BAC Information

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BAC

Clone NameB6Ng01-149H15
Chromosome3 (Build37)
Map Location 24,031,586 - 24,032,725
singlet/doubletsinglet
Overlap geneEG635702
Upstream geneLOC100039548
Downstream geneEG665189
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-149H15.bB6Ng01-149H15.g
ACCDH945805DH945806
length1,2301,124
definitionDH945805|Mus musculus domesticus DNA, BAC clone: B6Ng01-149H15, 5' end.DH945806|Mus musculus domesticus DNA, BAC clone: B6Ng01-149H15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaataatgaaaagctgagaagcacctaaaaaatgt
tcaatgtcttcaatcatcagggaaatgcagatcaaaacaactctgagatt
caacctcataccagtcagaatgactaagatgaaaactcaggtgacagcag
atgctggtgaggatgtggagaaagaggaacactcctctattgctggtagg
attgcaagctggtacaaccactctggaaatcagtttggcaattcctcaga
aaattggacatagtactactggaagatccagcaataccactcctgggcat
atacccagaagatgatctaacatggaataaggatacatgctccactatgt
cataacagccctatttataatagccagaaactggaaataacccagatgtc
cctctacaggggaatggaaacaaacaaacaaacaaaatgtgctacattta
cacaatggagtattactcaactattaaaaacaaagaatttatgaaacatt
tagacaaatggatggatatgggggatatcatcctgagtgaggtaacccaa
tcacaaaagaacacatgtgatatgtactcactaataagtggatattagct
cagaagctcagaatacccaagatacaatttgcaaaacacatgaaactcaa
gaagaaggaagacaatgtgtggatacttctttccttcttagaaaggagaa
caaaatccccatggaaggagttacagagacaaagttcagagcctagactg
aagaaatgaccatccagagactgtcccaccaggggattcagcccataaac
aaccaccaaacacagacactattgcagatgccatcaagtgtttgctcaca
ggatactaatatagctgtctcctcagagttcctgccagtgcctgacaaat
acagaagtggatgctcatagccattcattggacagagcacagggtcccta
atgaaggagctagagacgtacccaaggagatgaaggggttgcatccccat
aggcgaacaacagtatgactaccagtacccccagagctgcctgggactga
caccagtcaagaatcacatggtgaagactatgctctagctgcatatgtag
caagaatggcctatcagtcattcaatgtgaagggaaatcctgtttcttgt
atgttctatggcccagtatagaatgcaagtccagagcaaggatagtgcgg
ttggcagcatagatgaggtgaaggtctaca
gaattcaagtccctttaatttggaattttcaaagtccctataaactgaac
atgaccgcatttcaagatacttctttaaattattagtttcacatacaatg
gaggacagttaatttgaatgtagaagccctgttattttgcaaagatttga
aggagattgcatccttatatgtttagccaaattttcataataaacatgca
atacagacattctcaaaacattttttaaagatgagaaaacagactttcaa
aaccaagcaatttgtcaggttcatgagaatccaatttttttttcttaagg
agcattaaataacagaaattctggaaagagtggaggagggaaaacaccat
gcttcttgctaccctgtttagatattttcaatttaagttttaatgatgaa
acaatgctgggatattcataatctgaatttaagaacttattaattcccca
caaataatagtcagggcttgatactataaattgatcataaaataattagt
atttgtttttagcaaagaagaaacaacaattttagaatttttgagtgtat
ttcctatactatgaactatttactattcattccagtaatagcaataaata
gaaattcattaccatgaattcacagatatctacagtgttcagttgagtgg
atttattgaattaaaagaacctcagctctcttagatcatattaaaagttc
tttctagttctaaaatgctgaataaactaaacatcacttaaataaagtaa
aactgtaggaaaacaaattatttttatattttatagtcaatctatcaatt
tctttgaactttaaggagtcacaaaaaacctattgcatatatattataat
gatctgtgacacattcatttttttcaagccacaactcttataaaataaga
acatgagtcacgtagttatatgtcctcctctttaaacattgaataaatat
tgaatgtcatgacaaaataatttggtattggtgaagagtatcttgctata
gactgtattggaggattttatttctatataagtgtccccatatctgcacc
cttgatacatacagctgtctcccaaatacttctgaccctagtccaggggt
atcagggattctgtagatcactaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_24031586_24032725
seq2: B6Ng01-149H15.g_66_1189

seq1  GAATTCAAGTCCCTTTAATTTGGAATTTTCAAAGTCCCTATAAACTGAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGTCCCTTTAATTTGGAATTTTCAAAGTCCCTATAAACTGAAC  50

seq1  ATGACCGCATTTCAAGATACTTCTTTAAATTATTAGTTTCACATACAATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACCGCATTTCAAGATACTTCTTTAAATTATTAGTTTCACATACAATG  100

seq1  GAGGACAGTTAATTTGAATGTAGAAGCCCTGTTATTTTGCAAAGATTTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGACAGTTAATTTGAATGTAGAAGCCCTGTTATTTTGCAAAGATTTGA  150

seq1  AGGAGATTGCATCCTTATATGTTTAGCCAAATTTTCATAATAAACATGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGATTGCATCCTTATATGTTTAGCCAAATTTTCATAATAAACATGCA  200

seq1  ATACAGACATTCTCAAAACATTTTTTAAAGATGAGAAAACAGACTTTCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGACATTCTCAAAACATTTTTTAAAGATGAGAAAACAGACTTTCAA  250

seq1  AACCAAGCAATTTGTCAGGTTCATGAGAATCCAATTTTTTTTTCTTAAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAGCAATTTGTCAGGTTCATGAGAATCCAATTTTTTTTTCTTAAGG  300

seq1  AGCATTAAATAACAGAAATTCTGGAAAGAGTGGAGGAGGGAAAACACCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTAAATAACAGAAATTCTGGAAAGAGTGGAGGAGGGAAAACACCAT  350

seq1  GCTTCTTGCTACCCTGTTTAGATATTTTCAATTTAAGTTTTAATGATGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTTGCTACCCTGTTTAGATATTTTCAATTTAAGTTTTAATGATGAA  400

seq1  ACAATGCTGGGATATTCATAATCTGAATTTAAGAACTTATTAATTCCCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGCTGGGATATTCATAATCTGAATTTAAGAACTTATTAATTCCCCA  450

seq1  CAAATAATAGTCAGGGCTTGATACTATAAATTGATCATAAAATAATTAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATAATAGTCAGGGCTTGATACTATAAATTGATCATAAAATAATTAGT  500

seq1  ATTTGTTTTTAGCAAAGAAGAAACAACAATTTTAGAATTTTTGAGTGTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTTTTTAGCAAAGAAGAAACAACAATTTTAGAATTTTTGAGTGTAT  550

seq1  TTCCTATACTATGAACTATTTACTATTCATTCCAGTAATAGCAATAAATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTATACTATGAACTATTTACTATTCATTCCAGTAATAGCAATAAATA  600

seq1  GAAATTCATTACCATGAATTCACAGATATCTACAGTGTTCAGTTGAGTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTCATTACCATGAATTCACAGATATCTACAGTGTTCAGTTGAGTGG  650

seq1  ATTTATTGAATTAAAAGAACCTCAGCTCTCTTAGATCATATTAAAAGTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTGAATTAAAAGAACCTCAGCTCTCTTAGATCATATTAAAAGTTC  700

seq1  TTTCTAGTTCTAAAATGCTGAATAAACTAAACATCACTTAAATAAAGTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAGTTCTAAAATGCTGAATAAACTAAACATCACTTAAATAAAGTAA  750

seq1  AACTGTAGGAAAACAAATTATTTTTATATTTTATAGTCAATCTATCAATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTAGGAAAACAAATTATTTTTATATTTTATAGTCAATCTATCAATT  800

seq1  TCTTTGAACTTTAAGGAGTCACAAAAAACCTATTGCATATATATTATAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGAACTTTAAGGAGTCACAAAAAACCTATTGCATATATATTATAAT  850

seq1  GATCTGTGACACATTCATTTTTTTCAAGCCACAACTCTTATAAAATAAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTGTGACACATTCATTTTTTTCAAGCCACAACTCTTATAAAATAAGA  900

seq1  ACAATGAGTCACGTAGGTTATATGTCCTCCTCTTTAAAACAATTGAATAA  950
      || |||||||||||| ||||||||||||||||||||||   ||||||| |
seq2  AC-ATGAGTCACGTA-GTTATATGTCCTCCTCTTTAAA--CATTGAAT-A  945

seq1  AATATTGAATGTCAATGACAAAATAATTTGGTATTGGTGAAGAAGTATCT  1000
      ||||||||||||| |||||||||||||||||||||||||||| |||||| 
seq2  AATATTGAATGTC-ATGACAAAATAATTTGGTATTGGTGAAG-AGTATC-  992

seq1  TTGCTATAGACTGTAATTGGAGGATTTTTATTTCCTATATAAAGTGTTCC  1050
      |||||||||||||| ||||||||| |||||||| |||||| ||||||   
seq2  TTGCTATAGACTGT-ATTGGAGGA-TTTTATTT-CTATAT-AAGTGT---  1035

seq1  CCCAATATCTGCACCCTTGTATACATACCAGCTGTCTCACAAATACTTCT  1100
      ||| ||||||||||||||| ||||||| |||||||||| |||||||||||
seq2  CCCCATATCTGCACCCTTG-ATACATA-CAGCTGTCTCCCAAATACTTCT  1083

seq1  GACTCTAGGTCAGGGGTATCAGTGATTCTGTAG-TCACTAA  1140
      ||| ||||  |||||||||||| |||||||||| |||||||
seq2  GACCCTAGTCCAGGGGTATCAGGGATTCTGTAGATCACTAA  1124