BAC Information

Click to search

BAC

Clone NameB6Ng01-148M08
Chromosome3 (Build37)13 (Build37)
Map Location 150,038,671 - 150,038,77626,845,886 - 26,846,469
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100040620, LOC100040633
Downstream geneLOC100040455, LOC100040463, LOC623554
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-148M08.bB6Ng01-148M08.g
ACCDH945287DH945288
length314584
definitionDH945287|Mus musculus domesticus DNA, BAC clone: B6Ng01-148M08, 5' end.DH945288|Mus musculus domesticus DNA, BAC clone: B6Ng01-148M08, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(150,038,671 - 150,038,776)(26,845,886 - 26,846,469)
sequence
agaactgaggaatgtcaaatggctgagaagcacctaaagaaatgttcaaa
ttccttagtgatcagagaaattcaaatcaaaacaaccatgagattccact
ttacaccagtcagaatggctaagatcaaaatatcaggtgacaacaaatgt
tagaaaggatgtggagtactggttagttcataatgttgttccacctatag
ggttgcagatccctttagctccatcactggaaagagaggcccattggaca
cgcaaactgtagatgccccagtacaggggaacgccagggccaaaaaaaaa
tgggaatgaatggg
gaattcctaagtgctgcttccctgttggctgacattgcatttatgtttta
agatcagaactttgaataacactataatttcccaggaatgagagacccac
aagtgttgcacggctagctctatatgcaaccctagagcagcctctatcac
tgtctgttgagtcatatttataccctccaaatatcacaggtccttcactg
acatcactctgccaaccagcccaagtctgcagaagcaacaaaaaactgca
gcacaccaccataagttttttgatgtgtttctttctgtggagttctgaac
aatgaagctcaactatgcaatgtaaggcagaacaatgcctgttgttagca
acgaatcctccattacatgtcctttcatttgatagctttagcaaaacatc
ctttcacttgcatctgcttcagctaaatttcccttcacgtgtttgcccca
gcaagatccaccaactttccgaagaaccctcaagtttccacttcactgtt
ataaatgcgtgaagacttagtagacataattcactgtggattttctgtaa
tattaatgacatagggagggggagagggagggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_150038671_150038776
seq2: B6Ng01-148M08.b_273_366 (reverse)

seq1  CCCACTCATTCCCATTTTTTTTTTTTTTTTTTTTTGGCCCTGGCGTTCCC  50
      |||| |||||||||            ||||||||||||||||||||||||
seq2  CCCATTCATTCCCA------------TTTTTTTTTGGCCCTGGCGTTCCC  38

seq1  CTGTACTGGGGCATATACAGTTTGCATGTCCAATGGGCCTCTCTTTCTAG  100
      |||||||||||||| |||||||||| ||||||||||||||||||||| ||
seq2  CTGTACTGGGGCATCTACAGTTTGCGTGTCCAATGGGCCTCTCTTTCCAG  88

seq1  TGATGG  106
      ||||||
seq2  TGATGG  94

seq1: chr13_26845886_26846469
seq2: B6Ng01-148M08.g_70_653 (reverse)

seq1  CTCCCTCCCTCTCCCCCTCCCTATGTCATTAATATTACAGAAAATCCACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTCCCTCTCCCCCTCCCTATGTCATTAATATTACAGAAAATCCACA  50

seq1  GTGAATTATGTCTACTAAGTCTTCACGCATTTATAACAGTGAAGTGGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATTATGTCTACTAAGTCTTCACGCATTTATAACAGTGAAGTGGAAA  100

seq1  CTTGAGGGTTCTTCGGAAAGTTGGTGGATCTTGCTGGGGCAAACACGTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGGGTTCTTCGGAAAGTTGGTGGATCTTGCTGGGGCAAACACGTGA  150

seq1  AGGGAAATTTAGCTGAAGCAGATGCAAGTGAAAGGATGTTTTGCTAAAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAAATTTAGCTGAAGCAGATGCAAGTGAAAGGATGTTTTGCTAAAGC  200

seq1  TATCAAATGAAAGGACATGTAATGGAGGATTCGTTGCTAACAACAGGCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAAATGAAAGGACATGTAATGGAGGATTCGTTGCTAACAACAGGCAT  250

seq1  TGTTCTGCCTTACATTGCATAGTTGAGCTTCATTGTTCAGAACTCCACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTGCCTTACATTGCATAGTTGAGCTTCATTGTTCAGAACTCCACAG  300

seq1  AAAGAAACACATCAAAAAACTTATGGTGGTGTGCTGCAGTTTTTTGTTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAACACATCAAAAAACTTATGGTGGTGTGCTGCAGTTTTTTGTTGC  350

seq1  TTCTGCAGACTTGGGCTGGTTGGCAGAGTGATGTCAGTGAAGGACCTGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCAGACTTGGGCTGGTTGGCAGAGTGATGTCAGTGAAGGACCTGTG  400

seq1  ATATTTGGAGGGTATAAATATGACTCAACAGACAGTGATAGAGGCTGCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTGGAGGGTATAAATATGACTCAACAGACAGTGATAGAGGCTGCTC  450

seq1  TAGGGTTGCATATAGAGCTAGCCGTGCAACACTTGTGGGTCTCTCATTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGTTGCATATAGAGCTAGCCGTGCAACACTTGTGGGTCTCTCATTCC  500

seq1  TGGGAAATTATAGTGTTATTCAAAGTTCTGATCTTAAAACATAAATGCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAATTATAGTGTTATTCAAAGTTCTGATCTTAAAACATAAATGCAA  550

seq1  TGTCAGCCAACAGGGAAGCAGCACTTAGGAATTC  584
      ||||||||||||||||||||||||||||||||||
seq2  TGTCAGCCAACAGGGAAGCAGCACTTAGGAATTC  584