BAC Information

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BAC

Clone NameB6Ng01-146D01
Chromosome3 (Build37)
Map Location 134,030,231 - 134,030,963
singlet/doubletsinglet
Overlap genenone
Upstream genePpa2, E130014J05Rik, EG620205, LOC100039168, LOC668862, LOC100039199, Cxxc4, Ppia-ps3_1390.1
Downstream geneLOC100039234, Tacr3, LOC229837, LOC100039290, EG620439, Cenpe, Bdh2, C80638, 4933425K02Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-146D01.bB6Ng01-146D01.g
ACCDH943400DH943401
length7401,189
definitionDH943400|Mus musculus domesticus DNA, BAC clone: B6Ng01-146D01, 5' end.DH943401|Mus musculus domesticus DNA, BAC clone: B6Ng01-146D01, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttccacgaaagtaacaaaatcttctatctttaggactctgaaaa
ttaatggaaggctttcagctgcctggtgccaagctccataactccttgat
accactgaaaaaaaatatctgagacctggagtccagcctgaagcccacta
ccaacagtcaagttgtgctagtattccttcaaaagctaaagctttcttct
caatgatgtcctagttactgctctaacagaaaacagtaagaccccagtta
cacaactttgtatttgacctaagttgccatatttaagatgaaaaattcct
gccccatttattcaaaataagtacatttttcaaacacatgttttaacttg
ccaggtacttgagtaagtgggtagaagttggggcaaacctgattgtggga
ccctttcttcctactggattgcctagtccagccctgtttgtgccttgcct
tattgttacgtcacatttgatctgtatctctggaaggcctgttctttaca
taagggaaagggaaaagcagtggatggggtgggggacatagggcagaact
gggggagtgaaggacctgtatcctggcatgcaatctaggtgggagcagaa
aagcctaattaactaagaaccactgagcagaaatggcagaatgacttggc
tgatagaatcaattcctctttctcttccctccctccctccctccctccct
ccctccctctctccctccctctttctcgcactcctccctt
gaattctttatagtgctggaggaaaatgaatggcttatcaaggtgtcaat
gccattaaatataagtcatgagaataagggaatgaaccaagacttgtctt
aggaacaattttagacataaaagcagagaattgactctatatttaaaaca
aaggtaagcacattcatctagaacccagataaaagtttctcaacaactca
gtaaaatcatacaagtgggtttcagttttctcctggtacatattgaaagt
caaaaaaataataaatggatggatagataggtaaaaaatagaaccaacct
accaattaaaccaaaatgattaaataaactactttatataggagcagtct
tagaaaataagactactgccaaggctcctgttctaaagaaggaggaactc
agaaaataagagagaacttaaagataccacatagccttacaggacctctt
ccattgctaggggtacagaaacacaaaattggctctatatcaaaagagga
ctgttcagggatatggctacttaacatgacatattaagcccttttttttt
tttttggaaaaagtcatttttatttcctcagataaagggatgaaataaga
gctatcccagagatgtatgaatacatggattcggctcagcccagagcatt
ccctattctcttctaaatatctgtaggtttagacctggaagcttctaacg
tctgtacactcttccagcctccatttgctaacctcagcctagaatgtttc
agcctctgagacttattctcgaacaagctcaccctttctagttcttttct
gaacggttgctgggctgctttaactcagctgttctagctcaaactcctct
tcaggctcgttgattcaatgtgactttttctcagcttctcaccgaatcgg
tctgcttgggcctcaaactaactctagaaatttgttctaatcttctgctc
cttcttattctctgcttcactgcctcgctgatctgcactgactgcgtact
catgatgactcatgcctgctgatctctcttcctgggctgctctaatagct
ttccttcttgctggtctgtggggagtgggccatctatctctgactcattc
tgttctttccgaattccttaagctcttctttctaagctagttactaaggt
gttatcaggaagctctggattctaggtggacactcaccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_134030231_134030963
seq2: B6Ng01-146D01.b_48_787

seq1  GAATTCTTCCACGAAAGTAACAAAATCTTCTATCTTTAGGACTCTGAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCCACGAAAGTAACAAAATCTTCTATCTTTAGGACTCTGAAAA  50

seq1  TTAATGGAAGGCTTTCAGCTGCCTGGTGCCAAGCTCCATAACTCCTTGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGGAAGGCTTTCAGCTGCCTGGTGCCAAGCTCCATAACTCCTTGAT  100

seq1  ACCACTGAAAAAAAATATCTGAGACCTGGAGTCCAGCCTGAAGCCCACTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACTGAAAAAAAATATCTGAGACCTGGAGTCCAGCCTGAAGCCCACTA  150

seq1  CCAACAGTCAAGTTGTGCTAGTATTCCTTCAAAAGCTAAAGCTTTCTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACAGTCAAGTTGTGCTAGTATTCCTTCAAAAGCTAAAGCTTTCTTCT  200

seq1  CAATGATGTCCTAGTTACTGCTCTAACAGAAAACAGTAAGACCCCAGTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGATGTCCTAGTTACTGCTCTAACAGAAAACAGTAAGACCCCAGTTA  250

seq1  CACAACTTTGTATTTGACCTAAGTTGCCATATTTAAGATGAAAAATTCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAACTTTGTATTTGACCTAAGTTGCCATATTTAAGATGAAAAATTCCT  300

seq1  GCCCCATTTATTCAAAATAAGTACATTTTTCAAACACATGTTTTAACTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCATTTATTCAAAATAAGTACATTTTTCAAACACATGTTTTAACTTG  350

seq1  CCAGGTACTTGAGTAAGTGGGTAGAAGTTGGGGCAAACCTGATTGTGGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTACTTGAGTAAGTGGGTAGAAGTTGGGGCAAACCTGATTGTGGGA  400

seq1  CCCTTTCTTCCTACTGGATTGCCTAGTCCAGCCCTGTTTGTGCCTTGCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTCTTCCTACTGGATTGCCTAGTCCAGCCCTGTTTGTGCCTTGCCT  450

seq1  TATTGTTACGTCACATTTGATCTGTATCTCTGGAAGGCCTGTTCTTTACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTTACGTCACATTTGATCTGTATCTCTGGAAGGCCTGTTCTTTACA  500

seq1  TAAGGGAAAGGGAAAAGCAGTGGATGGGGTGGGGGACATAGGGCAGAACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGGAAAGGGAAAAGCAGTGGATGGGGTGGGGGACATAGGGCAGAACT  550

seq1  GGGGGAGTGAAGGACCTGTATCCTGGCATGCAATCTAGGTGGGAGCAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGAGTGAAGGACCTGTATCCTGGCATGCAATCTAGGTGGGAGCAGAA  600

seq1  AAGCCTAATTAACTAAGAACCACTGAGCAGAAATGGCAGAATGACTTGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTAATTAACTAAGAACCACTGAGCAGAAATGGCAGAATGACTTGGC  650

seq1  TGATAGAATCAATTCCTCTTTCTCTTCCCTCCCTCCCTCCCTCCCTCCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAGAATCAATTCCTCTTTCTCTTCCCTCCCTCCCTCCCTCCCTCCCT  700

seq1  CCCTCCCTCCCTCCCTCCCTCCTTC-------CCTCCCTT  733
      ||||||||| ||||||||||| |||       ||||||||
seq2  CCCTCCCTCTCTCCCTCCCTCTTTCTCGCACTCCTCCCTT  740