MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-146B24
Chromosome	3 (Build37)
Map Location	80,804,748 - 80,805,306
singlet/doublet	singlet
Overlap gene	EG626841
Upstream gene	EG626797, Gria2, Glrb
Downstream gene	Pdgfc, LOC229443, LOC100041901, Ctso, Tdo2, Accn5
Link	Open Mouse BAC browser

Click to get alignment info.

name	EG626797 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:626797 MGI:3644992
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins

name	Gria2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14800 MGI:95809
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	Glrb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14658 MGI:95751
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG626841 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:626841 MGI:3648932
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 79 ESTs, 1 Protein

name	Pdgfc (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:54635 MGI:1859631
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC229443 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:229443
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC100041901 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041901
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Ctso (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:229445 MGI:2139628
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tdo2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56720 MGI:1928486
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Accn5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:58170 MGI:1929259
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG626797 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149251228 GeneID:626797 MGI:3644992
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins product : predicted gene, EG626797 transcript_id : XM_899578.3

name	Gria2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:139394521 GeneID:14800 MGI:95809
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glutamate receptor, ionotropic, AMPA2 (alpha 2) transcript_id : NM_001083806.1

name	Gria2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85861223 GeneID:14800 MGI:95809
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glutamate receptor, ionotropic, AMPA2 (alpha 2) transcript_id : NM_013540.2

name	Gria2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85861219 GeneID:14800 MGI:95809
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glutamate receptor, ionotropic, AMPA2 (alpha 2) transcript_id : NM_001039195.1

name	Glrb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142367600 GeneID:14658 MGI:95751
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glycine receptor, beta subunit transcript_id : NM_010298.4

name	EG626841 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149251230 GeneID:626841 MGI:3648932
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 79 ESTs, 1 Protein product : predicted gene, EG626841 transcript_id : XM_891450.3

name	Pdgfc (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31560372 GeneID:54635 MGI:1859631
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : platelet-derived growth factor, C polypeptide transcript_id : NM_019971.2

name	LOC100041901 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149251232 GeneID:100041901
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100041901 transcript_id : XM_001477184.1

name	Ctso (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130454 GeneID:229445 MGI:2139628
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cathepsin O transcript_id : NM_177662.2

name	Tdo2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982696 GeneID:56720 MGI:1928486
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tryptophan 2,3-dioxygenase transcript_id : NM_019911.2

name	Accn5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130479 GeneID:58170 MGI:1929259
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : amiloride-sensitive cation channel 5, intestinal transcript_id : NM_021370.2

name	EG626797 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149251229 GeneID:626797 MGI:3644992
definition	codon_start : 1 product : hypothetical protein protein_id : XP_904671.3

name	Gria2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:139394522 GeneID:14800 MGI:95809
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005624 - membrane fraction [Evidence IDA]; GO:0045211 - postsynaptic membrane [Evidence IEA] GO_function : GO:0005234 - glutamate-gated ion channel activity [Evidence IDA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0004970 - ionotropic glutamate receptor activity [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0007268 - synaptic transmission [Evidence IDA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation note : isoform 3 is encoded by transcript variant 3; AMPA selective glutamate receptor; glutamate receptor B; glutamate receptor 2 product : glutamate receptor, ionotropic, AMPA 2 isoform 3 protein_id : NP_001077275.1

name	Gria2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85861224 CCDS:CCDS17423.1 GeneID:14800 MGI:95809
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005624 - membrane fraction [Evidence IDA]; GO:0045211 - postsynaptic membrane [Evidence IEA] GO_function : GO:0005234 - glutamate-gated ion channel activity [Evidence IDA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0004970 - ionotropic glutamate receptor activity [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0007268 - synaptic transmission [Evidence IDA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation note : isoform 2 is encoded by transcript variant 2; AMPA selective glutamate receptor; glutamate receptor B; glutamate receptor 2 product : glutamate receptor, ionotropic, AMPA 2 isoform 2 protein_id : NP_038568.2

name	Gria2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85861220 GeneID:14800 MGI:95809
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005624 - membrane fraction [Evidence IDA]; GO:0045211 - postsynaptic membrane [Evidence IEA] GO_function : GO:0005234 - glutamate-gated ion channel activity [Evidence IDA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0004970 - ionotropic glutamate receptor activity [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0007268 - synaptic transmission [Evidence IDA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation note : isoform 1 is encoded by transcript variant 1; AMPA selective glutamate receptor; glutamate receptor B; glutamate receptor 2 product : glutamate receptor, ionotropic, AMPA 2 isoform 1 protein_id : NP_001034284.1

name	Glrb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981754 CCDS:CCDS17424.1 GeneID:14658 MGI:95751
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0045211 - postsynaptic membrane [Evidence IEA] GO_function : GO:0005254 - chloride channel activity [Evidence IEA]; GO:0031404 - chloride ion binding [Evidence IEA]; GO:0004519 - endonuclease activity [Evidence IEA]; GO:0005230 - extracellular ligand-gated ion channel activity [Evidence IEA]; GO:0016934 - glycine-gated chloride channel activity [Evidence IEA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0030594 - neurotransmitter receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0003964 - RNA-directed DNA polymerase activity [Evidence IEA] GO_process : GO:0006821 - chloride transport [Evidence IEA]; GO:0006811 - ion transport [Evidence IEA]; GO:0006278 - RNA-dependent DNA replication [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : inhibitory glycine receptor; glycine receptor beta subunit product : glycine receptor, beta subunit protein_id : NP_034428.2

name	EG626841 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149251231 GeneID:626841 MGI:3648932
definition	codon_start : 1 product : similar to adenosine triphosphatase protein_id : XP_896543.2

name	Pdgfc (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:10242385 CCDS:CCDS17425.1 GeneID:54635 MGI:1859631
definition	GO_component : GO:0005576 - extracellular region [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008083 - growth factor activity [Evidence IEA]; GO:0005161 - platelet-derived growth factor receptor binding [Evidence IDA] GO_process : GO:0008283 - cell proliferation [Evidence IEA]; GO:0009887 - organ morphogenesis [Evidence IMP] [Evidence IGI]; GO:0048008 - platelet-derived growth factor receptor signaling pathway [Evidence IDA]; GO:0008284 - positive regulation of cell proliferation [Evidence IDA]; GO:0050730 - regulation of peptidyl-tyrosine phosphorylation [Evidence IDA]; GO:0000074 - regulation of progression through cell cycle [Evidence IEA]; GO:0007171 - transmembrane receptor protein tyrosine kinase activation (dimerization) [Evidence IDA] codon_start : 1 note : fallotein; platelet-derived growth factor c; platelet-derived growth factor, C polypeptide product : platelet-derived growth factor, C polypeptide protein_id : NP_064355.1

name	LOC100041901 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149251233 GeneID:100041901
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477234.1

name	Ctso (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29244082 CCDS:CCDS17426.1 GeneID:229445 MGI:2139628
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA] codon_start : 1 product : cathepsin O protein_id : NP_808330.1

name	Tdo2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982697 CCDS:CCDS17427.1 GeneID:56720 MGI:1928486
definition	GO_function : GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016702 - oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen [Evidence IEA]; GO:0004833 - tryptophan 2,3-dioxygenase activity [Evidence IEA] GO_process : GO:0006568 - tryptophan metabolism [Evidence IEA] codon_start : 1 note : tryptophan-2,3-dioxygenase product : tryptophan 2,3-dioxygenase protein_id : NP_064295.2

name	Accn5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:10946702 CCDS:CCDS17428.1 GeneID:58170 MGI:1929259
definition	GO_function : GO:0015280 - amiloride-sensitive sodium channel activity [Evidence ISS]; GO:0005216 - ion channel activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : amiloride-sensitive Na+ channel; amiloride-sensitive sodium channel; brain-liver-intestine amiloride-sensitive sodium channel product : amiloride-sensitive cation channel 5, intestinal protein_id : NP_067345.1

name	LOC229443 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:229443
definition	number : 1 pseudo : _no_value

clone name	MSMg01-527P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-081F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-296L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-110O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-160C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520G06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-346H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-364F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-466B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-297B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-095J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-115E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-366A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-166K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-489H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-496E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-399G11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-193C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-367G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-106O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-420I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-511K02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-093C12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-464J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-169P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-402H05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-168D14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-185P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-403B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-202B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-451K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-439F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-145A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-291A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-103N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-094G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-214E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-399B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-308K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-169A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477A03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-104E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062I18
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-174I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-395A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-468J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-164M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-348B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-181F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-094K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-436G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-105H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-327F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-371C24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-512H01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-426A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-370H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-487I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-047D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-178M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-525I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-494C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-145G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-402K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-186L06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-131L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-362J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-137I04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-477J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-528B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-099L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-272D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357B01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-389E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500F18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-458L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-264L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522C10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-442P01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-178H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-491G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-364C02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-168O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241P20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311P11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-133E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107E15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027E12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154F02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-139D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189L18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-153B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306L08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-347B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146B24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049H09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-225K24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193C22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138E05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-051E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-244F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275P05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-012J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344H20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-051M17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-117A11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-165N19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-105A07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-296N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295D13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-124P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026D12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042H20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-203N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068P09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127P11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322D03
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-146B24.b	B6Ng01-146B24.g
ACC	DH943350	DH943351
length	944	553
definition	DH943350\|Mus musculus domesticus DNA, BAC clone: B6Ng01-146B24, 5' end.	DH943351\|Mus musculus domesticus DNA, BAC clone: B6Ng01-146B24, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctgagagatgagcaatgctagagatgtcccatttaggtctgagta ctgtgcaatttctcattctctatacctttgccagttgtgagtctctgtca gtccttcacatagtgcagaaagaagtttctctgatgaaggttgaaagatg atccctctatgagcaaaacagcagttttgttttaattggttttatattat gcccatttagtaggataaaaaggagtgggttttcctaaaggttctatgac ttctctagtcatgggttcatgacaataataatagtgcaaaatacaagttt caacttgtggagctggtgttgttcaatcagaaagtggttggttattctga ttatgtttgtgtcatcagtgcacctgtaggcacgtcttggcagatcagtt gttattgtagctcttgacattcaggctagttaagatggatgatttctttc tctcttcctgtagcaagtaaaatatttccagcactctgaaagctagccat tagcaatgaggcttccaggaatccagcttgatttctctgtgttatgtgac tcaaatatgtggtttcttcaatagtattttactattatgttctggaggat aaccaaggtcacaggcctatgacatctggaggattaatggaaattcatta ttcaacaactacaaagaagggttacccattcttggcactgagattttatt tattagactattatgcatatatatgtgtgtgtgtatacatatatatatat atatatatatatatatatatatatatatatgtgtacacacacacatatat atgtatatttgtgtataaaaaaaatctcagtgcgcagaagtgtggggacc ttctttgtagtagttagaataaataaattctataattccgcgagatggtc gtgggcgtgtgacctggggtatatccagacaaagtagtaaatac	cgctgtcaacagcattgttatttttgttaggagagggtggaggtctggag ttgcgttttgtaggggcgtcgtcttcagcatcagtgtcatcaataagggg gatgtgcggctctgaatcttctatcctaaactcagggcgtgtcataaagt tgtggattgaacttcttgattctggcttctctaacccttcgtataaagaa ctacgaaatgcattcacccctcggatctgtgtttggactctgttcaggcc tctaaaccacaagatctggccacgccacaactccctttcggcatggtcaa tctcttcaacatcctctgctaattcctcctcaggtatctcctccttctgt gttccatgaccagcttcttttagaaactgtaagcgtaattccaaagtgat tctaatgactttctgctagcctcacattagtgccttgctcactggagaag ctgccttctgtggcagatggaaagatatacaaagacctacagccagacaa tacgcagagagtgaaagaccctgaaacactcagtcctaagtggggggggg ggg
quality values	Open. Hide. 47 41 28 27 57 53 39 41 61 61 61 61 30 12 43 61 61 53 61 61 47 61 61 61 47 19 31 14 11 8 11 22 12 14 19 15 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 49 50 28 30 30 43 52 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 55 61 61 61 59 61 61 61 61 61 61 61 59 55 61 61 61 61 61 59 61 61 59 59 61 61 61 61 59 59 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 59 55 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 55 61 55 61 61 55 61 61 55 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 61 61 61 61 61 61 61 61 61 61 55 55 61 61 61 61 61 55 61 61 61 55 61 61 61 55 50 61 61 61 61 47 43 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 47 61 61 50 61 61 55 61 47 61 61 61 61 61 61 55 61 61 61 61 49 61 55 55 61 50 61 40 61 61 50 61 52 61 61 61 61 61 47 61 61 61 61 53 61 50 61 14 61 47 27 61 47 30 47 31 61 43 61 50 50 53 53 52 53 61 50 61 53 50 53 61 47 50 42 53 61 52 61 61 43 27 61 43 18 50 50 50 53 61 53 61 61 50 39 61 50 42 50 40 52 61 61 61 47 35 47 61 61 61 52 45 61 61 61 61 38 42 61 8 61 26 13 53 39 47 38 37 42 43 52 50 39 53 53 52 45 35 52 50 43 61 40 52 36 61 61 53 45 45 57 52 42 47 28 47 43 53 52 45 53 35 35 53 50 52 52 45 50 52 53 50 52 57 53 57 45 57 50 57 50 57 45 57 40 40 57 28 57 11 53 45 53 53 57 53 47 47 53 47 47 43 47 47 52 45 50 43 47 36 50 50 37 33 53 45 47 38 32 31 27 47 37 37 50 42 43 47 34 25 30 24 13 14 22 24 13 17 17 13 15 18 30 23 20 8 8 12 18 25 31 18 17 13 17 8 14 9 8 8 8 12 9 8 14 10 8 13 21 11 7 15 10 17 7 19 19 24 17 8 23 24 50 5 9 8 10 22 8 8 11 9 38 7 20 27 8 10 7 14 17 7 8 18 23 11 8 23 23 16 14 13 13 15 6 9 14 14 14 12 9 10 6 10 10 7 9 14 20 18 8 8 12 13 10 8 8 12 12 9 5 8 8 20 34 34 14 38 10 22 14 14 18 5 17 16 10 19 8 24 10 23 20 18 8 8 6 23 8 10 13 11 8 10 16 11 12 22 15 23 10 16 5 7 6 14 8 10 24 7 14 6 7 5 4	Open. Hide. 52 24 40 52 52 36 30 28 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 55 44 55 59 61 59 61 61 61 61 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 53 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 53 61 53 61 46 50 50 37 47 61 50 61 53 61 61 61 53 61 61 61 61 61 53 46 61 61 61 61 53 61 61 61 61 61 61 61 61 61 53 53 57 57 57 53 57 57 57 57 57 53 53 53 57 57 57 57 57 57 57 53 53 51 57 57 47 46 43 57 57 53 57 57 57 57 57 57 57 57 57 57 57 53 53 46 57 53 46 46 57 57 57 57 57 53 47 37 50 52 52 53 44 47 57 53 57 53 47 53 53 57 53 45 50 41 43 43 47 47 38 47 38 31 33 30 34 37 42 57 37 57 53 53 57 57 57 41 53 52 24 46 38 46 52 57 57 46 47 50 53 53 52 47 39 52 53 53 52 53 46 47 52 52 57 57 41 42 57 57 57 57 41 21 12

Alignment Information

BAC End 1

BAC End 2

seq1: chr3_80804748_80805306
seq2: B6Ng01-146B24.g_66_624 (reverse)

seq1  CCCCCCCCCCCCACTTAGGACTGAGTGTTTCAGGGTCTTTCACTCTCTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCCCCCCACTTAGGACTGAGTGTTTCAGGGTCTTTCACTCTCTGC  50

seq1  GTATTGTCTGGCTGTAGGTCTTTGTATATCTTTCCATCTGCCACAGAAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTGTCTGGCTGTAGGTCTTTGTATATCTTTCCATCTGCCACAGAAGG  100

seq1  CAGCTTCTCCAGTGAGCAAGGCACTAATGTGAGGCTAGCAGAAAGTCATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTCTCCAGTGAGCAAGGCACTAATGTGAGGCTAGCAGAAAGTCATT  150

seq1  AGAATCACTTTGGAATTACGCTTACAGTTTCTAAAAGAAGCTGGTCATGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCACTTTGGAATTACGCTTACAGTTTCTAAAAGAAGCTGGTCATGG  200

seq1  AACACAGAAGGAGGAGATACCTGAGGAGGAATTAGCAGAGGATGTTGAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAGAAGGAGGAGATACCTGAGGAGGAATTAGCAGAGGATGTTGAAG  250

seq1  AGATTGACCATGCCGAAAGGGAGTTGTGGCGTGGCCAGATCTTGTGGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTGACCATGCCGAAAGGGAGTTGTGGCGTGGCCAGATCTTGTGGTTT  300

seq1  AGAGGCCTGAACAGAGTCCAAACACAGATCCGAGGGGTGAATGCATTTCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCCTGAACAGAGTCCAAACACAGATCCGAGGGGTGAATGCATTTCG  350

seq1  TAGTTCTTTATACGAAGGGTTAGAGAAGCCAGAATCAAGAAGTTCAATCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCTTTATACGAAGGGTTAGAGAAGCCAGAATCAAGAAGTTCAATCC  400

seq1  ACAACTTTATGACACGCCCTGAGTTTAGGATAGAAGATTCAGAGCCGCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTTTATGACACGCCCTGAGTTTAGGATAGAAGATTCAGAGCCGCAC  450

seq1  ATCCCCCTTATTGATGACACTGATGCTGAAGACGACGCCCCTACAAAACG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCCCTTATTGATGACACTGATGCTGAAGACGACGCCCCTACAAAACG  500

seq1  CAACTCCAGACCTCCACCCTCTCCTAACAAAAATAACAATGCTGTTGACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCCAGACCTCCACCCTCTCCTAACAAAAATAACAATGCTGTTGACA  550

seq1  GCGGAATTC  559
      |||||||||
seq2  GCGGAATTC  559

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information