MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-148G16
Chromosome	3 (Build37)
Map Location	3,255,128 - 3,408,846
singlet/doublet	doublet
Overlap gene	LOC667655
Upstream gene	none
Downstream gene	LOC100039140, Hnf4g, EG383815, LOC100039157, LOC100039167, LOC667709
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC667655 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667655
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC100039140 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039140
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	Hnf4g (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:30942 MGI:1353604
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG383815 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:383815 MGI:3649025
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 72 ESTs, 7 Proteins

name	LOC100039157 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039157
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	LOC100039167 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039167
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC667709 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667709
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 255 ESTs, 11 Proteins pseudo : _no_value

name	Hnf4g (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7305146 GeneID:30942 MGI:1353604
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hepatocyte nuclear factor 4, gamma transcript_id : NM_013920.1

name	EG383815 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94369198 GeneID:383815 MGI:3649025
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 72 ESTs, 7 Proteins product : predicted gene, EG383815 transcript_id : XM_357274.5

name	Hnf4g (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305147 CCDS:CCDS17226.1 GeneID:30942 MGI:1353604
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence ISS] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0004879 - ligand-dependent nuclear receptor activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0005496 - steroid binding [Evidence IEA]; GO:0003707 - steroid hormone receptor activity [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0016563 - transcriptional activator activity [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0006366 - transcription from RNA polymerase II promoter [Evidence IDA] codon_start : 1 function : transcription factor product : hepatocyte nuclear factor 4, gamma protein_id : NP_038948.1

name	EG383815 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38076180 GeneID:383815 MGI:3649025
definition	codon_start : 1 product : hypothetical protein protein_id : XP_357274.1

name	LOC667655 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667655
definition	number : 2 pseudo : _no_value

name	LOC667655 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667655
definition	number : 1 pseudo : _no_value

name	LOC100039140 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039140
definition	number : 1 pseudo : _no_value

name	LOC100039140 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039140
definition	number : 2 pseudo : _no_value

name	LOC100039157 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039157
definition	number : 1 pseudo : _no_value

name	LOC100039167 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039167
definition	number : 1 pseudo : _no_value

name	LOC667709 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149250609 GeneID:667709
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 255 ESTs, 11 Proteins product : similar to Murine homolog of human ftp-3 pseudo : _no_value transcript_id : XR_032506.1

clone name	MSMg01-213F13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-305E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-055G15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-277I22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-344E10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-478H08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-237C18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-467J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-383I05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-180O08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-526G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-353J23
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-209H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-218C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-107M10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-117N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-364P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437I24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-319E19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435H09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-120C12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-262M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-448A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-152K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-357I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-511P16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-426L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-051J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-443E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-386P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-279J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427K07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-106H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-501L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-236L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-481G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-494J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-047C03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344D13
singlet/doublet	doublet
plural/unique	plural

clone name	B6Ng01-152L03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199K18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349C17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254E04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003H10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003H11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130N12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-148G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-293J18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-245H05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-209N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-172H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296J03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095H15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192J16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159O21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030C07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326D13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230K15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-037A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108K07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084K19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-339E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-321L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047L16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124D06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056D01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308J05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147N19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-202M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040O21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-060E04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028F23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179E11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-175E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-179C10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019J01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-195I18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341F14
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-148G16.b	B6Ng01-148G16.g
ACC	DH945034	DH945035
length	1,093	1,139
definition	DH945034\|Mus musculus domesticus DNA, BAC clone: B6Ng01-148G16, 5' end.	DH945035\|Mus musculus domesticus DNA, BAC clone: B6Ng01-148G16, 3' end.
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(3,255,128 - 3,256,213)	(3,407,735 - 3,408,846)
sequence	gaattctcacctgaggaataccgaatggcagagaaactgaaagacccccg aagggagaccctcactcaagcctcgggacagcagcggacccaagaagaca ttgagaccgaacttaaaatgtagtgggcaagatttaataaagtaacagca agaaagcacatagaccagagctctggggtcgaaactcatacacctagtat ggtgtagaggagaatcgaccttgagccaaatttttcacaggcttatatag gaaaaactcaagggggagagcggggcagggaaagtacaagtttgcataac taaggggttctgccaagcgacaaggggttctgccaagggaattctacgta actaaggggtcatgtcctattatttggcaatgtacccggttcattctgag gttgttccaggaggcccttatctcaaaaatgttcttggaacagtctttag ttgggagggttcgaactcttgggtgaggagttcaggaatgcattctgggg tgaagagttcaggagtgttctgggaacaatctctagatgggaggggtcgg gctctggggtgaggaagagttcagtaattttttatctttattcttcattc cccactccttttagaaaatagctctaatcttagagcgagttttcaacctc ttggaggacccgatattgttgccttattaccataacttgtactgcatttt atcctttctctaataaaagctaccaacttattaaggatgcagggaccaaa agtaagcaaaagcataagtgtaattaaaggtcctgctatggtggagagga gagtggtgagccaaggggactttattaaaccagctttcgaaccatccttg ttggctttctctttctcttttacgtatatctaggcgttctctaaagtttg gccatagaatctttgattgctcctgaaggtcaacataaaaacaacattct tcttttagggcagcacagattcctccttcttttagggaaaaaataagtct aatctcttctattctgtagcaccaccttcggacagggaaagttaagattt cttctaatttggttattagactgttctttagtttctaagatca	gaattcttgcctattaagtggcacttaaatccaattacacagcctgaggc tgctaataagatttctattggaccttttcggttatatcattctgctgttt attgctgtgtttcatgggtttcacaactgggtaagacattgattaatttt ttcccttggcagattgaatagcatcttctggcattttaagagctagtgta cagaaaatccttcccgataagttccatgtaaactctttcaaaccttatgt ccaaacagggtgtgtgtgtgattcttcacacaatagagacttgaaatcag attctgagttcaagtgtaccagcaatagtctatattgctttgggagtgtc ttagacttacttccataatcaacaattcaaaaagagatttgtcatgcttg gtgcttaagtttttataggacacagtctggcttttgaagggagcattatc atctctaatagcataaattcatttaaaacacacacacacacacacacaca cacacacacacacacacacaaaattatataatatcctccaagacaaacca ttcaattgcttcactttctctaatgaattatatatttattagaataagct tttctaagactttgttccattaactgtgggaaaatatacacaagaagttg tgtatgcttgtctgctctgagttcatgaatgaaatatccccatccatttt gcagcagtcttccctgatatttctctcttacagtttttctgagcccctct ttctccctgttttctgagactttggatgaagttgttgatactcacatctc atttggagctgaatgttctcacagtagcttattgttagcacttgagtagc tatgagtctctgtgttaaatgttatgtactaaagaaatacatttctctga tgaagggttagaaatgtactgttctatgaatatagagataaattctttag aaggcagttatgctatgtccacttattatgatagtattaggttcgtcttc aaaggcatggtgaacttcagtcacagggtcttgcttagtttttacaggac caaggtattgcatttgcctccgtgtaacaggctttagtaaatcagaatct gtctggttacccttagtgcatgcccttatgtaacatgaa
quality values	Open. 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Alignment Information

BAC End 1

BAC End 2

seq1: chr3_3255128_3256213
seq2: B6Ng01-148G16.b_42_1134

seq1  GAATTCTCACCTGAGGAATACCGAATGGCAGAGAAACTGAAAGACCCCCG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACCTGAGGAATACCGAATGGCAGAGAAACTGAAAGACCCCCG  50

seq1  AAGGGAGACCCTCACTCAAGCCTCGGGACAGCAGCGGACCCAAGAAGACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAGACCCTCACTCAAGCCTCGGGACAGCAGCGGACCCAAGAAGACA  100

seq1  TTGAGACCGAACTTAAAATGTAGTGGGCAAGATTTAATAAAGTAACAGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGACCGAACTTAAAATGTAGTGGGCAAGATTTAATAAAGTAACAGCA  150

seq1  AGAAAGCACATAGACCAGAGCTCTGGGGTCGAAACTCATACACCTAGTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGCACATAGACCAGAGCTCTGGGGTCGAAACTCATACACCTAGTAT  200

seq1  GGTGTAGAGGAGAATCGACCTTGAGCCAAATTTTTCACAGGCTTATATAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTAGAGGAGAATCGACCTTGAGCCAAATTTTTCACAGGCTTATATAG  250

seq1  GAAAAACTCAAGGGGGAGAGCGGGGCAGGGAAAGTACAAGTTTGCATAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAACTCAAGGGGGAGAGCGGGGCAGGGAAAGTACAAGTTTGCATAAC  300

seq1  TAAGGGGTTCTGCCAAGCGACAAGGGGTTCTGCCAAGGGAATTCTACGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGGGTTCTGCCAAGCGACAAGGGGTTCTGCCAAGGGAATTCTACGTA  350

seq1  ACTAAGGGGTCATGTCCTATTATTTGGCAATGTACCCGGTTCATTCTGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAGGGGTCATGTCCTATTATTTGGCAATGTACCCGGTTCATTCTGAG  400

seq1  GTTGTTCCAGGAGGCCCTTATCTCAAAAATGTTCTTGGAACAGTCTTTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTCCAGGAGGCCCTTATCTCAAAAATGTTCTTGGAACAGTCTTTAG  450

seq1  TTGGGAGGGTTCGAACTCTTGGGTGAGGAGTTCAGGAATGCATTCTGGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGAGGGTTCGAACTCTTGGGTGAGGAGTTCAGGAATGCATTCTGGGG  500

seq1  TGAAGAGTTCAGGAGTGTTCTGGGAACAATCTCTAGATGGGAGGGGTCGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAGTTCAGGAGTGTTCTGGGAACAATCTCTAGATGGGAGGGGTCGG  550

seq1  GCTCTGGGGTGAGGAAGAGTTCAGTAATTTTTTATCTTTATTCTTCATTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGGGGTGAGGAAGAGTTCAGTAATTTTTTATCTTTATTCTTCATTC  600

seq1  CCCACTCCTTTTAGAAAATAGCTCTAATCTTAGAGCGAGTTTTCAACCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTCCTTTTAGAAAATAGCTCTAATCTTAGAGCGAGTTTTCAACCTC  650

seq1  TTGGAGGACCCGATATTGTTGCCTTATTACCATAACTTGTACTGCA-TTT  699
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TTGGAGGACCCGATATTGTTGCCTTATTACCATAACTTGTACTGCATTTT  700

seq1  ATCCTTTCTCTAATAAAAGCTACCAACTTATTAAGGATGCAGGGACCAAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTTCTCTAATAAAAGCTACCAACTTATTAAGGATGCAGGGACCAAA  750

seq1  AGTAAGCAAAAGCATAAGTGTAATTAAAGGTCCTGCTATGGTGGAGAGGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGCAAAAGCATAAGTGTAATTAAAGGTCCTGCTATGGTGGAGAGGA  800

seq1  GAGTGGTGAGCCAAGGGGAC-TTATTAAACCAGCTTTCGAACCATCCTTG  848
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GAGTGGTGAGCCAAGGGGACTTTATTAAACCAGCTTTCGAACCATCCTTG  850

seq1  TTGGCTTTCTCTTTCTCTTTTACGTATATCTAGGCGTTCTCT-AAGTTTG  897
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TTGGCTTTCTCTTTCTCTTTTACGTATATCTAGGCGTTCTCTAAAGTTTG  900

seq1  GCCATAGAATCTTTGATTGCTCCTGAATGGTCAACATAAAAACAACATTC  947
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GCCATAGAATCTTTGATTGCTCCTGAA-GGTCAACATAAAAACAACATTC  949

seq1  TTCTTTTAGGGCAGCACAGAGTCCTCCTTCTTTAAGG--AATAATAAGTC  995
      |||||||||||||||||||| |||||||||||| |||  || ||||||||
seq2  TTCTTTTAGGGCAGCACAGATTCCTCCTTCTTTTAGGGAAAAAATAAGTC  999

seq1  TAATCCTCTTCTATTCTGTAGCACCA-CTTCGGACAGGG-AAGTTAAAGA  1043
      |||| ||||||||||||||||||||| |||||||||||| |||||||   
seq2  TAAT-CTCTTCTATTCTGTAGCACCACCTTCGGACAGGGAAAGTTAAGAT  1048

seq1  TTCTTCTAATTTGGTTA-TAGACTGTTCTATAG-TTCTAAGATCA  1086
      ||||||||||||||||| ||||||||||| ||| |||||||||||
seq2  TTCTTCTAATTTGGTTATTAGACTGTTCTTTAGTTTCTAAGATCA  1093

seq1: chr3_3407735_3408846
seq2: B6Ng01-148G16.g_91_1207 (reverse)

seq1  TTCATGGTTACATTAGTGGCATGCA-TAAGGATAA-CAGACAGATTTCTG  48
      ||||| ||||||| || |||||||| ||||| ||| |||||||| |||||
seq2  TTCAT-GTTACATAAG-GGCATGCACTAAGGGTAACCAGACAGA-TTCTG  47

seq1  ATTTTACTTAAGGCTGTTTCCACGGGAGCAAATGC-ATACC-TGGTACTG  96
      | |||||| ||| ||| || |||||  |||||||| ||||| |||| |||
seq2  A-TTTACTAAAGCCTG-TTACACGGAGGCAAATGCAATACCTTGGTCCTG  95

seq1  T-AAAACTGAGCAAGAACCTGTGACTG-AGGTCA-CATGCC-TTGGAGAC  142
      | |||||| ||||||| |||||||||| || ||| |||||| ||| ||||
seq2  TAAAAACTAAGCAAGACCCTGTGACTGAAGTTCACCATGCCTTTGAAGAC  145

seq1  GAACCTAATACTATCATTATTAAGTGGACATAGCATAACTGCCTTCTAAA  192
      |||||||||||||||| || ||||||||||||||||||||||||||||||
seq2  GAACCTAATACTATCA-TAATAAGTGGACATAGCATAACTGCCTTCTAAA  194

seq1  G-ATTTATCTCTATATTCATAGAACAGTACATTTCTTACCCTTCATCAGA  241
      | |||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GAATTTATCTCTATATTCATAGAACAGTACATTTCTAACCCTTCATCAGA  244

seq1  GAAATGTATTTCTTTAGTACATAACATTTAACACAGAGACTCATAGCTAC  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGTATTTCTTTAGTACATAACATTTAACACAGAGACTCATAGCTAC  294

seq1  TCAAAGTGCTAACAATAAGCTACTGTGAG-ACATTCAGCTCCAAATGAGA  340
      || |||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TC-AAGTGCTAACAATAAGCTACTGTGAGAACATTCAGCTCCAAATGAGA  343

seq1  TGTGAGTATCAACAACTTCATCC-AAGTCTCAGAAAACAGGGAGAAAGAG  389
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TGTGAGTATCAACAACTTCATCCAAAGTCTCAGAAAACAGGGAGAAAGAG  393

seq1  GGGCTCAGAAAAACTGTAAGAGAGAAATATCAGGGAAGACTGCTGCAAAA  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTCAGAAAAACTGTAAGAGAGAAATATCAGGGAAGACTGCTGCAAAA  443

seq1  TGGATGGGGATATTTCATTCATGAACTCAGAGCAGACAAGCATACACAAC  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGGGGATATTTCATTCATGAACTCAGAGCAGACAAGCATACACAAC  493

seq1  TTCTTGTGTATATTTTCCCACAGTTAATGGAACAAAGTCTTAG-AAAGCT  538
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TTCTTGTGTATATTTTCCCACAGTTAATGGAACAAAGTCTTAGAAAAGCT  543

seq1  TATTCTAATAAATATATAATTCATTAGAGAAAGTGAAGCAATTGAATGGT  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTAATAAATATATAATTCATTAGAGAAAGTGAAGCAATTGAATGGT  593

seq1  TTGTCTTGGAGGATATTATATAATTTTGTGTGTGTGTGTGTGTGTGTGTG  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTTGGAGGATATTATATAATTTTGTGTGTGTGTGTGTGTGTGTGTG  643

seq1  TGTGTGTGTGTGTGTGTGTTTTAAATGAATTTATGCTATTAGAGATGATA  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTTTTAAATGAATTTATGCTATTAGAGATGATA  693

seq1  ATGCTCCCTTCAAAAGCCAGACTGTGTCCTATAAAAACTTAAGCACCAAG  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTCCCTTCAAAAGCCAGACTGTGTCCTATAAAAACTTAAGCACCAAG  743

seq1  CATGACAAATCTCTTTTTGAATTGTTGATTATGGAAGTAAGTCTAAGACA  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGACAAATCTCTTTTTGAATTGTTGATTATGGAAGTAAGTCTAAGACA  793

seq1  CTCCCAAAGCAATATAGACTATTGCTGGTACACTTGAACTCAGAATCTGA  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCAAAGCAATATAGACTATTGCTGGTACACTTGAACTCAGAATCTGA  843

seq1  TTTCAAGTCTCTATTGTGTGAAGAATCACACACACACCCTGTTTGGACAT  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAGTCTCTATTGTGTGAAGAATCACACACACACCCTGTTTGGACAT  893

seq1  AAGGTTTGAAAGAGTTTACATGGAACTTATCGGGAAGGATTTTCTGTACA  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTTGAAAGAGTTTACATGGAACTTATCGGGAAGGATTTTCTGTACA  943

seq1  CTAGCTCTTAAAATGCCAGAAGATGCTATTCAATCTGCCAAGGGAAAAAA  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCTCTTAAAATGCCAGAAGATGCTATTCAATCTGCCAAGGGAAAAAA  993

seq1  TTAATCAATGTCTTACCCAGTTGTGAAACCCATGAAACACAGCAATAAAC  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATCAATGTCTTACCCAGTTGTGAAACCCATGAAACACAGCAATAAAC  1043

seq1  AGCAGAATGATATAACCGAAAAGGTCCAATAGAAATCTTATTAGCAGCCT  1088
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAATGATATAACCGAAAAGGTCCAATAGAAATCTTATTAGCAGCCT  1093

seq1  CAGGCTGTGTAATTGGATTTAAGT  1112
      ||||||||||||||||||||||||
seq2  CAGGCTGTGTAATTGGATTTAAGT  1117

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information