BAC Information

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BAC

Clone NameB6Ng01-147B21
Chromosome3 (Build37)
Map Location 57,295,165 - 57,295,936
singlet/doubletsinglet
Overlap geneWwtr1
Upstream geneLOC100040139, LOC666585, Tm4sf1, LOC383862, Tm4sf4
Downstream geneCommd2, Gm410, EG623114, Rnf13, LOC675537, Pfn2, EG433594, LOC100040216, 4921539H07Rik, Tsc22d2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-147B21.bB6Ng01-147B21.g
ACCDH944085DH944086
length1,139775
definitionDH944085|Mus musculus domesticus DNA, BAC clone: B6Ng01-147B21, 5' end.DH944086|Mus musculus domesticus DNA, BAC clone: B6Ng01-147B21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtcccatatcttcaaggcttttccccact
ttctcctctataattttcagtgtctctggttttatgcgaagttccttgat
ccacttagatttgaccttagtacaaggagataagtatggatcgattcgca
ttcttctacacgataacaaccagttgtgccagcaccaattcttgaaaatg
ctgtctttcttccactggatggttttagctcccttgtcgaagatcaagtg
accataggtgtgtgggttcatttctgggtcttcaattctattccattggt
ctacttgtctgtctctataccagtaccatgcagtttttatcacaattgct
ctgtagtacagctttaggtccggcatggtgattccgccagaagttctttt
atccttgagaagactttttgctatcctaggttttttgttattccagacaa
atttgcaaattgctccttccaattcgttgaagaattgagttggaattttg
atggggattgcattgaatctgtagattgcttttgggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatcttttccatct
tctgagatcttccttaatttctttcttcagagattggaagtttttatcat
acagatccttcacttccttagttagagtcacgccaagatattttatatta
ttgtgactatagaaggtgttgttcccttatttctttctcagcctgtttat
cttgtatagagaaaggcattgacttgttgagttaatttatatcagcttac
tcaccgagctgtttaccaggttagaggtcctttgtagaattctaagcatt
atatgatgtccttatcactctgcacaaggaatgattgga
gaattcactttgtagaacaggctggcctcgaactcagaaatctgcctgcc
tctgcctcccgagtgctgagtgctgggattagagtgtgccaccatgcccc
cggctttttttttttaagactataggccagtgatttggtcgacgaccttt
aactttgcatctgtctcatgcttcctatgacttaggtgttggtcatactg
ttaaactcgtttggcaggaagcaacagggatgtgttattgtcacgtgacc
ttaagaggcacaccatggactggggatgttaacttttatcattttggttg
agagatttgggggtggggacagagttgctgggtccctggctgcagtgcat
ttaatattcagtatggagaatgagctctgaggaaaagcatttccatcttc
agtcagtgaggtgtgcgcagagacatggcgatgcccgtgggatgaatgat
catcaaaagataatatccagcgtggttcagttaggcttctcagcgtattt
acctgatacaatttacataacaaccaatacattgtatagctatctgcata
gataagtttaactttagcctattaaagtctgttattgaattcagaaatat
tgcttgaatttgcttatattttctggccttattttatgtatagcttaagg
acttgagttaactctccttttggatgtgtctccatgcatgcttcaattca
ttctggaaacattagtttggatatttttacgctacttattttttattttt
catagcatgaaaagcttttggcatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_57295165_57295936
seq2: B6Ng01-147B21.g_69_842 (reverse)

seq1  ATGCCAAAAGC-TCTCATGCTATGAAAAAT-AAAAATAAGTAGCGTAAAA  48
      ||||||||||| | |||||||||||||||| |||||||||||||||||||
seq2  ATGCCAAAAGCTTTTCATGCTATGAAAAATAAAAAATAAGTAGCGTAAAA  50

seq1  ATATCCAAACTAATGTTTCCAGAATGAATTGAAGCATGCATGGAGACACA  98
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCCAAACTAATGTTTCCAGAATGAATTGAAGCATGCATGGAGACACA  100

seq1  TCCAAAAGGAGAGTTAACTCAAGTCCTTAAGCTATACATAAAATAAGGCC  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAAAGGAGAGTTAACTCAAGTCCTTAAGCTATACATAAAATAAGGCC  150

seq1  AGAAAATATAAGCAAATTCAAGCAATATTTCTGAATTCAATAACAGACTT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATATAAGCAAATTCAAGCAATATTTCTGAATTCAATAACAGACTT  200

seq1  TAATAGGCTAAAGTTAAACTTATCTATGCAGATAGCTATACAATGTATTG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGGCTAAAGTTAAACTTATCTATGCAGATAGCTATACAATGTATTG  250

seq1  GTTGTTATGTAAATTGTATCAGGTAAATACGCTGAGAAGCCTAACTGAAC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTATGTAAATTGTATCAGGTAAATACGCTGAGAAGCCTAACTGAAC  300

seq1  CACGCTGGATATTATCTTTTGATGATCATTCATCCCACGGGCATCGCCAT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGCTGGATATTATCTTTTGATGATCATTCATCCCACGGGCATCGCCAT  350

seq1  GTCTCTGCGCACACCTCACTGACTGAAGATGGAAATGCTTTTCCTCAGAG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTGCGCACACCTCACTGACTGAAGATGGAAATGCTTTTCCTCAGAG  400

seq1  CTCATTCTCCATACTGAATATTAAATGCACTGCAGCCAGGGACCCAGCAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTCTCCATACTGAATATTAAATGCACTGCAGCCAGGGACCCAGCAA  450

seq1  CTCTGTCCCCACCCCCAAATCTCTCAACCAAAATGATAAAAGTTAACATC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTCCCCACCCCCAAATCTCTCAACCAAAATGATAAAAGTTAACATC  500

seq1  CCCAGTCCATGGTGTGCCTCTTAAGGTCACGTGACAATAACACATCCCTG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTCCATGGTGTGCCTCTTAAGGTCACGTGACAATAACACATCCCTG  550

seq1  TTGCTTCCTGCCAAACGAGTTTAACAGTATGACCAACACCTAAGTCATAG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTCCTGCCAAACGAGTTTAACAGTATGACCAACACCTAAGTCATAG  600

seq1  GAAGCATGAGACAGATGCAAAGTTAAAGGTCGTCGACCAAATCACTGGCC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCATGAGACAGATGCAAAGTTAAAGGTCGTCGACCAAATCACTGGCC  650

seq1  TATAGTCTTAAAAAAAAAAAGCCGGGGGCATGGTGGCACACTCTAATCCC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTCTTAAAAAAAAAAAGCCGGGGGCATGGTGGCACACTCTAATCCC  700

seq1  AGCACTCAGCACTCGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCGAGGC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTCAGCACTCGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCGAGGC  750

seq1  CAGCCTGTTCTACAAAGTGAATTC  772
      ||||||||||||||||||||||||
seq2  CAGCCTGTTCTACAAAGTGAATTC  774