BAC Information

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BAC

Clone NameB6Ng01-148P16
Chromosome3 (Build37)
Map Location 59,207,147 - 59,207,819
singlet/doubletsinglet
Overlap genenone
Upstream geneTsc22d2, D3Ucla1, Eif2a, 2810407C02Rik, 4932431H17Rik, LOC666680, LOC100040251, Siah2, LOC100040293, Clrn1, LOC100040416, Gpr171, P2ry14, Gpr87, P2ry13, P2ry12, Igsf10, EG666751
Downstream geneEG666756, EG229330, EG435732, LOC433597, LOC433598, LOC100040407, LOC669780, EG666803, C130079G13Rik, LOC676914, Aadacl2, Aadac, Sucnr1, LOC669823
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-148P16.bB6Ng01-148P16.g
ACCDH945441DH945442
length6731,206
definitionDH945441|Mus musculus domesticus DNA, BAC clone: B6Ng01-148P16, 5' end.DH945442|Mus musculus domesticus DNA, BAC clone: B6Ng01-148P16, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttccagggatcagtatctgtgcacagagttcttaatgccagat
aaaccacttcagcttctggactaaggagactggaacactccaagaactgc
aactgtcttagttactattgcttcaacaaaacaccatgacctaaaagcaa
actggggagaaaaaggtttatttggcttacacttccacagtgttgtttgt
cactgaagaaaactgtggcaggaactcaagctaggctgggcctgaagtag
gagctgatgcagaggccatggaggattgctgcttagttgtttcccatggc
ttggtcagcctgctttcttatagaacacaggactacctgcccagagataa
cactacccaccatagaatcagccttccccaaaggattactaattgaggaa
atgccttagagctggatatcatggtgggggggtgtgcatttccttagctg
agactccttcctctctgatgactctaacttgtatcaagttgacacagtat
cagtcagtatatacactatcacttaataaatgaacttgacttttgaggtt
gtaaccatgttagagattaatgttattgcctcctgagtaaatttgtaata
aaatgtcctctctcctgtattctgtgtttgctctctctctctctctctct
ctctctctctctctctctctctc
gaattcagaacttttcagctgggggaacgagagtaccagtgagtatagct
ttacgaggtaagcctggccttgaactttctaaggaaattcaagacagtct
atcagaagtaaagtggaaaatgtttggccttgaattttttctggtgttag
gagcccttttgttccttttcacatgttatcaagtgattaagatagggctg
aaaattctagaggaaattcaggacaagctatcagaagtaaagtggggaga
gagagtaggaacaaagaggaaatatggtacacaaaataagtatacaggcc
tttccaagggtcttgaacccgaggaaaagtttaggtcaggtaagaatacc
tggggagagattagaaggaaggaaaagaaaaaagaaaagaaaaaagatcg
attagcggaggtctctaggagatactcgtcactagatgagctcaggaagc
cagctcttagtagctctgaagcagatgaagaattctcctctgaggaaaca
gactgggaggaagaagcagctcattatgagaaaaaagggtaccagccagg
taaagtgctagctaatcagttaaggaagccaaaagcggctggcgaaggcc
agtttgctgattggcctcagggcagtcggcttcaaggtccgccctatgcg
gagtccccgccctgcgtagtgcgtcagccctgcgcagagagacaatgcgc
agagaggcagtgcgcagactcattcattcccagagaggaacaaaggaaaa
tacaacaggcatttccagtctttgaaggagccgagggtgggcgtgtccac
gctccggtagaatacttacaaattaaagaactcgccgagtcggtccgtaa
atatgggaaccaatgctaattttaccttggtgcagttagacaggcttgcc
ggcatggcactaactcctgccgactggcaacgggttgtaaagccgctctc
cctagtatgggcaaatatatggaatgagagctctttgggcatgaaactgc
acagcgcagcccgagcaaacgcagctgcttgactccagagcagagaagat
ggacttttgactgtaacggtcaagtagctatttctgctgatcaacaacct
accattgggggcttagtgcccaagtttctctcacgcctatagggcctgaa
agcgcacactccttggaccaggtgtaaaccccactggttcctattttaca
aaggta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_59207147_59207819
seq2: B6Ng01-148P16.b_48_720 (reverse)

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCAAACAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCAAACAC  50

seq1  AGAATACAGGAGAGAGGACATTTTATTACAAATTTACTCAGGAGGCAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATACAGGAGAGAGGACATTTTATTACAAATTTACTCAGGAGGCAATA  100

seq1  ACATTAATCTCTAACATGGTTACAACCTCAAAAGTCAAGTTCATTTATTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTAATCTCTAACATGGTTACAACCTCAAAAGTCAAGTTCATTTATTA  150

seq1  AGTGATAGTGTATATACTGACTGATACTGTGTCAACTTGATACAAGTTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATAGTGTATATACTGACTGATACTGTGTCAACTTGATACAAGTTAG  200

seq1  AGTCATCAGAGAGGAAGGAGTCTCAGCTAAGGAAATGCACACCCCCCCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATCAGAGAGGAAGGAGTCTCAGCTAAGGAAATGCACACCCCCCCAC  250

seq1  CATGATATCCAGCTCTAAGGCATTTCCTCAATTAGTAATCCTTTGGGGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATATCCAGCTCTAAGGCATTTCCTCAATTAGTAATCCTTTGGGGAA  300

seq1  GGCTGATTCTATGGTGGGTAGTGTTATCTCTGGGCAGGTAGTCCTGTGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGATTCTATGGTGGGTAGTGTTATCTCTGGGCAGGTAGTCCTGTGTT  350

seq1  CTATAAGAAAGCAGGCTGACCAAGCCATGGGAAACAACTAAGCAGCAATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAAGAAAGCAGGCTGACCAAGCCATGGGAAACAACTAAGCAGCAATC  400

seq1  CTCCATGGCCTCTGCATCAGCTCCTACTTCAGGCCCAGCCTAGCTTGAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATGGCCTCTGCATCAGCTCCTACTTCAGGCCCAGCCTAGCTTGAGT  450

seq1  TCCTGCCACAGTTTTCTTCAGTGACAAACAACACTGTGGAAGTGTAAGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGCCACAGTTTTCTTCAGTGACAAACAACACTGTGGAAGTGTAAGCC  500

seq1  AAATAAACCTTTTTCTCCCCAGTTTGCTTTTAGGTCATGGTGTTTTGTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAACCTTTTTCTCCCCAGTTTGCTTTTAGGTCATGGTGTTTTGTTG  550

seq1  AAGCAATAGTAACTAAGACAGTTGCAGTTCTTGGAGTGTTCCAGTCTCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAATAGTAACTAAGACAGTTGCAGTTCTTGGAGTGTTCCAGTCTCCT  600

seq1  TAGTCCAGAAGCTGAAGTGGTTTATCTGGCATTAAGAACTCTGTGCACAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCCAGAAGCTGAAGTGGTTTATCTGGCATTAAGAACTCTGTGCACAG  650

seq1  ATACTGATCCCTGGAAAGAATTC  673
      |||||||||||||||||||||||
seq2  ATACTGATCCCTGGAAAGAATTC  673