BAC Information

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BAC

Clone NameB6Ng01-148F10
Chromosome3 (Build37)
Map Location 144,846,384 - 145,004,584
singlet/doubletdoublet
Overlap geneCol24a1
Upstream geneLmo4, LOC545572, Hs2st1, Sep15, LOC435761, Sh3glb1, LOC668890, Clca1, Clca2, Clca4, EG622139, AI747448, Clca6, Clca3, Clca5, Odf2l
Downstream gene2410019A14Rik, Cyr61, Ddah1, LOC100040331, Bcl10, 2410004B18Rik, Syde2, Wdr63, Mcoln3, Mcoln2, Edg7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-148F10.bB6Ng01-148F10.g
ACCDH944981DH944982
length1,1051,105
definitionDH944981|Mus musculus domesticus DNA, BAC clone: B6Ng01-148F10, 5' end.DH944982|Mus musculus domesticus DNA, BAC clone: B6Ng01-148F10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(144,846,384 - 144,847,486)(145,003,469 - 145,004,584)
sequence
gaattcaagtaatgttaccaagggtaagcaaaagcagtgaaccctccagt
tccaaaagactggaacaagtgtcttaaaatcaacacacattaatacccag
gaggaggagagacatcaatacccagaaggaagatagctaagagcatcgat
gagctgtaatcagagccacctggtattatccatcccagtgtggcctcgac
tctggcttataccagggagaccagagtgactttagctctgtggataactc
tacatccctcttacagtccagcaaatggcatctgaccttgggtgttggat
aattctggggagacatctctgtggggttctgtcatggtaacacttcccca
taagacatcagaggcgagctgggtgctcttctgtctacactgctcctgac
aatgtcaaatccagccatgttctctccacttccaaatgttcatcttctag
aaggttgcaataaactgatttcttcaactaagaattccaccaaaattgct
ctcatttagggttaggccaagtcaatgtattgttttgttgtttttcaagg
caactccaagcacacgggtttacaagctttagaaacttatttatgcctca
tctaactgttcaaaggtagatattggggtcattcttcacaaagacatcca
aagactgaggttggtggggaatcttggccacctccttcacatggcctttg
tctctgtgtcgaaggacttgctgtggctgttttcaactgccttgtatcca
ccttccaggccacagaatacacgcagcatagaagcaacttcttcacgaga
aacatgaaatagaagctgtggcatctgtttttgagccactagaagcctct
tgcctgtggtccagtggttctcaaccttcctaatcctgcgactcttaaat
atactctttcatgttgtgttggccccaaccataaatagcttgcattgcta
attcatagctgttatcatgctactgttatgagttgtatggtaaatatctg
tgttttcagatgttaggtggtgcctgttaaaggggcatttgaacactaag
gagttggcaaccactgggtgagatccacggcttgcagcctattattcaga
cagcc
gaattcacttggaattgatacactttgtattcttggcttcagatacattt
tgctccaagaaaactgatatagagattcgaaagacatcagagaggaaatc
tgctgcagaatggctgaaaaaaattagtaaaaaaaatatattattttttt
gcatcctctttcactgatgttttaaagattttatctacttacgcagctgt
ttacgtgtatgagtcagaagagggcagcagatctcctaggactagagtta
cagatggttgtgagccaccctgtgggtgctggaactaaaccctagtcctc
tggaaaaacacccagtgctcttagttactgaaccagctgtccacatactc
atcaatattcattcatccattcatctgtttcctcggggtttatgtgtctt
aagcgactcctaaatgaaggaaagttaaaagaagatgtgctgtgctgctc
ttatttaacaccatatgccaacagcggtagaacagtgggtggcattctag
agtccagtgacacggaacccacttccagcttactgcctataaagagagag
cagactgccttttgtctgccaccttctgaggcacacagaagcaccacctc
cagttaaatactgaaacctcagcactcctaaaaatctggagaggtcagga
gaaagaacagacccagggaaaagcaaacggaggatagaatttaaagtccc
tccctcttgttttagttttgttctcctgtcccttttcctgtcccctttga
ccaacaattattcctccctaagactgtttagacagcgcgtattttacctg
tgctttacatctggtaagtggatattattttacatccggagcgatgaaga
tattgtagaagtaatgaatggagatagtttaatggactgtgaatgaacac
tggccttctgagcttttacacaaaaattcttatctacgtgagaccatctc
taaacttttatatataaattattacctattgatatcaactatgtaagtat
ttttattcatgtcctatttcactgagctttacagacactaagttccgtct
cctgttcatctcttttaaaacctgtaaacaaaattattgtcctggtggat
agatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_144846384_144847486
seq2: B6Ng01-148F10.b_43_1147

seq1  GAATTCAAGTAATGTTACCAAGGGTAAGCAAAAGCAGTGAACCCTCCAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGTAATGTTACCAAGGGTAAGCAAAAGCAGTGAACCCTCCAGT  50

seq1  TCCAAAAGACTGGAACAAGTGTCTTAAAATCAACACACATTAATACCCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAAAGACTGGAACAAGTGTCTTAAAATCAACACACATTAATACCCAG  100

seq1  GAGGAGGAGAGACATCAATACCCAGAAGGAAGATAGCTAAGAGCATCGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGGAGAGACATCAATACCCAGAAGGAAGATAGCTAAGAGCATCGAT  150

seq1  GAGCTGTAATCAGAGCCACCTGGTATTATCCATCCCAGTGTGGCCTCGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTGTAATCAGAGCCACCTGGTATTATCCATCCCAGTGTGGCCTCGAC  200

seq1  TCTGGCTTATACCAGGGAGACCAGAGTGACTTTAGCTCTGTGGATAACTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCTTATACCAGGGAGACCAGAGTGACTTTAGCTCTGTGGATAACTC  250

seq1  TACATCCCTCTTACAGTCCAGCAAATGGCATCTGACCTTGGGTGTTGGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATCCCTCTTACAGTCCAGCAAATGGCATCTGACCTTGGGTGTTGGAT  300

seq1  AATTCTGGGGAGACATCTCTGTGGGGTTCTGTCATGGTAACACTTCCCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTGGGGAGACATCTCTGTGGGGTTCTGTCATGGTAACACTTCCCCA  350

seq1  TAAGACATCAGAGGCGAGCTGGGTGCTCTTCTGTCTACACTGCTCCTGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACATCAGAGGCGAGCTGGGTGCTCTTCTGTCTACACTGCTCCTGAC  400

seq1  AATGTCAAATCCAGCCATGTTCTCTCCACTTCCAAATGTTCATCTTCTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCAAATCCAGCCATGTTCTCTCCACTTCCAAATGTTCATCTTCTAG  450

seq1  AAGGTTGCAATAAACTGATTTCTTCAACTAAGAATTCCACCAAAATTGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTGCAATAAACTGATTTCTTCAACTAAGAATTCCACCAAAATTGCT  500

seq1  CTCATTTAGGGTTAGGCCAAGTCAATGTATTGTTTTGTTGTTTTTCAAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTTAGGGTTAGGCCAAGTCAATGTATTGTTTTGTTGTTTTTCAAGG  550

seq1  CAACTCCAAGCACACGGGTTTACAAGCTTTAGAAACTTATTTATGCCTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCCAAGCACACGGGTTTACAAGCTTTAGAAACTTATTTATGCCTCA  600

seq1  TCTAACTGTTCAAAGGTAGATATTGGGGTCATTCTTCACAAAGACATCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAACTGTTCAAAGGTAGATATTGGGGTCATTCTTCACAAAGACATCCA  650

seq1  AAGACTGAGGTTGGTGGGGAATCTTGGCCACCTCCTTCACATGGCCTTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTGAGGTTGGTGGGGAATCTTGGCCACCTCCTTCACATGGCCTTTG  700

seq1  TCTCTGTGTCGAAGGACTTGCTGTGGCTGTTTTCAACTGCCTTGTATCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTGTCGAAGGACTTGCTGTGGCTGTTTTCAACTGCCTTGTATCCA  750

seq1  CCTTCCAGGCCACAGAATACACGCAGCATAGAAGCAACTTCTTCACGAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCAGGCCACAGAATACACGCAGCATAGAAGCAACTTCTTCACGAGA  800

seq1  AACATGAAATAGAAGCTGTGGCATCTGTTTTTGAGCCACTAGAAGCCTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGAAATAGAAGCTGTGGCATCTGTTTTTGAGCCACTAGAAGCCTCT  850

seq1  TGCCTGTGGTCCAGTGGTTCTCAACCTTCCTAATCCTGCGACTCTTAAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGTGGTCCAGTGGTTCTCAACCTTCCTAATCCTGCGACTCTTAAAT  900

seq1  ATACTCTTTCATGTTGTGTTGGCCCCAACCATAAAATAGCTTGCATTGCT  950
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  ATACTCTTTCATGTTGTGTTGGCCCCAACCAT-AAATAGCTTGCATTGCT  949

seq1  AATTCATAGCTGTTATCATGCTACTGTTATGAGTTGTAATGTAAATATCT  1000
      ||||||||||||||||||||||||||||||||||||||  ||||||||||
seq2  AATTCATAGCTGTTATCATGCTACTGTTATGAGTTGTATGGTAAATATCT  999

seq1  GTGTTTTCAGATGTTAGGTGGTGCCTGTTAAAGGGGCATTTG-ACACTAG  1049
      |||||||||||||||||||||||||||||||||||||||||| |||||| 
seq2  GTGTTTTCAGATGTTAGGTGGTGCCTGTTAAAGGGGCATTTGAACACTAA  1049

seq1  GGAGTTGCGACCCACTGGTTGAGAACCACGGC-TGCAGCCTATCA-TCAG  1097
      |||||||  | ||||||| ||||| ||||||| |||||||||| | ||||
seq2  GGAGTTGGCAACCACTGGGTGAGATCCACGGCTTGCAGCCTATTATTCAG  1099

seq1  ACAGCC  1103
      ||||||
seq2  ACAGCC  1105

seq1: chr3_145003469_145004584
seq2: B6Ng01-148F10.g_66_1170 (reverse)

seq1  AATCTATCACACAGGAACAATAATATCTGTTTTACAGGGTTTTTAAAAGA  50
      |||||||| |||  | |||||||| | || ||||||||  ||||||||||
seq2  AATCTATC-CACCAGGACAATAAT-TTTG-TTTACAGG--TTTTAAAAGA  45

seq1  GATTGAACAGGAGACGTGAACTTAGTGTCTGTATAATGCTCAGTG-AATA  99
      || ||||||||||||| ||||||||||||||  ||| |||||||| ||||
seq2  GA-TGAACAGGAGACG-GAACTTAGTGTCTG--TAAAGCTCAGTGAAATA  91

seq1  GGACATGAATAAAATACCTTACATAGTTGATATCAATAGGGTAATAATTT  149
      ||||||||||||||   ||||||||||||||||||||| |||||||||||
seq2  GGACATGAATAAAAATACTTACATAGTTGATATCAATA-GGTAATAATTT  140

seq1  ATATATAAAGTTTTAGAGATGGTTCTCACGTAGATAAGAATTTTTGTTGT  199
      |||||||||  ||||||||||| ||||||||||||||||||||||| |||
seq2  ATATATAAAAGTTTAGAGATGG-TCTCACGTAGATAAGAATTTTTG-TGT  188

seq1  AAAAGCCTCAGAAGGCCAGTGTTCATTCACAGTCCATTAAACTATCTCCA  249
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAG-CTCAGAAGGCCAGTGTTCATTCACAGTCCATTAAACTATCTCCA  237

seq1  TTCATTACTTCTAC-ATATCTTCATCGCTCCGGATGTAAAATAATATCCA  298
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TTCATTACTTCTACAATATCTTCATCGCTCCGGATGTAAAATAATATCCA  287

seq1  CTTACCAGATGTAAAGCACAGGTAAAATACGCGCTGTCTAAACAGTCTTA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACCAGATGTAAAGCACAGGTAAAATACGCGCTGTCTAAACAGTCTTA  337

seq1  GGGAGGAATAATTGTTGGTCAAAGGGGACAGGAAAAGGGACAGGAGAACA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGAATAATTGTTGGTCAAAGGGGACAGGAAAAGGGACAGGAGAACA  387

seq1  AAACTAAAACAAGAGGGAGGGACTTTAAATTCTATCCTCCGTTTGCTTTT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTAAAACAAGAGGGAGGGACTTTAAATTCTATCCTCCGTTTGCTTTT  437

seq1  CCCTGGGTCTGTTCTTTCTCCTGACCTCTCCAGATTTTTAGGAGTGCTGA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGGTCTGTTCTTTCTCCTGACCTCTCCAGATTTTTAGGAGTGCTGA  487

seq1  GGTTTCAGTATTTAACTGGAGGTGGTGCTTCTGTGTGCCTCAGAAGGTGG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTCAGTATTTAACTGGAGGTGGTGCTTCTGTGTGCCTCAGAAGGTGG  537

seq1  CAGACAAAAGGCAGTCTGCTCTCTCTTTATAGGCAGTAAGCTGGAAGTGG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAAAAGGCAGTCTGCTCTCTCTTTATAGGCAGTAAGCTGGAAGTGG  587

seq1  GTTCCGTGTCACTGGACTCTAGAATGCCACCCACTGTTCTACCGCTGTTG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCGTGTCACTGGACTCTAGAATGCCACCCACTGTTCTACCGCTGTTG  637

seq1  GCATATGGTGTTAAATAAGAGCAGCACAGCACATCTTCTTTTAACTTTCC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATGGTGTTAAATAAGAGCAGCACAGCACATCTTCTTTTAACTTTCC  687

seq1  TTCATTTAGGAGTCGCTTAAGACACATAAACCCCGAGGAAACAGATGAAT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTTAGGAGTCGCTTAAGACACATAAACCCCGAGGAAACAGATGAAT  737

seq1  GGATGAATGAATATTGATGAGTATGTGGACAGCTGGTTCAGTAACTAAGA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGAATGAATATTGATGAGTATGTGGACAGCTGGTTCAGTAACTAAGA  787

seq1  GCACTGGGTGTTTTTCCAGAGGACTAGGGTTTAGTTCCAGCACCCACAGG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTGGGTGTTTTTCCAGAGGACTAGGGTTTAGTTCCAGCACCCACAGG  837

seq1  GTGGCTCACAACCATCTGTAACTCTAGTCCTAGGAGATCTGCTGCCCTCT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCTCACAACCATCTGTAACTCTAGTCCTAGGAGATCTGCTGCCCTCT  887

seq1  TCTGACTCATACACGTAAACAGCTGCGTAAGTAGATAAAATCTTTAAAAC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACTCATACACGTAAACAGCTGCGTAAGTAGATAAAATCTTTAAAAC  937

seq1  ATCAGTGAAAGAGGATGCAAAAAAATAATATATTTTTTTTACTAATTTTT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGTGAAAGAGGATGCAAAAAAATAATATATTTTTTTTACTAATTTTT  987

seq1  TTCAGCCATTCTGCAGCAGATTTCCTCTCTGATGTCTTTCGAATCTCTAT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCCATTCTGCAGCAGATTTCCTCTCTGATGTCTTTCGAATCTCTAT  1037

seq1  ATCAGTTTTCTTGGAGCAAAATGTATCTGAAGCCAAGAATACAAAGTGTA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGTTTTCTTGGAGCAAAATGTATCTGAAGCCAAGAATACAAAGTGTA  1087

seq1  TCAATTCCAAGTGAATTC  1116
      ||||||||||||||||||
seq2  TCAATTCCAAGTGAATTC  1105