BAC Information

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BAC

Clone NameB6Ng01-148K04
Chromosome3 (Build37)
Map Location 114,066,515 - 114,067,631
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043684, LOC100043686, LOC100043688, LOC100043207, Amy1, Rnpc3, Col11a1
Downstream geneLOC100043220, Olfm3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-148K04.bB6Ng01-148K04.g
ACCDH945185DH945186
length1,1171,062
definitionDH945185|Mus musculus domesticus DNA, BAC clone: B6Ng01-148K04, 5' end.DH945186|Mus musculus domesticus DNA, BAC clone: B6Ng01-148K04, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaggaaacttgtaattttacttcttttctatgagcatgcatgaat
ataaatatttttatgaattatttgtgttggcacctgttaattttcccttc
ttcaatttaatttgcagaccccttaatatcacttctaggagaaatgagaa
aaaaacacattttcttcataatgttataaagctagagataattcaaactg
attgtgggactcaggtgagataagtgtattcataaactctcacaaaatgt
gtatattaatttttttaagaataaaagaaagtctcagaagattttcagac
ttagaacaacctaacaagtgccttcagtgtgacccgatgcaaattaaaga
actgttctaagtcttgtcaagttcacacaatatcagcatcatgatacaca
cagaaggtttttctgaaattatagatgagtttaattggcaagtgcagtat
aaagaaaatgagaggaaaatgagatccgaggaattagctctagttctcca
cctaactgaatctgagctgcctctgttttctcctcttatggtgtctttta
tcatagtgtatgatggggtcagtaattcaaaaagctttgtgtttcaacta
agcacccgatctataaatattactctcattagtcattaaatgtcactaat
gataaaagtttactctcatgtattaatattaaaatctatacttactgttg
cttaatgaagttattaaatataatgtcatttaagcctgtgtataagctat
tttgaaatgacatctacttagtttatacctggtttgcaataccaaagagg
aaaaaatgcatctacttttagttattggcagttctttcacaagccggaac
aggaaaaagaaaagaatagattacagttaggaagatatcatgttaacacc
tcctggcatttggctcatacaagaatggtattaagaatgtgtgtttcaag
agctataataaatgtgtgatccagacattttattctattttatttgctta
tttgctgtgaaagcataccccccaaccccaaacataccaaccacatttct
tatgccattaaagatcaattttcccttaacaccatcctctttttccctcc
ctccctacaatcccccc
gaattcctgatctctccaatacttaacatgaagggctgttgtattttgtc
aaatgctttttctgcatgtaaggagatgaccatgtgatttttttctttca
gtttgtttatatagtgaattaggttaatgaattttcatgtattaaaacaa
ccttgcatccctggtatgaagcctacttgatcatggtgaatgatggtttt
aatgtgttcttagattcagtttacaagaattttattgagtatttttgcat
caatatttgtaagtgagtttggtctgaagttctcttttttggttgggtcc
tagtatgctttaggtatcagagtaattgtggcttcatagaatgagttagg
tagcattccttatgtttctattttatggaatagtttgaagaaaattggta
tcagatcttctttgatagtctggtagaatcttgttgattctctcaaagaa
ccagcttctggttttgttgattctttgaattgtttgtttgtttgctttgt
attttttgatttttgttttgtttctatttggtttattttgtccctgagtt
tgaatatttcctgccttctattcctcttgggtgagtttgcctctttttgt
tctagagctctcaggtgtgctgttaagtttgttagtgtaaaatctctaca
gtttctttaccaggactcttagtgctatgaactttcctcttagcattgct
ttcattgtgtcccataagtttgggtatgaagtgtcaatattttcattaaa
ttccaggaagtatttaatttctttttttaaattttttttccctgacaagt
tgtcattgactacagaaattgttaagtttcctcatgtatgtggggatttc
tgagtttttttgctaattttgttgaccagccttaggccatggtgatctga
taggatgcatgggtatattcaattttcttgtatctgttaaggattgtttt
gtggccattatatggtttgattttggaagaaggttgatgaaggggcagaa
taagcgttctccttgtttaaggaaaatgttctgtggtatctggataatcc
atttgggtcaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_114066515_114067631
seq2: B6Ng01-148K04.b_46_1162 (reverse)

seq1  GGGGGGATTGTAGGGAGGGAGGGAAAAAGA-GAT-GTGTTAAGGGAAAAT  48
      |||||||||||||||||||||||||||||| ||| |||||||||||||||
seq2  GGGGGGATTGTAGGGAGGGAGGGAAAAAGAGGATGGTGTTAAGGGAAAAT  50

seq1  GAATTCTTTATGGCAATAAG-AATGT-GTTTGTATGTTTGTGTGTGGGGG  96
        ||  || ||||| ||||| ||||| ||| ||||||||| |  ||||||
seq2  TGATCTTTAATGGC-ATAAGAAATGTGGTTGGTATGTTTGGGGTTGGGGG  99

seq1  GTATGCCTTTCACAGCAAATAAGCAAATAAAATAGAATAAAATGTCTGGA  146
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATG-CTTTCACAGCAAATAAGCAAATAAAATAGAATAAAATGTCTGGA  148

seq1  TCAACACATTTAATAATAGCTCTTGAAACACACATTCTT-ATACCATTCT  195
      || |||||||| || |||||||||||||||||||||||| ||||||||||
seq2  TC-ACACATTT-ATTATAGCTCTTGAAACACACATTCTTAATACCATTCT  196

seq1  TGTATGAGCCAAATGCCAGGAGGTGGTTAACATGATATCTTCCTAACTGT  245
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TGTATGAGCCAAATGCCAGGAGGT-GTTAACATGATATCTTCCTAACTGT  245

seq1  AATCTATTCTTTTCTTTTTCCTGTTCCGGCTTGTGAAAGAACTGCCAATA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTATTCTTTTCTTTTTCCTGTTCCGGCTTGTGAAAGAACTGCCAATA  295

seq1  ACTAAAAGTAGATGCATTTTTTCCTCTTTGGTATTGCAAACCAGGTATAA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAAAGTAGATGCATTTTTTCCTCTTTGGTATTGCAAACCAGGTATAA  345

seq1  ACTAAGTAGATGTCATTTCAAAATAGCTTATACACAGGCTTAAATGACAT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAGTAGATGTCATTTCAAAATAGCTTATACACAGGCTTAAATGACAT  395

seq1  TATATTTAATAACTTCATTAAGCAACAGTAAGTATAGATTTTAATATTAA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTAATAACTTCATTAAGCAACAGTAAGTATAGATTTTAATATTAA  445

seq1  TACATGAGAGTAAACTTTTATCATTAGTGACATTTAATGACTAATGAGAG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGAGAGTAAACTTTTATCATTAGTGACATTTAATGACTAATGAGAG  495

seq1  TAATATTTATAGATCGGGTGCTTAGTTGAAACACAAAGCTTTTTGAATTA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATTTATAGATCGGGTGCTTAGTTGAAACACAAAGCTTTTTGAATTA  545

seq1  CTGACCCCATCATACACTATGATAAAAGACACCATAAGAGGAGAAAACAG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCCCATCATACACTATGATAAAAGACACCATAAGAGGAGAAAACAG  595

seq1  AGGCAGCTCAGATTCAGTTAGGTGGAGAACTAGAGCTAATTCCTCGGATC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGCTCAGATTCAGTTAGGTGGAGAACTAGAGCTAATTCCTCGGATC  645

seq1  TCATTTTCCTCTCATTTTCTTTATACTGCACTTGCCAATTAAACTCATCT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTCCTCTCATTTTCTTTATACTGCACTTGCCAATTAAACTCATCT  695

seq1  ATAATTTCAGAAAAACCTTCTGTGTGTATCATGATGCTGATATTGTGTGA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTTCAGAAAAACCTTCTGTGTGTATCATGATGCTGATATTGTGTGA  745

seq1  ACTTGACAAGACTTAGAACAGTTCTTTAATTTGCATCGGGTCACACTGAA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGACAAGACTTAGAACAGTTCTTTAATTTGCATCGGGTCACACTGAA  795

seq1  GGCACTTGTTAGGTTGTTCTAAGTCTGAAAATCTTCTGAGACTTTCTTTT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACTTGTTAGGTTGTTCTAAGTCTGAAAATCTTCTGAGACTTTCTTTT  845

seq1  ATTCTTAAAAAAATTAATATACACATTTTGTGAGAGTTTATGAATACACT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTAAAAAAATTAATATACACATTTTGTGAGAGTTTATGAATACACT  895

seq1  TATCTCACCTGAGTCCCACAATCAGTTTGAATTATCTCTAGCTTTATAAC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCACCTGAGTCCCACAATCAGTTTGAATTATCTCTAGCTTTATAAC  945

seq1  ATTATGAAGAAAATGTGTTTTTTTCTCATTTCTCCTAGAAGTGATATTAA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGAAGAAAATGTGTTTTTTTCTCATTTCTCCTAGAAGTGATATTAA  995

seq1  GGGGTCTGCAAATTAAATTGAAGAAGGGAAAATTAACAGGTGCCAACACA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTCTGCAAATTAAATTGAAGAAGGGAAAATTAACAGGTGCCAACACA  1045

seq1  AATAATTCATAAAAATATTTATATTCATGCATGCTCATAGAAAAGAAGTA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATTCATAAAAATATTTATATTCATGCATGCTCATAGAAAAGAAGTA  1095

seq1  AAATTACAAGTTTCCTGAATTC  1117
      ||||||||||||||||||||||
seq2  AAATTACAAGTTTCCTGAATTC  1117