BAC Information

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BAC

Clone NameB6Ng01-148M03
Chromosome3 (Build37)
Map Location 155,186,575 - 155,187,732
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040829, Tyw3, Cryz, BC007180, Tnni3k, Fpgt, Lrrc44, EG383956, Scp2-ps1
Downstream geneEG668902, LOC624519, LOC100040901
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-148M03.bB6Ng01-148M03.g
ACCDH945277DH945278
length1,1501,057
definitionDH945277|Mus musculus domesticus DNA, BAC clone: B6Ng01-148M03, 5' end.DH945278|Mus musculus domesticus DNA, BAC clone: B6Ng01-148M03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttatatatattggatattactcccttatctgatttaggatagg
caaacatcctttcccaatctgttggtggcctttttgtcttattgggggtg
tcttttgccttgcagaagctttgcagtttcatgaggtcccatttgtcaat
tctcgatcttacagcacaagctattgctgtttaatccagccacaatacta
ttttttcttattaagagttgacagagtcatggaatctcttcacaacgata
aaactcttatgaagacataatctatctggtgctttttatagaagattagt
attaacaataacaaaaatacctcaagtaccaattaaaggtcaaaatgcaa
acttttattgtatcaagcaaaatttgaaaagtctataatagtaagccaaa
ggaggccctggccccacaagcattgtgggatacatacagacaatagttca
cctaaggatgaatacaacctttagagcacaaattttcacaccacctccag
aattagcacttaaaatatttgattgaaaataatctcattaacatgtcttt
cttgtcactgtgctactacataatgaaacatagaaacatttctactgatt
ttatttaaaaatgtaaaggacttgggatagtgccttttagacttcctgcc
tgccaaacatctataaacgtgtgaccattttcttcatagtacataaaaat
taagtcatgttcatgaaataaccaccatgaaatagaacacctgatgcatg
ttttctagcatccaaagagatgatatttctactagtttaccatttaattc
atttgatcagatttttgacactagaattgatagatccccccccccagaga
ttaaaaaatattaacaaaataactattattttggggaaaatcaggcatac
agtttgtatcattagtcagtgctataggcattgcatttttaaatatataa
tgaacttctaaatttccaatccttaatgatgtaacaaagatgagaattat
tccacattaatttttagagcttttgcctttccttctttttctggtcagag
ctctggtcttttattgagtcagcttctgaccaaaagggcacaattgtaac
caagatgagcatcttgactttcgacacttagccgactgacagggtttcat

gaattctttgtttagctctgtaccccattcttaatagggttgtttggttc
tctggactctaacttcttgacttctttgtatatattggatataagctcac
tataggatataggcttggtaaagatcttttcccaatctgttggttgccat
tttgtccaattgacagtgttctttgccttacagaagttttgcaacttaga
ggtcccattttagagcataaaccattggtgttctgatcaggaaaaatttc
cccatgctcatgtgtttgaggctcttccccactttctcttttatttgatt
ctgcgtatctggttttatgtggaggtctttgatccacttggacttgagct
ttgtatagggagattaaaatggatcaatttccattcttctacatgctgac
tacaagttgaaccagcactatttgttgaaaatgctgtcttttttccactg
gatgattttagatcctttgtcagtggtcaagtgaccataggtatgttggt
taatttctggatcttcaagtctattccactgatctacctgcctgtctgtg
taccaataccatggattttttattactattgctctgtaatatagtttgag
gtcaggtgtggtgattccctcagaagttctttcctgggatttttgttatt
ccaaatgaatttgcaaatttccctttttacctctatgaagaattgaattg
taattttgattggaattgcactgaatctgcagaatgctttctacaagatg
gctatttttactatataaatcctgccactccatgagcatgggagattttt
ccatcatctgagatcttctttgagattgaagttattgtcatacagatcat
tcacttgcttggttagcatctcgtcaagtattttattttattttgactat
tgtgaagggtgttgtttccctaatttctttctcagcctatttattctttg
tgtaaagaaggttactgatttgtttgaataattttatttctagccacttt
gctgagttgttatcagttgtaaggagttccctcggtggaatttttggggg
ccctaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_155186575_155187732
seq2: B6Ng01-148M03.b_46_1195 (reverse)

seq1  ATGAAACCCTTGGTCATGTCTGCTAAGTTGTCTGAAAGTC-AGATGCTCA  49
      ||||||||||  |||| ||| |||||| |||| ||||||| |||||||||
seq2  ATGAAACCCT--GTCA-GTCGGCTAAG-TGTC-GAAAGTCAAGATGCTCA  45

seq1  TCTTTGTTTACATTTTGGTTGCTCCTTTTGGTCAGAAGCTGACTCAATAA  99
      || ||| ||||| ||    ||| |||||||||||||||||||||||||||
seq2  TC-TTGGTTACAATT---GTGC-CCTTTTGGTCAGAAGCTGACTCAATAA  90

seq1  AAGA-CAGAGCTCTGA-CAG-AAAAGAAGGAAAGGCATAAGCTCTAAAAA  146
      |||| ||||||||||| ||| |||||||||||||||| ||||||||||||
seq2  AAGACCAGAGCTCTGACCAGAAAAAGAAGGAAAGGCAAAAGCTCTAAAAA  140

seq1  -TAATGT-GATTAATTCTCAATTCTTTGTTACATCATTAAGGATTGGAAA  194
       |||||| || |||||||||  ||||||||||||||||||||||||||||
seq2  TTAATGTGGAATAATTCTCA--TCTTTGTTACATCATTAAGGATTGGAAA  188

seq1  TTTAGAAGTTCATTATATATTTAAAAAATGCAATGCCTATAGCACTGACT  244
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TTTAGAAGTTCATTATATATTT-AAAAATGCAATGCCTATAGCACTGACT  237

seq1  AATGATACAAACTGTATGCCTGATTTTTCCCCAAAATAATAGTTATTTTG  294
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  AATGATACAAACTGTATGCCTGA-TTTTCCCCAAAATAATAGTTATTTTG  286

seq1  TTAATATTTTTTAATCTCTGGGGGGGGGGATCTATCAATTCTAGTGTCAA  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATATTTTTTAATCTCTGGGGGGGGGGATCTATCAATTCTAGTGTCAA  336

seq1  AAATCTGATCAAATGAATTAAATGGTAAACTAGTAGAAATATCATCTCTT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTGATCAAATGAATTAAATGGTAAACTAGTAGAAATATCATCTCTT  386

seq1  TGGATGCTAGAAAACATGCATCAGGTGTTCTATTTCATGGTGGTTATTTC  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGCTAGAAAACATGCATCAGGTGTTCTATTTCATGGTGGTTATTTC  436

seq1  ATGAACATGACTTAATTTTTATGTACTATGAAGAAAATGGTCACACGTTT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACATGACTTAATTTTTATGTACTATGAAGAAAATGGTCACACGTTT  486

seq1  ATAGATGTTTGGCAGGCAGGAAGTCTAAAAGGCACTATCCCAAGTCCTTT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATGTTTGGCAGGCAGGAAGTCTAAAAGGCACTATCCCAAGTCCTTT  536

seq1  ACATTTTTAAATAAAATCAGTAGAAATGTTTCTATGTTTCATTATGTAGT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTTAAATAAAATCAGTAGAAATGTTTCTATGTTTCATTATGTAGT  586

seq1  AGCACAGTGACAAGAAAGACATGTTAATGAGATTATTTTCAATCAAATAT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACAGTGACAAGAAAGACATGTTAATGAGATTATTTTCAATCAAATAT  636

seq1  TTTAAGTGCTAATTCTGGAGGTGGTGTGAAAATTTGTGCTCTAAAGGTTG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGTGCTAATTCTGGAGGTGGTGTGAAAATTTGTGCTCTAAAGGTTG  686

seq1  TATTCATCCTTAGGTGAACTATTGTCTGTATGTATCCCACAATGCTTGTG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCATCCTTAGGTGAACTATTGTCTGTATGTATCCCACAATGCTTGTG  736

seq1  GGGCCAGGGCCTCCTTTGGCTTACTATTATAGACTTTTCAAATTTTGCTT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCAGGGCCTCCTTTGGCTTACTATTATAGACTTTTCAAATTTTGCTT  786

seq1  GATACAATAAAAGTTTGCATTTTGACCTTTAATTGGTACTTGAGGTATTT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACAATAAAAGTTTGCATTTTGACCTTTAATTGGTACTTGAGGTATTT  836

seq1  TTGTTATTGTTAATACTAATCTTCTATAAAAAGCACCAGATAGATTATGT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTATTGTTAATACTAATCTTCTATAAAAAGCACCAGATAGATTATGT  886

seq1  CTTCATAAGAGTTTTATCGTTGTGAAGAGATTCCATGACTCTGTCAACTC  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATAAGAGTTTTATCGTTGTGAAGAGATTCCATGACTCTGTCAACTC  936

seq1  TTAATAAGAAAAAATAGTATTGTGGCTGGATTAAACAGCAATAGCTTGTG  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATAAGAAAAAATAGTATTGTGGCTGGATTAAACAGCAATAGCTTGTG  986

seq1  CTGTAAGATCGAGAATTGACAAATGGGACCTCATGAAACTGCAAAGCTTC  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAAGATCGAGAATTGACAAATGGGACCTCATGAAACTGCAAAGCTTC  1036

seq1  TGCAAGGCAAAAGACACCCCCAATAAGACAAAAAGGCCACCAACAGATTG  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAGGCAAAAGACACCCCCAATAAGACAAAAAGGCCACCAACAGATTG  1086

seq1  GGAAAGGATGTTTGCCTATCCTAAATCAGATAAGGGAGTAATATCCAATA  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGGATGTTTGCCTATCCTAAATCAGATAAGGGAGTAATATCCAATA  1136

seq1  TATATAAAGAATTC  1158
      ||||||||||||||
seq2  TATATAAAGAATTC  1150