BAC Information

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BAC

Clone NameB6Ng01-146D16
Chromosome3 (Build37)
Map Location 75,084,125 - 75,203,664
singlet/doubletdoublet
Overlap geneWdr49
Upstream geneLOC667434, LOC100041551, EG667459, BC050789, Serpini2
Downstream genePdcd10, Serpini1, Golph4, Fstl5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-146D16.bB6Ng01-146D16.g
ACCDH943428DH943429
length1,2551,003
definitionDH943428|Mus musculus domesticus DNA, BAC clone: B6Ng01-146D16, 5' end.DH943429|Mus musculus domesticus DNA, BAC clone: B6Ng01-146D16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(75,084,125 - 75,085,389)(75,203,081 - 75,203,664)
sequence
gaattcagttcatatcacccatgttgtacagcctacagctgccaggaacg
tcagctccaaagcatccagtgctccttctgccttctgaaggcaccagtga
agaaggccatatccatacacataagagtaaatctcaaaataaaaacctat
tgttaccagtcaccatttgcatcccttctttctaacacagaaaaacaagg
cagtagcccactcatgacttcatttcgtagctgactttctggcaaccatt
tctataaggataaccacaaagcatttttaaagtgataaaaataaagtacg
ggctggttgtgaagtactgaaataggtcttcactaaaataacaggatgcc
ctgacttacaaatgatagagttggtttatctcctgacctctggccttgtt
tttcacaataattgacaacttcctcagactgacaaccatagcaacattct
caaagattgcctgaaacaggaaaggtgctctgtaaacagcaataacaaca
cactttggataatctgtggatttcagacttctgtaaaccttctcccacac
ccagatacccagccacattctttttttttccagccttgaaaaacgtttta
atgctaaagtacaagaattaagagaaaaaagagtaaaaaacacacagaca
cggggaaaacgaaataaatctgacgtttgtagtaggccagccgcagaaag
aatccactgtgtagaagtgtaggaggaagtgctggcatgaccggacagcc
agcctccttggtgtactgcactttctaagaagcacggtacaccacaccac
actcctgaagtcagaacactggattctcaggaagcgtgaatagctggtgt
ctgtcctgtgaagagtctgcactctctgtgtctcctctgtgtgcatcctc
tgcagagagaccctggtggtatgagtgttcactatccagtccaaggtaat
gtgccaaccaatcacaggccataggctctcctattaaatggttgcttgat
gcagcaagcagatgctgttcctgaaactgtcttccacagttggtttatct
ctgtgccctttagcaacccacggtcatgctgtctgttgagggagcccagt
atgaagcattggaggaatcacagtgtgtgtcttcattagtctattggaac
cacttagtagttgtttcagtgctgactacgacaatagaactgtctagtac
attgctataaacaaaatttgtcggaaaataatatctatattctgctgaaa
taaat
gaattcagttgagtcctctggaagagcaacaatgtttttaaccattgact
gagctctctatagagacacaattcttaaaatattttgttgttgttgtttt
gtcatctattaaaaattgaagataatttttccatagactatattctgaag
atgatacctatctcccagttcttcccctcctccccaatcacccaaaccta
caccctttcttgctcctttcattagaaaacaaatagatatctaaacagtg
aagaaaaatattaaaatgagctagaatgaaaacaaacaatcttaatagag
taaaacaaacaaatgaacaaaaaaaacaaagcccccccccaaaaaaaaac
cacaagaaacacttaaggatacagagactaacatattggcaaatacaaaa
atcccataaaagcacaaaatcagaaataacaacatataagcaaaagatta
cctcagacaaaaccaaaaacaacaaacaaaacagatcaaaaacaaaattt
aaaaaatcccaaaacatcaacagaacaaaaataccccaaaatacaatcaa
aatcttagacaaggcattatgagacaaacagacaaacaaacaaacaaaca
aacaaaagacagaaacaaaagtcaaacaaacacaaaaaaatccctccaaa
aatactatttagttcatttattgttggatcatctaatactgtgcatcagg
cctagtcttaagagtgctttatacccaactagatcacattggagaatact
tctttttcattgtgagtggttatcaattagagactgtttctgggttagga
agggggacttgtgtgtacttctactctcagcaactggaattcatcaggtc
cagaccagtgcagaccctgtgaatgcttccacagtctgtgttgttcctat
gtgtaccagtcctactgtgttcagaaggccttgtttcttaggttttctcc
atccccttggctcttacattttttgcctcctattctgcactatttatcag
aac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_75084125_75085389
seq2: B6Ng01-146D16.b_46_1300

seq1  GAATTCAGTTCATATCACCCATGTTGTACAGCCTACAGCTGCCAGGAACG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTCATATCACCCATGTTGTACAGCCTACAGCTGCCAGGAACG  50

seq1  TCAGCTCCAAAGCATCCAGTGCTCCTTCTGCCTTCTGAAGGCACCAGTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTCCAAAGCATCCAGTGCTCCTTCTGCCTTCTGAAGGCACCAGTGA  100

seq1  AGAAGGCCATATCCATACACATAAGAGTAAATCTCAAAATAAAAACCTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGCCATATCCATACACATAAGAGTAAATCTCAAAATAAAAACCTAT  150

seq1  TGTTACCAGTCACCATTTGCATCCCTTCTTTCTAACACAGAAAAACAAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTACCAGTCACCATTTGCATCCCTTCTTTCTAACACAGAAAAACAAGG  200

seq1  CAGTAGCCCACTCATGACTTCATTTCGTAGCTGACTTTCTGGCAACCATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAGCCCACTCATGACTTCATTTCGTAGCTGACTTTCTGGCAACCATT  250

seq1  TCTATAAGGATAACCACAAAGCATTTTTAAAGTGATAAAAATAAAGTACG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATAAGGATAACCACAAAGCATTTTTAAAGTGATAAAAATAAAGTACG  300

seq1  GGCTGGTTGTGAAGTACTGAAATAGGTCTTCACTAAAATAACAGGATGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGTTGTGAAGTACTGAAATAGGTCTTCACTAAAATAACAGGATGCC  350

seq1  CTGACTTACAAATGATAGAGTTGGTTTATCTCCTGACCTCTGGCCTTGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTTACAAATGATAGAGTTGGTTTATCTCCTGACCTCTGGCCTTGTT  400

seq1  TTTCACAATAATTGACAACTTCCTCAGACTGACAACCATAGCAACATTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACAATAATTGACAACTTCCTCAGACTGACAACCATAGCAACATTCT  450

seq1  CAAAGATTGCCTGAAACAGGAAAGGTGCTCTGTAAACAGCAATAACAACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGATTGCCTGAAACAGGAAAGGTGCTCTGTAAACAGCAATAACAACA  500

seq1  CACTTTGGATAATCTGTGGATTTCAGACTTCTGTAAACCTTCTCCCACAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTGGATAATCTGTGGATTTCAGACTTCTGTAAACCTTCTCCCACAC  550

seq1  CCAGATACCCAGCCACATTCTTTTTTTTTCCAGCCTTGAAAAACGTTTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATACCCAGCCACATTCTTTTTTTTTCCAGCCTTGAAAAACGTTTTA  600

seq1  ATGCTAAAGTACAAGAATTAAGAGAAAAAAGAGTAAAAAACACACAGACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTAAAGTACAAGAATTAAGAGAAAAAAGAGTAAAAAACACACAGACA  650

seq1  CGGGGAAAACGAAATAAATCTGACGTTTGTAGTAGGCCAGCCGCAGAAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGGAAAACGAAATAAATCTGACGTTTGTAGTAGGCCAGCCGCAGAAAG  700

seq1  AATCCACTGTGTAGAAGTGTAGGAGGAAGTGCTGGCATGACCGGACAGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCACTGTGTAGAAGTGTAGGAGGAAGTGCTGGCATGACCGGACAGCC  750

seq1  AGCCTCCTTGGTGTACTGCAC-TTCTAAGAAGCACGGTACACCACACCAC  799
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AGCCTCCTTGGTGTACTGCACTTTCTAAGAAGCACGGTACACCACACCAC  800

seq1  ACTCCTGAAGTCAGAACACTGGATTCTCAGGAAGCGTGAATAGCTGGTGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCTGAAGTCAGAACACTGGATTCTCAGGAAGCGTGAATAGCTGGTGT  850

seq1  CTGTCCTGTGAAGAGTCTGCACTCTCTGTGTCTCCTCTGTGTGCATCCTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCTGTGAAGAGTCTGCACTCTCTGTGTCTCCTCTGTGTGCATCCTC  900

seq1  TGCAGAGAGACCCTGGTGGTATGAGTGTTCACTATCCAGTCCAAGGTAAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAGAGACCCTGGTGGTATGAGTGTTCACTATCCAGTCCAAGGTAAT  950

seq1  GTGCCAACCAATCACAGGCCATAGGCCTCTCCTATTTAAATGGTTGCTTG  999
      ||||||||||||||||||||||||| |||||||| |||||||||||||||
seq2  GTGCCAACCAATCACAGGCCATAGG-CTCTCCTA-TTAAATGGTTGCTTG  998

seq1  AATGCAGCAAAGCAGATGCTGTTCCCTGAAACTGTC-TCCACAG-TGGTT  1047
       ||||||| |||||||||||||| |||||||||||| ||||||| |||||
seq2  -ATGCAGC-AAGCAGATGCTGTT-CCTGAAACTGTCTTCCACAGTTGGTT  1045

seq1  TATCTCTGTGCCCTTTAGCAACCCACGGTCATTGCTGTCTTGTTGAGGGA  1097
      ||||||||||||||||||||||||||||||| ||||||| ||||||||||
seq2  TATCTCTGTGCCCTTTAGCAACCCACGGTCA-TGCTGTC-TGTTGAGGGA  1093

seq1  AGCCCCAGTAATGAAAGCA-TGGAGACATCACAGTTTGTGTGTCTTCCAT  1146
         |||||| ||| ||||| |||||  |||||||  |||||||||| |||
seq2  --GCCCAGT-ATG-AAGCATTGGAGGAATCACAG--TGTGTGTCTT-CAT  1136

seq1  TAGTCTATTGAAACCCACTTTAGTAGTTGTTTTCAGTGCTGACTACGACA  1196
      |||||||||| || |||| |||||||||| ||||||||||||||||||| 
seq2  TAGTCTATTGGAA-CCAC-TTAGTAGTTG-TTTCAGTGCTGACTACGAC-  1182

seq1  AATAAGACTG-CTATGACTATGC-ATAACAAATATTTGCATGAAAATAAT  1244
      ||||  |||| |||  ||  ||| ||||  || |||||   |||||||||
seq2  AATAGAACTGTCTAGTACATTGCTATAAACAAAATTTGTCGGAAAATAAT  1232

seq1  ATCTATATTC-CCTG-AATAAAT  1265
      ||||||||||  ||| |||||||
seq2  ATCTATATTCTGCTGAAATAAAT  1255

seq1: chr3_75203081_75203664
seq2: B6Ng01-146D16.g_66_649 (reverse)

seq1  TGTCTGTTTGTCTCATAATGCCTTGTCTAAGATTTTGATTGTATTTTGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGTTTGTCTCATAATGCCTTGTCTAAGATTTTGATTGTATTTTGGG  50

seq1  GTATTTTTGTTCTGTTGATGTTTTGGGATTTTTTAAATTTTGTTTTTGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTTTGTTCTGTTGATGTTTTGGGATTTTTTAAATTTTGTTTTTGAT  100

seq1  CTGTTTTGTTTGTTGTTTTTGGTTTTGTCTGAGGTAATCTTTTGCTTATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTTGTTTGTTGTTTTTGGTTTTGTCTGAGGTAATCTTTTGCTTATA  150

seq1  TGTTGTTATTTCTGATTTTGTGCTTTTATGGGATTTTTGTATTTGCCAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTTATTTCTGATTTTGTGCTTTTATGGGATTTTTGTATTTGCCAAT  200

seq1  ATGTTAGTCTCTGTATCCTTAAGTGTTTCTTGTGGTTTTTTTTTGGGGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTAGTCTCTGTATCCTTAAGTGTTTCTTGTGGTTTTTTTTTGGGGGG  250

seq1  GGGCTTTGTTTTTTTTGTTCATTTGTTTGTTTTACTCTATTAAGATTGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTTTGTTTTTTTTGTTCATTTGTTTGTTTTACTCTATTAAGATTGTT  300

seq1  TGTTTTCATTCTAGCTCATTTTAATATTTTTCTTCACTGTTTAGATATCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTCATTCTAGCTCATTTTAATATTTTTCTTCACTGTTTAGATATCT  350

seq1  ATTTGTTTTCTAATGAAAGGAGCAAGAAAGGGTGTAGGTTTGGGTGATTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTTTTCTAATGAAAGGAGCAAGAAAGGGTGTAGGTTTGGGTGATTG  400

seq1  GGGAGGAGGGGAAGAACTGGGAGATAGGTATCATCTTCAGAATATAGTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGAGGGGAAGAACTGGGAGATAGGTATCATCTTCAGAATATAGTCT  450

seq1  ATGGAAAAATTATCTTCAATTTTTAATAGATGACAAAACAACAACAACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAAAATTATCTTCAATTTTTAATAGATGACAAAACAACAACAACAA  500

seq1  AATATTTTAAGAATTGTGTCTCTATAGAGAGCTCAGTCAATGGTTAAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTTAAGAATTGTGTCTCTATAGAGAGCTCAGTCAATGGTTAAAAA  550

seq1  CATTGTTGCTCTTCCAGAGGACTCAACTGAATTC  584
      ||||||||||||||||||||||||||||||||||
seq2  CATTGTTGCTCTTCCAGAGGACTCAACTGAATTC  584