BAC Information

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BAC

Clone NameB6Ng01-148B18
Chromosome3 (Build37)
Map Location 58,352,346 - 58,450,314
singlet/doubletdoublet
Overlap geneEif2a, 2810407C02Rik, 4932431H17Rik
Upstream geneWwtr1, Commd2, Gm410, EG623114, Rnf13, LOC675537, Pfn2, EG433594, LOC100040216, 4921539H07Rik, Tsc22d2, D3Ucla1
Downstream geneLOC666680, LOC100040251, Siah2, LOC100040293, Clrn1, LOC100040416, Gpr171, P2ry14, Gpr87, P2ry13, P2ry12, Igsf10, EG666751, EG666756, EG229330, EG435732
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-148B18.bB6Ng01-148B18.g
ACCDH944806DH944807
length1,110227
definitionDH944806|Mus musculus domesticus DNA, BAC clone: B6Ng01-148B18, 5' end.DH944807|Mus musculus domesticus DNA, BAC clone: B6Ng01-148B18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(58,352,346 - 58,353,451)(58,450,088 - 58,450,314)
sequence
gaattccagttctactgagttttgcgctgtttatggttttatgcctgcga
aagcaacagttttcaacctgaagtgtgatcctgtgtttgactttgggact
ggtcctcgcaacgcagccttctatagccctcatggacatatattagtgct
ggctggatttggaaatcttcgaggacaaatggaagtatgggatgttaaaa
actacaagcttatttctaagccagtggcttctgattctacatattttgcc
tggtgcccagatggtgagcatatcttaacagccacatgtgctcctaggtt
acgtgttaataatgggtataagatctggcattatactggctctcttttgc
ataagtatgatgtgccatcaaatggagaattatggcaggtttcttggcag
ccatttttggatggaatatttccagcaaaaacgataaagtaccaagcagt
tccaagtgaagtgcctagtgaggagcctaaagttgcaacagcttatagac
ctccagccttaagaaataagccagtcaccaattccaaactggtaagtaag
aaataacacagagcaaagtggttctctgtgtggccctctgcagacctttt
tttcctctttgcttgtgttgctccgtacattatgttgcttcgtgcatatg
taggatatactgcagggagatcactaaggcccacagaagatgaagatgct
gagcagcttatataagctgacaaaaaggttaatttaaagaggcttgcagt
ttaaaaaccacaggcttcattattgaattttacaatttgcaatgaaatat
catcatatccaccctctgtttctacatcagattatccttatatccccctc
caactttggtcttttttaaaatactgctctaagtccatttagtacggact
gtacatgcataggtatgaggccatctattagtaaatgggagttctatcaa
tggccatagcctcgaaagccttccctagcaactttcagttgtcagtaact
ctcattaaggctgtggcctaagaaatatccatcaaatcttgttctaaatt
atgttagccttgctcctcatgcaagtaaccccagctactgcgaggttctt
gaggtgcatt
cagaaccatgagacagcggactgactcagcctggcctagtctagtcagcc
aaggaagctgcaatgagaaaaggaaaggtaaactgctataacctggcgag
cacagtgctcacttaccaaccaggggaatgggagtcatctatgtggaagt
ctcagaatggcagcctatgtggatagctttgcactggcgaggcatatatg
tgtgtgtgtgtgtgtgtgtgtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_58352346_58353451
seq2: B6Ng01-148B18.b_45_1154

seq1  GAATTCCAGTTCTACTGAGTTTTGCGCTGTTTATGGTTTTATGCCTGCGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGTTCTACTGAGTTTTGCGCTGTTTATGGTTTTATGCCTGCGA  50

seq1  AAGCAACAGTTTTCAACCTGAAGTGTGATCCTGTGTTTGACTTTGGGACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAACAGTTTTCAACCTGAAGTGTGATCCTGTGTTTGACTTTGGGACT  100

seq1  GGTCCTCGCAACGCAGCCTTCTATAGCCCTCATGGACATATATTAGTGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCTCGCAACGCAGCCTTCTATAGCCCTCATGGACATATATTAGTGCT  150

seq1  GGCTGGATTTGGAAATCTTCGAGGACAAATGGAAGTATGGGATGTTAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGATTTGGAAATCTTCGAGGACAAATGGAAGTATGGGATGTTAAAA  200

seq1  ACTACAAGCTTATTTCTAAGCCAGTGGCTTCTGATTCTACATATTTTGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACAAGCTTATTTCTAAGCCAGTGGCTTCTGATTCTACATATTTTGCC  250

seq1  TGGTGCCCAGATGGTGAGCATATCTTAACAGCCACATGTGCTCCTAGGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGCCCAGATGGTGAGCATATCTTAACAGCCACATGTGCTCCTAGGTT  300

seq1  ACGTGTTAATAATGGGTATAAGATCTGGCATTATACTGGCTCTCTTTTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTGTTAATAATGGGTATAAGATCTGGCATTATACTGGCTCTCTTTTGC  350

seq1  ATAAGTATGATGTGCCATCAAATGGAGAATTATGGCAGGTTTCTTGGCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGTATGATGTGCCATCAAATGGAGAATTATGGCAGGTTTCTTGGCAG  400

seq1  CCATTTTTGGATGGAATATTTCCAGCAAAAACGATAAAGTACCAAGCAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTTTGGATGGAATATTTCCAGCAAAAACGATAAAGTACCAAGCAGT  450

seq1  TCCAAGTGAAGTGCCTAGTGAGGAGCCTAAAGTTGCAACAGCTTATAGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGTGAAGTGCCTAGTGAGGAGCCTAAAGTTGCAACAGCTTATAGAC  500

seq1  CTCCAGCCTTAAGAAATAAGCCAGTCACCAATTCCAAACTGGTAAGTAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGCCTTAAGAAATAAGCCAGTCACCAATTCCAAACTGGTAAGTAAG  550

seq1  AAATAACACAGAGCAAAGTGGTTCTCTGTGTGGCCCTCTGCAGACCTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAACACAGAGCAAAGTGGTTCTCTGTGTGGCCCTCTGCAGACCTTTT  600

seq1  TTTCCTCTTTGCTTGTGTTGCTCCGTACATTATGTTGCTTCGTGCATATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTCTTTGCTTGTGTTGCTCCGTACATTATGTTGCTTCGTGCATATG  650

seq1  TAGGATATACTGCAGGGAGATCACTAAGGCCCACAGAAGATGAAGATGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGATATACTGCAGGGAGATCACTAAGGCCCACAGAAGATGAAGATGCT  700

seq1  GAGCAGCTTATATAAGCTGACAAAAAGGTTAATTTAAAGAGGCTTGCAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGCTTATATAAGCTGACAAAAAGGTTAATTTAAAGAGGCTTGCAGT  750

seq1  TTAAAAACCACAGGCTTCATTATTGAATTTTACAATTTGCAATGAAATAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAACCACAGGCTTCATTATTGAATTTTACAATTTGCAATGAAATAT  800

seq1  CATCATATCCACCCTCTGTTTCTACATCAGATTATCCTTATATCCCCCTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATATCCACCCTCTGTTTCTACATCAGATTATCCTTATATCCCCCTC  850

seq1  CAACTTTGGTCTTTTTAAAAATACTGCTCTAAGTCCATTTAGTACGGACT  900
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CAACTTTGGTCTTTTTTAAAATACTGCTCTAAGTCCATTTAGTACGGACT  900

seq1  GTACATGCATAGGTATGAGGCCATCTATTAGTAAATGGGAGTTCTATCAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACATGCATAGGTATGAGGCCATCTATTAGTAAATGGGAGTTCTATCAA  950

seq1  TGGCCATAGCCTCGAAAGCCTTCCCTAGCAACTTTCAGTTGTCAGTAACT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCATAGCCTCGAAAGCCTTCCCTAGCAACTTTCAGTTGTCAGTAACT  1000

seq1  CTTCAATAAGGGCTGTGGCCTAGAAATTATCCATCAAATCT--GTCTAAA  1048
      | ||| ||| ||||||||||||  || ||||||||||||||   ||||||
seq2  C-TCATTAA-GGCTGTGGCCTAAGAAATATCCATCAAATCTTGTTCTAAA  1048

seq1  TTATGTTAG-CTTGCT-CTCATGCAGGTAACCCCAGCTACTGCGA-GTTC  1095
      ||||||||| |||||| |||||||| ||||||||||||||||||| ||||
seq2  TTATGTTAGCCTTGCTCCTCATGCAAGTAACCCCAGCTACTGCGAGGTTC  1098

seq1  TTGA-GTGCATT  1106
      |||| |||||||
seq2  TTGAGGTGCATT  1110

seq1: chr3_58450088_58450314
seq2: B6Ng01-148B18.g_72_298 (reverse)

seq1  ACACACACACACACACACACACACACACATATATGCCTCGCCAGTGCAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACATATATGCCTCGCCAGTGCAAA  50

seq1  GCTATCCACATAGGCTGCCATTCTGAGACTTCCACATAGATGACTCCCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATCCACATAGGCTGCCATTCTGAGACTTCCACATAGATGACTCCCAT  100

seq1  TCCCCTGGTTGGTAAGTGAGCACTGTGCTCGCCAGGTTATAGCAGTTTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTGGTTGGTAAGTGAGCACTGTGCTCGCCAGGTTATAGCAGTTTAC  150

seq1  CTTTCCTTTTCTCATTGCAGCTTCCTTGGCTGACTAGACTAGGCCAGGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCTTTTCTCATTGCAGCTTCCTTGGCTGACTAGACTAGGCCAGGCT  200

seq1  GAGTCAGTCCGCTGTCTCATGGTTCTG  227
      |||||||||||||||||||||||||||
seq2  GAGTCAGTCCGCTGTCTCATGGTTCTG  227