BAC Information

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BAC

Clone NameB6Ng01-147E03
Chromosome3 (Build37)
Map Location 60,655,933 - 60,816,893
singlet/doubletdoublet
Overlap geneLOC100040501, EG666853, P2ry1
Upstream geneEG666803, C130079G13Rik, LOC676914, Aadacl2, Aadac, Sucnr1, LOC669823, LOC100040485, Mbnl1, LOC676933
Downstream geneRap2b, LOC666891, LOC669910
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-147E03.bB6Ng01-147E03.g
ACCDH944187DH944188
length1,0981,107
definitionDH944187|Mus musculus domesticus DNA, BAC clone: B6Ng01-147E03, 5' end.DH944188|Mus musculus domesticus DNA, BAC clone: B6Ng01-147E03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(60,815,788 - 60,816,893)(60,655,933 - 60,657,043)
sequence
gaattcaccctccaccctcactccacccccaccccactgccaatttccac
atgtagcttccttcctcaggaaatctctttgcctggttttccatttctta
tcttgttacttcaaagcaatgacctataatggcttttctctccaccaaca
tacttcttgagcagtcagaaatattgttttatggtttaaatgtgccctca
ataacagcaatcctttgcagcctataaatccaatggactctttatagttg
tttcatgactcatgaaagagaatgacatcttccacaagattctattttga
gactgagttcctccatagtggggcaactgtcatgggtcttcagtgactta
gttctttctgcttacattttctgttccattcttcttggaaaaactatagc
ccaccaaccctgcccctccttctccattgatctttccttctgtgcagata
ctctctgggggtgctgtggctactttcttgattacagctaaaacgtgcac
agggacaattactaaacttctttctcttgcaataaatcagtcctgaactg
tggaatactgtttgtgataacattacattgttgcatgtagattctgtgtg
tctcccactcagcaagcatgatggacagaaagaccacttccaggtaagag
ataccactaaaacattttttttaaattttaaatgcaaatatttgtgcatt
caaagaataatgatagtgatgagtaattttaaaataaataaatgaatgtg
attgttttattccacacactgttaagttgttccagaaagacagcaaagca
actcaagattcttaagtaaaagacagataatggttagcaaggcaatgtct
ctggggacatgtcattctttcagctggcctttcctttttagacaggcttt
tcaagaatgtctcaatctttgttcctatttcaagctctgcaggcatcttt
ctgatatataattagatcccccagaacacaagcagatgcctgttattgtg
actgggatatgaccattgtacatgagaatcgcatctagctagtaaatgat
tctcttgtcgtttgctcgggtgagtcaatcctcaaggttgctgactct
gaattccttgttttccatattaaaaaaatgttaaggtaagatttcttttc
cagcctccttaatggagcaaatgaaaaataaaaacatctctgagtttatt
taattaaaaacaattaacttagtgatattttttacgctgctgcatattaa
gtcagggcattggacatgtaagacaagagctctagtagtaacttgttccc
tggtctcccaatttgagatgcacataaattttgtaaagtaatcaatagaa
gttctgaatagaagtaatagaattttgtgaactttatataatttatcccc
ctagttatctcagaagattcagtgtctgtccaacatccccaaaagcagaa
tattagataaggcaggcatgaattataaatattttctagagtagagaatt
atgttaagagtgcctgatattcctattactgcttgataaatatgtatgct
tgcctattatcatcaactagcaagagatagcaataaaacacagtttttta
aatagcaaatttcatataccaattagaaaattctttcagacttgtagcaa
cgtgaatgatactcccaagaaaaccattgggtacactaattttctagatg
ttaaaaacactaataaacatttctatgcaaggaacttaaggaaaaaacta
gatattcagcagaatgttagacacagaggaaggcatataccccagcaact
atgctttggtgtccagaacccaaatgtgggacaacatcttacctgttcca
gctatacttccagaagccatggctgtagaaccaattctattcaggctcaa
agtcaaagaggtctctacctatgggattatcaggtctgtaactgtctgtg
aggagtactttctacagttacaactgagtgtagtaattatcagctctgag
aaacagtgatcagccagggatttagacagggccacagtggtacagtcacc
atagatatgttaccacataagagatggtcctagcatctccttatgaagaa
atcatccttgaattaaggacaaaagaagatactggggtagaacaatgtgc
tatgggaaagtctttactgggaattgtctcactgggaatattaagaaata
tgccaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_60815788_60816893
seq2: B6Ng01-147E03.b_46_1143 (reverse)

seq1  AGAGTTCAGCAACACTGAGGGACTGACTCACACCGAGCAAACCGACAAGA  50
      |||| ||||||||  ||| ||| |||||||| ||||||||| ||||||||
seq2  AGAG-TCAGCAACCTTGA-GGATTGACTCAC-CCGAGCAAA-CGACAAGA  46

seq1  GAATCATTTACTAGCTAGATTGCCGATTCTCATGTACAATGGTCATATCC  100
      ||||||||||||||||||||   |||||||||||||||||||||||||||
seq2  GAATCATTTACTAGCTAGAT--GCGATTCTCATGTACAATGGTCATATCC  94

seq1  CAGTCACAATAACAGGCATCTGCCTTTGTGTTCTGGGGGATCTAATTATA  150
      |||||||||||||||||||||||  |||||||||||||||||||||||||
seq2  CAGTCACAATAACAGGCATCTGC--TTGTGTTCTGGGGGATCTAATTATA  142

seq1  TATCAGAAAGATGCCTGCAGAGCTTGAAATAGGAACAAAGATTGAGACAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGAAAGATGCCTGCAGAGCTTGAAATAGGAACAAAGATTGAGACAT  192

seq1  TCTTGAAAAGCCTGTCTAAAAAGGAAAGGCCAGCTGAAAGAATGACATGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGAAAAGCCTGTCTAAAAAGGAAAGGCCAGCTGAAAGAATGACATGT  242

seq1  CCCCAGAGACATTGCCTTGCTAACCATTATCTGTCTTTTACTTAAGAATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGAGACATTGCCTTGCTAACCATTATCTGTCTTTTACTTAAGAATC  292

seq1  TTGAGTTGCTTTGCTGTCTTTCTGGAACAACTTAACAGTGTGTGGAATAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTTGCTTTGCTGTCTTTCTGGAACAACTTAACAGTGTGTGGAATAA  342

seq1  AACAATCACATTCATTTATTTATTTTAAAATTACTCATCACTATCATTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATCACATTCATTTATTTATTTTAAAATTACTCATCACTATCATTAT  392

seq1  TCTTTGAATGCACAAATATTTGCATTTAAAATTTAAAAAAAATGTTTTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGAATGCACAAATATTTGCATTTAAAATTTAAAAAAAATGTTTTAG  442

seq1  TGGTATCTCTTACCTGGAAGTGGTCTTTCTGTCCATCATGCTTGCTGAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATCTCTTACCTGGAAGTGGTCTTTCTGTCCATCATGCTTGCTGAGT  492

seq1  GGGAGACACACAGAATCTACATGCAACAATGTAATGTTATCACAAACAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGACACACAGAATCTACATGCAACAATGTAATGTTATCACAAACAGT  542

seq1  ATTCCACAGTTCAGGACTGATTTATTGCAAGAGAAAGAAGTTTAGTAATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCACAGTTCAGGACTGATTTATTGCAAGAGAAAGAAGTTTAGTAATT  592

seq1  GTCCCTGTGCACGTTTTAGCTGTAATCAAGAAAGTAGCCACAGCACCCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCTGTGCACGTTTTAGCTGTAATCAAGAAAGTAGCCACAGCACCCCC  642

seq1  AGAGAGTATCTGCACAGAAGGAAAGATCAATGGAGAAGGAGGGGCAGGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGTATCTGCACAGAAGGAAAGATCAATGGAGAAGGAGGGGCAGGGT  692

seq1  TGGTGGGCTATAGTTTTTCCAAGAAGAATGGAACAGAAAATGTAAGCAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGGCTATAGTTTTTCCAAGAAGAATGGAACAGAAAATGTAAGCAGA  742

seq1  AAGAACTAAGTCACTGAAGACCCATGACAGTTGCCCCACTATGGAGGAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACTAAGTCACTGAAGACCCATGACAGTTGCCCCACTATGGAGGAAC  792

seq1  TCAGTCTCAAAATAGAATCTTGTGGAAGATGTCATTCTCTTTCATGAGTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCTCAAAATAGAATCTTGTGGAAGATGTCATTCTCTTTCATGAGTC  842

seq1  ATGAAACAACTATAAAGAGTCCATTGGATTTATAGGCTGCAAAGGATTGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAACAACTATAAAGAGTCCATTGGATTTATAGGCTGCAAAGGATTGC  892

seq1  TGTTATTGAGGGCACATTTAAACCATAAAACAATATTTCTGACTGCTCAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATTGAGGGCACATTTAAACCATAAAACAATATTTCTGACTGCTCAA  942

seq1  GAAGTATGTTGGTGGAGAGAAAAGCCATTATAGGTCATTGCTTTGAAGTA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTATGTTGGTGGAGAGAAAAGCCATTATAGGTCATTGCTTTGAAGTA  992

seq1  ACAAGATAAGAAATGGAAAACCAGGCAAAGAGATTTCCTGAGGAAGGAAG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGATAAGAAATGGAAAACCAGGCAAAGAGATTTCCTGAGGAAGGAAG  1042

seq1  CTACATGTGGAAATTGGCAGTGGGGTGGGGGTGGAGTGAGGGTGGAGGGT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATGTGGAAATTGGCAGTGGGGTGGGGGTGGAGTGAGGGTGGAGGGT  1092

seq1  GAATTC  1106
      ||||||
seq2  GAATTC  1098

seq1: chr3_60655933_60657043
seq2: B6Ng01-147E03.g_68_1174

seq1  GAATTCCTTGTTTTCCATATTAAAAAAATGTTAAGGTAAGATTTCTTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTGTTTTCCATATTAAAAAAATGTTAAGGTAAGATTTCTTTTC  50

seq1  CAGCCTCCTTAATGGAGCAAATGAAAAATAAAAACATCTCTGAGTTTATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTCCTTAATGGAGCAAATGAAAAATAAAAACATCTCTGAGTTTATT  100

seq1  TAATTAAAAACAATTAACTTAGTGATATTTTTTACGCTGCTGCATATTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAAAAACAATTAACTTAGTGATATTTTTTACGCTGCTGCATATTAA  150

seq1  GTCAGGGCATTGGACATGTAAGACAAGAGCTCTAGTAGTAACTTGTTCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGGGCATTGGACATGTAAGACAAGAGCTCTAGTAGTAACTTGTTCCC  200

seq1  TGGTCTCCCAATTTGAGATGCACATAAATTTTGTAAAGTAATCAATAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTCCCAATTTGAGATGCACATAAATTTTGTAAAGTAATCAATAGAA  250

seq1  GTTCTGAATAGAAGTAATAGAATTTTGTGAACTTTATATAATTTATCCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGAATAGAAGTAATAGAATTTTGTGAACTTTATATAATTTATCCCC  300

seq1  CTAGTTATCTCAGAAGATTCAGTGTCTGTCCAACATCCCCAAAAGCAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTATCTCAGAAGATTCAGTGTCTGTCCAACATCCCCAAAAGCAGAA  350

seq1  TATTAGATAAGGCAGGCATGAATTATAAATATTTTCTAGAGTAGAGAATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGATAAGGCAGGCATGAATTATAAATATTTTCTAGAGTAGAGAATT  400

seq1  ATGTTAAGAGTGCCTGATATTCCTATTACTGCTTGATAAATATGTATGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTAAGAGTGCCTGATATTCCTATTACTGCTTGATAAATATGTATGCT  450

seq1  TGCCTATTATCATCAACTAGCAAGAGATAGCAATAAAACACAGTTTTTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTATTATCATCAACTAGCAAGAGATAGCAATAAAACACAGTTTTTTA  500

seq1  AATAGCAAATTTCATATACCAATTAGAAAATTCTTTCAGACTTGTAGCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGCAAATTTCATATACCAATTAGAAAATTCTTTCAGACTTGTAGCAA  550

seq1  CGTGAATGATACTCCCAAGAAAACCATTGGGTACACTAATTTTCTAGATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGAATGATACTCCCAAGAAAACCATTGGGTACACTAATTTTCTAGATG  600

seq1  TTAAAAACACTAATAAACATTTCTATGCAAGGAACTTAAGGAAAAAACTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAACACTAATAAACATTTCTATGCAAGGAACTTAAGGAAAAAACTA  650

seq1  GATATTCAGCAGAATGTTAGACACAGAGGAAGGCATATACCCCAGCAACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTCAGCAGAATGTTAGACACAGAGGAAGGCATATACCCCAGCAACT  700

seq1  ATGCTTTGGTGTCCAGAACCCAAATGTGGGACAACATCTTACCTGTTCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTTGGTGTCCAGAACCCAAATGTGGGACAACATCTTACCTGTTCCA  750

seq1  GCTATACTTCCAGAAGCCATGGCTGTAGAACCAATTCTATTCAGGCTCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATACTTCCAGAAGCCATGGCTGTAGAACCAATTCTATTCAGGCTCAA  800

seq1  AGTCAAAGAGGTCTCTACCTATGGGATTATCAGGTCTGTAACTGTCTGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAAAGAGGTCTCTACCTATGGGATTATCAGGTCTGTAACTGTCTGTG  850

seq1  AGGAGTACTTTCTACAGTTACAACTGAGTGTAGTAATTATCAGCTCTGAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGTACTTTCTACAGTTACAACTGAGTGTAGTAATTATCAGCTCTGAG  900

seq1  AAACAGTGATCAGCCAGGGATTTAGACAGGGCCACAGTGGTACAGTCACC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGTGATCAGCCAGGGATTTAGACAGGGCCACAGTGGTACAGTCACC  950

seq1  ATAGATATGTTA-CACATAAGAGATGGTTCTAAGCATCT-CTTATGAAGA  998
      |||||||||||| ||||||||||||||| || ||||||| ||||||||||
seq2  ATAGATATGTTACCACATAAGAGATGGTCCT-AGCATCTCCTTATGAAGA  999

seq1  AATCATCCTTGAATTAAGGACAAAAGAGTATACTGGGGTAGGAACAAATG  1048
      |||||||||||||||||||||||||||  ||||||||||| |||| ||||
seq2  AATCATCCTTGAATTAAGGACAAAAGAAGATACTGGGGTA-GAAC-AATG  1047

seq1  TGCTATGGTAATGTCTTTACTGTGGAATTGTCTACACTGGGATATATTAA  1098
      |||||||| || |||||||||| |||||||||| |||||||| |||||||
seq2  TGCTATGGGAAAGTCTTTACTG-GGAATTGTCT-CACTGGGA-ATATTAA  1094

seq1  GAAATATGCCAGA  1111
      |||||||||||||
seq2  GAAATATGCCAGA  1107