BAC Information

Click to search

BAC

Clone NameB6Ng01-149G14
Chromosome3 (Build37)
Map Location 18,601,520 - 18,602,656
singlet/doubletsinglet
Overlap genenone
Upstream geneENSMUSG00000074674, LOC100040120, Cypt12, LOC545508, Bhlhb5, Cyp7b1, LOC622921, LOC100040153
Downstream geneArmc1, Mtfr1, Pde7a, Dnajc5b, EG620290, Trim55, Crh
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-149G14.bB6Ng01-149G14.g
ACCDH945756DH945757
length1,2691,139
definitionDH945756|Mus musculus domesticus DNA, BAC clone: B6Ng01-149G14, 5' end.DH945757|Mus musculus domesticus DNA, BAC clone: B6Ng01-149G14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggccaatacctaaacatgataaaagcaacatacagcaaacca
gtaaccaacatcaaactaaatggagagaaacttgaagcaatcccactaaa
atcagggacgagacaaggctgcccactctttccctacctattcaatatag
tagtggaagtcctagccagagaaattagacaacaaaaggagatcaaaggg
atacaaattggaaaggaagcagacaacatatcactatttgcagatgatat
gatagtatacatatatgaccccaaaaattccatcagacaactcctaaacc
tgataaattatttcaacaaagtggctggatttaaaattaactcaaacaaa
tcagtggccttcctctactcaaaggataaacaggctgagaaagaaattag
ggaagcaaaacccttcacaatagtcacaaataatataaaataccttggca
tagctctcactaaggaagtggaaaatctttatgataagaactacaagtct
ctcaaagacctcagaagatggaaagatctcccatgctcatggattagaag
gattaatgtagtaaaaatggctctcgcgtcaaaagttatctaccttttca
atgcaatccccatgaaaattccaactcaattattcatagatttataaaga
gcaatttccaaattcatctggataacaaaaaacccaggatagtgaaagat
cttctcaacaataaaagaacttctgggggaataaccatccctgacctcac
aatttcctacagagcaattgtgataaaaactgtatggtactggtacaatg
acaggtagatcaatggaataaaattgaaaggcccagaaatgaacccacac
acctatcgtcacttgatctttgacaaaggagttaaaaccatccagtggaa
aaaggacagcattttcaacaaaaagtgctggttcaactggtgattagcat
gtagaagaatgcaaattgatccattccttatctccttgtacaaagctcaa
gtctagtgcatcaagtactacaaatttaaaccagaagaaactgaaactta
tagaggagaaagtggggggacagccttgaaatatgggaacacagggaaga
tttctttaaagtacacccagtgcttgtgctgtaagatcaagatctgacaa
atggtgaacctatataatgccaagctttctggtaaagcagaggactggta
tagacaaaggcaaccactatttggaaggtcttttttacattctctactct
cgtaatatatgagtgtgta
gaattcaaagttctgctggcctaaatagtgaattcaaggccaacatggac
tgtatgaaatcctttctcagaaagaaaagaaagagaaggaaggttaaatg
gaccaaacatcaaagcaaaaaacaaaacaatacaaaaatttcctctcagt
gtaatcactattgcattcccaaactttaaaatgggtgagagcatccagtt
tattctctctataactagtccatctcttcatttaacagatcagaaaacta
agatcagggtcagtaaagtgacttgctcaaagcttagaaatttggtgaat
atagttgccatgtaaatacaaaagcaagttgttgaatagagacatatata
gaaagctatggaagcagaggtggaggaggcttggctaagatgacaacctt
gggaagaaagggtgtcccatctgtcctaagggtgagaaaggcatttcatt
tagaaaatgaagcctgtcagagcctaggtgtaggaagccatatgagtccc
agagaacataaaccttcattatgggtttagtatcctgaccacagatatat
ttgtatctgttaaagctgttaaagaagacaaagccatctgaactttgttc
ttctgtgtgatgacaggggtttttaaagacctcttagagagtaatgtcaa
aagaagcacatccaatcttgagctaaatagggtgagggactccatctccc
tcccagaggtgtaccacagctggtgtgaaaacaatctagcattttagtgg
tctccctgaatagaagaaaagactacttgaacttcagactaggtgtttcc
tgctggattggagccaaataacgtttaaatattagtctatccctgatggc
catagctgaatctcttaacttgggcaagcacactttataactctgatctt
cttctctaaccaataacatggtggttgcctatatatttgttgaaggattg
gtttgcaggcttctccctgtgaatactaagctgaagcaagtttgagtcct
tttttattaaggcataaaagtatctggtgtctaacctgcagcatcctcct
gtataccatatatctctcttaggatcttttttatatcttacctggcaatt
attctggcaaaggagttgccctctgtatttttagagtac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_18601520_18602656
seq2: B6Ng01-149G14.g_71_1209 (reverse)

seq1  GTACTCCTAAAAATTACAGCATGGCAACTCCTTTGACAGAATTAATGCCA  50
      ||||| ||||||| ||||| | ||||||||||||| |||||| | |||||
seq2  GTACT-CTAAAAA-TACAG-AGGGCAACTCCTTTGCCAGAATAATTGCCA  47

seq1  TGTAAGATATAAAAAATGATCTAGAGAG-GATATATGGTATACAGAAGGA  99
       ||||||||||||||| ||||   |||| |||||||||||||||| ||||
seq2  GGTAAGATATAAAAAA-GATCCTAAGAGAGATATATGGTATACAGGAGGA  96

seq1  TGCTGCAGGTTAGACA-CAGATACTTTTATG-CTTTATATAAAA-GACTC  146
      |||||||||||||||| |||||||||||||| ||| ||| |||| |||||
seq2  TGCTGCAGGTTAGACACCAGATACTTTTATGCCTTAATAAAAAAGGACTC  146

seq1  AAACCTGCTTCAGCTTAGTATCCACAGGGAGAAGCCTGCAAACCAATCCT  196
      |||| |||||||||||||||| ||||||||||||||||||||||||||||
seq2  AAACTTGCTTCAGCTTAGTATTCACAGGGAGAAGCCTGCAAACCAATCCT  196

seq1  TC-ACAAATATATAGGCAACCACCATGTTATTGGTTAGAGAAGAAGATCA  245
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACAAATATATAGGCAACCACCATGTTATTGGTTAGAGAAGAAGATCA  246

seq1  GAGTTATAAAGTGTGCTTGCCCAAGTTAAGAGATTCAGCTATGGCCATCA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTATAAAGTGTGCTTGCCCAAGTTAAGAGATTCAGCTATGGCCATCA  296

seq1  GGGATAGACTAATATTTAAACGTTATTTGGCTCCAATCCAGCAGGAAACA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATAGACTAATATTTAAACGTTATTTGGCTCCAATCCAGCAGGAAACA  346

seq1  CCTAGTCTGAAGTTCAAGTAGTCTTTTCTTCTATTCAGGGAGACCACT-A  394
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CCTAGTCTGAAGTTCAAGTAGTCTTTTCTTCTATTCAGGGAGACCACTAA  396

seq1  AATGCTAGATTGTTTTCACACCAGCTGTGGTACACCTCTGGGAGGGAGAT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTAGATTGTTTTCACACCAGCTGTGGTACACCTCTGGGAGGGAGAT  446

seq1  GGAGTCCCTCACCCTATTTAGCTCAAGATTGGATGTGCTTCTTTTGACAT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTCCCTCACCCTATTTAGCTCAAGATTGGATGTGCTTCTTTTGACAT  496

seq1  TACTCTCTAAGAGGTCTTTAAAAACCCCTGTCATCACACAGAAGAACAAA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTCTAAGAGGTCTTTAAAAACCCCTGTCATCACACAGAAGAACAAA  546

seq1  GTTCAGATGGCTTTGTCTTCTTTAACAGCTTTAACAGATACAAATATATC  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAGATGGCTTTGTCTTCTTTAACAGCTTTAACAGATACAAATATATC  596

seq1  TGTGGTCAGGATACTAAACCCATAATGAAGGTTTATGTTCTCTGGGACTC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTCAGGATACTAAACCCATAATGAAGGTTTATGTTCTCTGGGACTC  646

seq1  ATATGGCTTCCTACACCTAGGCTCTGACAGGCTTCATTTTCTAAATGAAA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGGCTTCCTACACCTAGGCTCTGACAGGCTTCATTTTCTAAATGAAA  696

seq1  TGCCTTTCTCACCCTTAGGACAGATGGGACACCCTTTCTTCCCAAGGTTG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTTCTCACCCTTAGGACAGATGGGACACCCTTTCTTCCCAAGGTTG  746

seq1  TCATCTTAGCCAAGCCTCCTCCACCTCTGCTTCCATAGCTTTCTATATAT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTTAGCCAAGCCTCCTCCACCTCTGCTTCCATAGCTTTCTATATAT  796

seq1  GTCTCTATTCAACAACTTGCTTTTGTATTTACATGGCAACTATATTCACC  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTATTCAACAACTTGCTTTTGTATTTACATGGCAACTATATTCACC  846

seq1  AAATTTCTAAGCTTTGAGCAAGTCACTTTACTGACCCTGATCTTAGTTTT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTCTAAGCTTTGAGCAAGTCACTTTACTGACCCTGATCTTAGTTTT  896

seq1  CTGATCTGTTAAATGAAGAGATGGACTAGTTATAGAGAGAATAAACTGGA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATCTGTTAAATGAAGAGATGGACTAGTTATAGAGAGAATAAACTGGA  946

seq1  TGCTCTCACCCATTTTAAAGTTTGGGAATGCAATAGTGATTACACTGAGA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTCACCCATTTTAAAGTTTGGGAATGCAATAGTGATTACACTGAGA  996

seq1  GGAAATTTTTGTATTGTTTTGTTTTTTGCTTTGATGTTTGGTCCATTTAA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATTTTTGTATTGTTTTGTTTTTTGCTTTGATGTTTGGTCCATTTAA  1046

seq1  CCTTCCTTCTCTTTCTTTTCTTTCTGAGAAAGGATTTCATACAGTCCATG  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCTTCTCTTTCTTTTCTTTCTGAGAAAGGATTTCATACAGTCCATG  1096

seq1  TTGGCCTTGAATTCACTATTTAGGCCAGCAGAACTTTGAATTC  1137
      |||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCCTTGAATTCACTATTTAGGCCAGCAGAACTTTGAATTC  1139