BAC Information

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BAC

Clone NameB6Ng01-147L14
Chromosome3 (Build37)
Map Location 141,953,676 - 142,112,674
singlet/doubletdoublet
Overlap genePdlim5
Upstream geneUnc5c, LOC100039923, Bmpr1b, Gabarapl2-ps3
Downstream geneGbp5, Gbp6, Gbp3, Gbp1, Gbp2, EG621605, Ccbl2, Gtf2b, Pkn2, LOC100040053, LOC100039883, 1700001N15Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-147L14.bB6Ng01-147L14.g
ACCDH944522DH944523
length1,1281,153
definitionDH944522|Mus musculus domesticus DNA, BAC clone: B6Ng01-147L14, 5' end.DH944523|Mus musculus domesticus DNA, BAC clone: B6Ng01-147L14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(141,953,676 - 141,954,783)(142,111,512 - 142,112,674)
sequence
gaattcttctgacaaatggagattctccatagatacttaaaagaacagcc
aagttacactcatacaagaatttatcagcctaggaaataggaggtttgtg
gtattgcaattttcatgagaaggtctgctagagcagaaccccctggtgct
agctttcacaaggctcaaaggagtagcacaaattgtgatgagggtgtgaa
atccttacctgtcattagctgaccttaggcagagctgttttatctttact
gtaaatattacctggttcctgtaagtccttcaaaagtcattcctttgttt
tgtgtcaggtaacttcaatgtacatttccagccttgacctcctacccctt
tgctttctgtgttatataagactggtgtacactttgtgacaatacattca
gattctacacaatctcttgtgtcgcttctgtttgtcattcattcgccgac
tccttgttcacctgcaactagagacccattctaagcagacagggaccaaa
aagggtctgtggcaacccgggtatttggtgattcaaaatactgtcagtga
ggtaactgataacaactgtagaatgaagcaaagaggaggcactgagacag
gtaacccagagatgagaccctgagacagtcagaagactgttaaccatgaa
ccttagtgaggaaagtaagagatcgatgaattgccttaagtggtttatgc
tcaggaatttaaataaatgggaatccctaactagtgtctactgacctcag
ccttctctttcatatggcatatcatgctgccatatataagccacacagta
aagtaaaaccccctttgcattttttttgtcacactgtatgttcttctacg
cttccccagcattcttgttctcctatgatctagccgcttgaaagtgagtg
gcacaaagtaaggacttcatagagcttttgctggactttttctatttcat
gtgaaggtcttcttctgccatccaagctcaccctgaactatccattctcc
ttctttcaccaccttatgtaactacactacagttgcacgacattgatatt
ttgtctagattactacttaaatgccaaccaaagtaaatgctttagaaaat
agtgtgaatatggtaaagaaatggctag
gaattcttaactgttgagccatcactccagctgctaaaattatctataac
aaaaataatactaattagtaactctaccccccaaaacccctcaaaattag
cttacttttaaatgcattttactccttaccaaaatgtccaaatgtctaaa
tcaatttaaaatacccattgtgacttcccttttacacaatttgtaactaa
acagttgtaatttaattctgagctattttgcttgctttactgtctgtgta
ttttaataaaataaatatccttaacagcttgtatttagagaacctccttc
agaaatatttccctgaagtagaacatatctctaattagttagtaacagtc
caagggttttccagaaaatggtgggtttccttatttgtgcacaaatatca
tagttaacaagaagagttcagaaaaaaatttaacaggggtcactatgcca
aattcctgaggatgccaaagctctgtctgcagagataagcttgctgaact
gaaagtttatggggtcattcaatggtttaggtttaaattctgggtctcct
tctcaaataacaaaattgcagcaatatctctcatccaccactaattaaat
gcaaagtaaggagagattcccacagtgagactcctagagtgagatagagg
tcggtgctaagctgctctcaggactaactgggaatcatttgtctttataa
tcgacttgcagattcagcttctattagaagaccttcactctgctgcatcc
tcctacaccagcactgcttcagcggttccgggagagctccttccctacca
taccgttcttgtaagtcctgcccttctaacacatttttcatcccctttat
ttaaagggggtctatgggtgtttttgtctgcaggtatgtaagggcatcat
atgtatgtagtcccgtgaaagccagaagagagcatagaaactggagctct
agaagttgtgagccttcgtgtgaacactggcaacgaagccagtctctgga
gagcagtcagtgctctttaccactaaaccatccctcaggaccatatttac
attttaacctaatgcaggttttcttatccttataattccctataggctag
gattgttagaaacaaaatgcattggaatacctaaacctataggattctct
tac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_141953676_141954783
seq2: B6Ng01-147L14.b_68_1172

seq1  TCTCCATAGATACTTAAAAGAACAGCCAAGTTACACTCATACAAGAATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCATAGATACTTAAAAGAACAGCCAAGTTACACTCATACAAGAATTT  50

seq1  ATCAGCCTAGGAAATAGGAGGTTTGTGGTATTGCAATTTTCATGAGAAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGCCTAGGAAATAGGAGGTTTGTGGTATTGCAATTTTCATGAGAAGG  100

seq1  TCTGCTAGAGCAGAACCCCCTGGTGCTAGCTTTCACAAGGCTCAAAGGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTAGAGCAGAACCCCCTGGTGCTAGCTTTCACAAGGCTCAAAGGAG  150

seq1  TAGCACAAATTGTGATGAGGGTGTGAAATCCTTACCTGTCATTAGCTGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCACAAATTGTGATGAGGGTGTGAAATCCTTACCTGTCATTAGCTGAC  200

seq1  CTTAGGCAGAGCTGTTTTATCTTTACTGTAAATATTACCTGGTTCCTGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGGCAGAGCTGTTTTATCTTTACTGTAAATATTACCTGGTTCCTGTA  250

seq1  AGTCCTTCAAAAGTCATTCCTTTGTTTTGTGTCAGGTAACTTCAATGTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCTTCAAAAGTCATTCCTTTGTTTTGTGTCAGGTAACTTCAATGTAC  300

seq1  ATTTCCAGCCTTGACCTCCTACCCCTTTGCTTTCTGTGTTATATAAGACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCAGCCTTGACCTCCTACCCCTTTGCTTTCTGTGTTATATAAGACT  350

seq1  GGTGTACACTTTGTGACAATACATTCAGATTCTACACAATCTCTTGTGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTACACTTTGTGACAATACATTCAGATTCTACACAATCTCTTGTGTC  400

seq1  GCTTCTGTTTGTCATTCATTCGCCGACTCCTTGTTCACCTGCAACTAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTGTTTGTCATTCATTCGCCGACTCCTTGTTCACCTGCAACTAGAG  450

seq1  ACCCATTCTAAGCAGACAGGGACCAAAAAGGGTCTGTGGCAACCCGGGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCATTCTAAGCAGACAGGGACCAAAAAGGGTCTGTGGCAACCCGGGTA  500

seq1  TTTGGTGATTCAAAATACTGTCAGTGAGGTAACTGATAACAACTGTAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTGATTCAAAATACTGTCAGTGAGGTAACTGATAACAACTGTAGAA  550

seq1  TGAAGCAAAGAGGAGGCACTGAGACAGGTAACCCAGAGATGAGACCCTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCAAAGAGGAGGCACTGAGACAGGTAACCCAGAGATGAGACCCTGA  600

seq1  GACAGTCAGAAGACTGTTAACCATGAACCTTAGTGAGGAAAGTAAGAGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGTCAGAAGACTGTTAACCATGAACCTTAGTGAGGAAAGTAAGAGAT  650

seq1  CGATGAATTGCCTTAAGTGGTTTATGCTCAGGAATTTAAATAAATGGGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATGAATTGCCTTAAGTGGTTTATGCTCAGGAATTTAAATAAATGGGAA  700

seq1  TCCCTAACTAGTGTCTACTGACCTCAGCCTTCTCTTTCATATGGCATATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTAACTAGTGTCTACTGACCTCAGCCTTCTCTTTCATATGGCATATC  750

seq1  ATGCTGCCATATATAAGCCACACAGTAAAGTAAAACCCCCTTTGCATTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGCCATATATAAGCCACACAGTAAAGTAAAACCCCCTTTGCATTTT  800

seq1  TTTTGTCACACTGTATGTTCTTCTACGCTTCCCCAGCATTCTTGTTCTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTCACACTGTATGTTCTTCTACGCTTCCCCAGCATTCTTGTTCTCC  850

seq1  TATGATCTAGCCGCTGGAAAGTGAGTGGCACAAAGTAAGGACTTCATAGA  900
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TATGATCTAGCCGCTTGAAAGTGAGTGGCACAAAGTAAGGACTTCATAGA  900

seq1  GCTTTTGCTGGACTTTTTCTATTCCATGTGAAGGTCTTCTTCTGCCATCC  950
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GCTTTTGCTGGACTTTTTCTATTTCATGTGAAGGTCTTCTTCTGCCATCC  950

seq1  AAGCTCACCCTGAACTATCCATTCTCC-TCTCTCACCACCTTATGTAACT  999
      ||||||||||||||||||||||||||| ||| ||||||||||||||||||
seq2  AAGCTCACCCTGAACTATCCATTCTCCTTCTTTCACCACCTTATGTAACT  1000

seq1  ACAACTACAGGTGCACGACATTGATATTTGTTCTAGATTACTACTTATAA  1049
      || ||||||| ||||||||||||||||||  |||||||||||||||| ||
seq2  AC-ACTACAGTTGCACGACATTGATATTTTGTCTAGATTACTACTTA-AA  1048

seq1  TGCCCAACACAAAGTAAATGCTATAGAAATAGGTGTG-ATATTGTGTAGA  1098
      || ||||| ||||||||||||| ||||||   ||||| |||| ||  |||
seq2  TG-CCAAC-CAAAGTAAATGCTTTAGAAAATAGTGTGAATATGGTAAAGA  1096

seq1  GAATGGCTAG  1108
       |||||||||
seq2  -AATGGCTAG  1105

seq1: chr3_142111512_142112674
seq2: B6Ng01-147L14.g_71_1223 (reverse)

seq1  GTAAGAG-ATCCATTAGG-TTAGGTATTTCAAATGCATTTTTGGTTTCTA  48
      ||||||| ||||  |||| ||||||| ||| ||||||||||  |||||||
seq2  GTAAGAGAATCCTATAGGTTTAGGTA-TTCCAATGCATTTT--GTTTCTA  47

seq1  ACAATCCTAGCTTATAGTGAATTTATAAGGATAAGTATAACCTTGCTATA  98
      ||||||||||| ||||| ||| ||||||||||||| | |||| |||  ||
seq2  ACAATCCTAGCCTATAGGGAA-TTATAAGGATAAG-AAAACC-TGCATTA  94

seq1  GGTTATAATGTAAATATGGTCCTGGAGGGATGGTTTAGTGGTAAAGAGCA  148
      ||||| ||||||||||||||||| ||||||||||||||||||||||||||
seq2  GGTTAAAATGTAAATATGGTCCT-GAGGGATGGTTTAGTGGTAAAGAGCA  143

seq1  CTGACTGCTCTTCCAGAGGACCTGGCTTCGTTGCCAGTGTTCACACGAAG  198
      |||||||||| |||||||   |||||||||||||||||||||||||||||
seq2  CTGACTGCTC-TCCAGAG--ACTGGCTTCGTTGCCAGTGTTCACACGAAG  190

seq1  GCTCACAACTTTCTAGAGCTCCAGTTTCTAATGCTCTCTTCTGGCTTTCA  248
      ||||||||| ||||||||||||||||||| ||||||||||||||||||||
seq2  GCTCACAAC-TTCTAGAGCTCCAGTTTCT-ATGCTCTCTTCTGGCTTTCA  238

seq1  CGGGACTACATACATATGATGCCCTTACATACCTGCAGACAAAAACACCC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGACTACATACATATGATGCCCTTACATACCTGCAGACAAAAACACCC  288

seq1  ATAGACCCCCTTTAAATAAAGGGGATG-AAAATGTGTTAGAAGGGCAGGA  347
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  ATAGACCCCCTTTAAATAAAGGGGATGAAAAATGTGTTAGAAGGGCAGGA  338

seq1  CTTTACAAGAACGGTATGGTAGGGAAGGAGCTCTCCCGGAACCGCTGAAG  397
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  C-TTACAAGAACGGTATGGTAGGGAAGGAGCTCTCCCGGAACCGCTGAAG  387

seq1  CAGTGCTGGTGTAGGAGGATGCAGCAGAGTGAAGGTCTTCTAATAGAAGC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGCTGGTGTAGGAGGATGCAGCAGAGTGAAGGTCTTCTAATAGAAGC  437

seq1  TGAATCTGCAAGTCGATTATAAAGACAAATGATTCCCAGTTAGTCCTGAG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCTGCAAGTCGATTATAAAGACAAATGATTCCCAGTTAGTCCTGAG  487

seq1  AGCAGCTTAGCACCGACCTCTATCTCACTCTAGGAGTCTCACTGTGGGAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCTTAGCACCGACCTCTATCTCACTCTAGGAGTCTCACTGTGGGAA  537

seq1  TCTCTCCTTACTTTGCATTTAATTAGTGGTGGATGAGAGATATTGCTGCA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCCTTACTTTGCATTTAATTAGTGGTGGATGAGAGATATTGCTGCA  587

seq1  ATTTTGTTATTTGAGAAGGAGACCCAGAATTTAAACCTAAACCATTGAAT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGTTATTTGAGAAGGAGACCCAGAATTTAAACCTAAACCATTGAAT  637

seq1  GACCCCATAAACTTTCAGTTCAGCAAGCTTATCTCTGCAGACAGAGCTTT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCCATAAACTTTCAGTTCAGCAAGCTTATCTCTGCAGACAGAGCTTT  687

seq1  GGCATCCTCAGGAATTTGGCATAGTGACCCCTGTTAAATTTTTTTCTGAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATCCTCAGGAATTTGGCATAGTGACCCCTGTTAAATTTTTTTCTGAA  737

seq1  CTCTTCTTGTTAACTATGATATTTGTGCACAAATAAGGAAACCCACCATT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCTTGTTAACTATGATATTTGTGCACAAATAAGGAAACCCACCATT  787

seq1  TTCTGGAAAACCCTTGGACTGTTACTAACTAATTAGAGATATGTTCTACT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGAAAACCCTTGGACTGTTACTAACTAATTAGAGATATGTTCTACT  837

seq1  TCAGGGAAATATTTCTGAAGGAGGTTCTCTAAATACAAGCTGTTAAGGAT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGAAATATTTCTGAAGGAGGTTCTCTAAATACAAGCTGTTAAGGAT  887

seq1  ATTTATTTTATTAAAATACACAGACAGTAAAGCAAGCAAAATAGCTCAGA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTTTATTAAAATACACAGACAGTAAAGCAAGCAAAATAGCTCAGA  937

seq1  ATTAAATTACAACTGTTTAGTTACAAATTGTGTAAAAGGGAAGTCACAAT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAATTACAACTGTTTAGTTACAAATTGTGTAAAAGGGAAGTCACAAT  987

seq1  GGGTATTTTAAATTGATTTAGACATTTGGACATTTTGGTAAGGAGTAAAA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTATTTTAAATTGATTTAGACATTTGGACATTTTGGTAAGGAGTAAAA  1037

seq1  TGCATTTAAAAGTAAGCTAATTTTGAGGGGTTTTGGGGGGTAGAGTTACT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTTAAAAGTAAGCTAATTTTGAGGGGTTTTGGGGGGTAGAGTTACT  1087

seq1  AATTAGTATTATTTTTGTTATAGATAATTTTAGCAGCTGGAGTGATGGCT  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGTATTATTTTTGTTATAGATAATTTTAGCAGCTGGAGTGATGGCT  1137

seq1  CAACAGTTAAGAATTC  1163
      ||||||||||||||||
seq2  CAACAGTTAAGAATTC  1153