattcttggctgttttaagtatgtctttctg
tatagattttttgtttgtattagtttttaccaaattattatgattattat
attttaaattcatttattttttagttacatttactgcaaatttttttgta
taacacttttcattttaaatgtatcatttattattgtaatcttagtatgg
tgaatccctttttattatcaattcaacaaactctaaaatcacttgcgaga
tgtgtctgaaagccttttataaggcattattttaattattaattgaagta
gggataatctatgccatgtatatagaaaacatttcctgacgaaagtattg
ggtaataatagagccattgacattcatgtggttcac
gaattctttgtatatattggatattagccctctatcacatgtgagattgg
taaagatctttccccagtctgttggctgccattttgtcctattgacagtg
tcctttgccttacaggagctttgcaatttcatgaggtcccaattgctgat
tcttttagttaattaattaattttttaattacacattttctttatttaca
tttcaaaggttatccccttatctgtttcttgatcttagagcataagccat
tgattcaggaacttttcccctgtgctcatgtgtttgaaactgttccccag
tctctcttccattacattcagtgtatctggttttatgtagcagtcctcgg
tccactttgacttcaactttgtacagggagataagaatgagttaatttgc
aatcttctacatgttggccaccagttgaacccagcatcatttgatgaaaa
aagctgtctttttcccactggattgttttcgttcctttgccaaatatcaa
gtgacaataggtgtgtgggttcacttctgggtcttcaattctattccatt
aatctttctgccagtcactgtaccagtaccatgcagattttatcacaatt
gctctgtaatacagcttgaggacagggatggtgattccctcagaagttct
tttattgttgagaatagttttctctatcctgggttttttgttattccaaa
tgaatttaagaattgtgctttctaacgctatgaagaattgagttggaatt
ttgatggggattgcattgaatctgtagattggttttggcaaaatgtccat
ttttactatattaatattgccaatccatgagcatgagagacctttcattc
ttcttagaatggaagtgggggaacacactcattgaagcaggtaatgggaa
taggatagggtgtttcaaaggggagactgaaagggaaaacattggaaaaa
aaaaaagaagagcatccaactagagccagtgggagagggatattaaagga
gataattattttctggctattactcaggtatatataatatatatttacta
tg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_4841176_4842153
seq2: B6Ng01-145N08.b_45_1030

seq1  GAATTCTTTGCTTACATTTTTTCTCATTTTACTTTGTATGTGTGTGCATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGCTTACATTTTTTCTCATTTTACTTTGTATGTGTGTGCATG  50

seq1  TATGTTTGTGTGTGCATGTTTGCATGGGGTGGGGTAGATGTAGGTGTGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTTGTGTGTGCATGTTTGCATGGGGTGGGGTAGATGTAGGTGTGAT  100

seq1  ATCTGTGCATCTTCCCATGCATATGAATGTGGTGAAGAACAAAGATTGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTGCATCTTCCCATGCATATGAATGTGGTGAAGAACAAAGATTGAC  150

seq1  ATCAGTGTCTCTTCTATACTTTCCACCATATGTTTTTAAGTCAGGCTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGTGTCTCTTCTATACTTTCCACCATATGTTTTTAAGTCAGGCTTTT  200

seq1  CACTGAATCTGAAGCTTAGCATTTGAGATATACCAGCTAGTTGGGCCTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAATCTGAAGCTTAGCATTTGAGATATACCAGCTAGTTGGGCCTGC  250

seq1  CTGGCTTCCCATCCAAGCCCATCAGGTGCTTAAACTTACACAGCAATGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTTCCCATCCAAGCCCATCAGGTGCTTAAACTTACACAGCAATGAT  300

seq1  TTTATTACCCATCTCCTACCACTAGTATTTCAATTTCGTCAACTTACCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTACCCATCTCCTACCACTAGTATTTCAATTTCGTCAACTTACCAA  350

seq1  AGCAAATTGAACATTGAGAGAAGAAACATCACATCATCACCAAGCCAACG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAATTGAACATTGAGAGAAGAAACATCACATCATCACCAAGCCAACG  400

seq1  CTACCATAAGCAGTGGAGGTAATGAATGCCCAGAGAGTTGGATTGACATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCATAAGCAGTGGAGGTAATGAATGCCCAGAGAGTTGGATTGACATA  450

seq1  AAGCTTGGTGTGTCATAACCATTTACCACACAAATAATATTTTGCTTATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTGGTGTGTCATAACCATTTACCACACAAATAATATTTTGCTTATC  500

seq1  CTTCTGATATTTAATTAGTTTACTCTCAGAATGTAAAATAAAAATAATAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGATATTTAATTAGTTTACTCTCAGAATGTAAAATAAAAATAATAA  550

seq1  AGTCATGGTGCTATTTATGATTGTGTTTCTGCTTTTATAAGGGAGAAGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATGGTGCTATTTATGATTGTGTTTCTGCTTTTATAAGGGAGAAGAC  600

seq1  AT-AATGCAGCTTACAAAAGATTCTTGGCTGTTTTAAGTATGTCTTTCTG  649
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATGCAGCTTACAAAAGATTCTTGGCTGTTTTAAGTATGTCTTTCTG  650

seq1  TATAGATTTTTTGTTTGTATTAGTTTTTACCAAATTATTATGATTATTAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGATTTTTTGTTTGTATTAGTTTTTACCAAATTATTATGATTATTAT  700

seq1  ATTTTAAATTCATTTA-TTTTTAGTTACA-TTACTGCAAA-TTTTTTGTA  746
      |||||||||||||||| |||||||||||| |||||||||| |||||||||
seq2  ATTTTAAATTCATTTATTTTTTAGTTACATTTACTGCAAATTTTTTTGTA  750

seq1  TAACAC-TTTCATTTTAAATGTATCATTTATTATTGTAATCTTAGTATGG  795
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TAACACTTTTCATTTTAAATGTATCATTTATTATTGTAATCTTAGTATGG  800

seq1  TGAATCCCTTTTTATTATCAATTCAACAAACTCTAAAATCACTTGCGAGA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCCCTTTTTATTATCAATTCAACAAACTCTAAAATCACTTGCGAGA  850

seq1  TGTGTCTGATAG-CTTTTATAAGGCATTATTTTAATTATTAATTGAAGTA  894
      ||||||||| || |||||||||||||||||||||||||||||||||||||
seq2  TGTGTCTGAAAGCCTTTTATAAGGCATTATTTTAATTATTAATTGAAGTA  900

seq1  -GGAAGATCTATGCAATGTATATAG-AAACATTTCCTGACGAAAGTATTG  942
       |||  |||||||| |||||||||| ||||||||||||||||||||||||
seq2  GGGATAATCTATGCCATGTATATAGAAAACATTTCCTGACGAAAGTATTG  950

seq1  GGCTATAAATAGAGCAATAGACATTCATGT-GTTCAC  978
      || ||  |||||||| || ||||||||||| ||||||
seq2  GG-TAATAATAGAGCCATTGACATTCATGTGGTTCAC  986