BAC Information

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BAC

Clone NameB6Ng01-148B23
Chromosome3 (Build37)
Map Location 124,678,770 - 124,758,737
singlet/doubletdoublet
Overlap geneLOC668820
Upstream geneLOC100043333, EG668809, Tram1l1, LOC100043740, 1700006A11Rik, 1700003H04Rik, LOC668817
Downstream geneNdst4, Ugt8a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-148B23.bB6Ng01-148B23.g
ACCDH944816DH944817
length386241
definitionDH944816|Mus musculus domesticus DNA, BAC clone: B6Ng01-148B23, 5' end.DH944817|Mus musculus domesticus DNA, BAC clone: B6Ng01-148B23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(124,678,770 - 124,679,161)(124,758,521 - 124,758,737)
sequence
agcagaaataggaaaataagatacctgttgcttagctttagggcgctccc
atagatttgcagtgattaatcttttcttactaggctatctataaaaaaaa
tgaatatggcatacagaaaatagctgaaaattgtgtttaatatatggcat
tcttgaacaattgaaaataaagtagacaaataacccaatttaatcctaag
gaaatatattttgtgactttttttattaaaatcatgtggaatttttttct
gctgatctaaaactatgggttaaaggtgacttctaagttaggagtgcagt
gcaaactataaatctaacttcattaaaataacagcaaacactattttctt
ttgtgatggtggtggtagtgatgatgatgatggtgg
tcactcatttgtctatacctgtatcgtataggtcatataaaacctgtctc
tctggaaaatctattataatcaccatgagggatgaaacttaatgtttagc
atctagtaaagtgacttttatataatagacactcaaatatccatatacat
acatgtatatgtatatatatatatatatatgtatatatatatatatacat
atatatgtgtgtgtgtggatatttgagtgtgtattatataa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_124678770_124679161
seq2: B6Ng01-148B23.b_44_435

seq1  GAATTCAGCAGAAATAGGAAAATAAGATACCTGTTGCTTAGCTTTAGGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCAGAAATAGGAAAATAAGATACCTGTTGCTTAGCTTTAGGGC  50

seq1  GCTCCCATAGATTTGCAGTGATTAATCTTTTCTTACTAGGCTATCTATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCCATAGATTTGCAGTGATTAATCTTTTCTTACTAGGCTATCTATAA  100

seq1  AAAAAATGAATATGGCATACAGAAAATAGCTGAAAATTGTGTTTAATATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATGAATATGGCATACAGAAAATAGCTGAAAATTGTGTTTAATATA  150

seq1  TGGCATTCTTGAACAATTGAAAATAAAGTAGACAAATAACCCAATTTAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATTCTTGAACAATTGAAAATAAAGTAGACAAATAACCCAATTTAAT  200

seq1  CCTAAGGAAATATATTTTGTGACTTTTTTTATTAAAATCATGTGGAATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAGGAAATATATTTTGTGACTTTTTTTATTAAAATCATGTGGAATTT  250

seq1  TTTTCTGCTGATCTAAAACTATGGGTTAAAGGTGACTTCTAAGTTAGGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTGCTGATCTAAAACTATGGGTTAAAGGTGACTTCTAAGTTAGGAG  300

seq1  TGCAGTGCAAACTATAAATCTAACTTCATTAAAATAACAGCAAACACTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGTGCAAACTATAAATCTAACTTCATTAAAATAACAGCAAACACTAT  350

seq1  TTTCTTTTGTGATGGTGGTGGTAGTGATGATGATGATGGTGG  392
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTGTGATGGTGGTGGTAGTGATGATGATGATGGTGG  392

seq1: chr3_124758521_124758737
seq2: B6Ng01-148B23.g_72_288 (reverse)

seq1  CACACACACACATATATATGTATATATATATATATACATATATATATATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACATATATATGTATATATATATATATACATATATATATATA  50

seq1  TATATACATATACATGTATGTATATGGATATTTGAGTGTCTATTATATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATACATATACATGTATGTATATGGATATTTGAGTGTCTATTATATAA  100

seq1  AAGTCACTTTACTAGATGCTAAACATTAAGTTTCATCCCTCATGGTGATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCACTTTACTAGATGCTAAACATTAAGTTTCATCCCTCATGGTGATT  150

seq1  ATAATAGATTTTCCAGAGAGACAGGTTTTATATGACCTATACGATACAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAGATTTTCCAGAGAGACAGGTTTTATATGACCTATACGATACAGG  200

seq1  TATAGACAAATGAGTGA  217
      |||||||||||||||||
seq2  TATAGACAAATGAGTGA  217