BAC Information

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BAC

Clone NameB6Ng01-149O14
Chromosome3 (Build37)
Map Location 96,188,484 - 96,189,075
singlet/doubletsinglet
Overlap genenone
Upstream gene4930558C23Rik, LOC277589, LOC668448, LOC100043305, Arnt, Ctsk, Ctss, LOC100043312, Hormad1, Golph3l, EG668457, Ensa, Mcl1, Adamtsl4, Ecm1, Tars2, 4930535B03Rik, LOC100043327, Prpf3, Mrps21, LOC100042889, Gm129, BC028528, Aph1a, Car14, Anp32e, LOC100042897, LOC100042898, EG668224, Plekho1, EG668222, Vps45, LOC100042908, Otud7b, Mtmr11, Sf3b4, Sv2a, Bola1, Hist2h2ab, Hist2h2ac, Hist2h2be, Hist2h3c2, Hist2h2aa1, Hist2h3c1, LOC100043378, Hist2h4, Hist2h3b, Hist2h2bb, Fcgr1
Downstream genePafah1b1-ps1, Terc, BC107364, LOC668500, Hfe2, Txnip, Polr3gl, Ankrd34, 6330549D23Rik, Rbm8a, Pex11b, Itga10, Ankrd35, Pias3, Polr3c, Zfp364, Cd160, Pdzk1, Gpr89, Gja8, 9230114J08Rik, Gja5, Acp6, Bcl9
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-149O14.bB6Ng01-149O14.g
ACCDH946122DH946123
length5871,220
definitionDH946122|Mus musculus domesticus DNA, BAC clone: B6Ng01-149O14, 5' end.DH946123|Mus musculus domesticus DNA, BAC clone: B6Ng01-149O14, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
ttcattgcaccttgtttcttccatgtctcaagggacccagaagggcagcg
aaattcacctagaaaggagacagcaggagactggagagagatatggcttg
gctgttaagaatgttgccagagatggaggcaatggctaagcaataaccaa
cccaacttgagacccatcccatgggcatgcaccaatctcagacactacta
atgatactctgttatattcgcagtcagcctagcataactgtcctctgaga
ggttccacacagcagcggactgaaacagatgcagagacccagagccagac
attgggtggagctgggggagtcttgtggaagagatggggggaggattgaa
gcccacaaagtggataggattccactacagtcaactaacctggacccttg
gctctccgagactgaaccaccagccaaagagagtacacgggctgaactga
atcgtccccacaacccccacatatgtagcaaagtctctatgtggatcccc
caacaactggagtgggggctatcgctaaatctgttgtctgtctgtggaat
gttctcctaactgggcctgctttgtctggcctgcgtg
gaattctcttcctcaggacaattgaatatcattgttctaaaaacagatgt
gtgagaccagacgaggctgaggcaagttctacaaacaattttttaaaaac
taaaaaggggccaaaaatgaatattttggcaaacttctatagaagaccaa
aggcccaagcttaaaatattactaaacactattgagattgaaggaatggt
ggtcactggagcagaggtcaccattatctctccaaaatcttggccttcag
attggccacttcaagaagtagacatcctgtttcaaggagttggactttat
tccgaataaagcaaagcaccagatgttttaaatgtacaaggcctgagggc
cagataggaaaattaaggccatatgtggctgatatagccataaacttatg
gggaatagatctgttacaacagtggaaaacacaacttaatatccctcagt
ttcataggtcagccacaaaacctgtcaggctcctaatttaaaaaaaaatc
aaattagttaaggaacgttatcaaagacggttacaaactgtccaggctgc
ccataaacaagacaaggcagaggctgacaattcaactctacatcaaggag
ccagtgctgatcaaacatcagcaacccccactaaggtggttgactgacca
acccatttggattaatcaatgatctacgacaaaagaaaaactacaggcac
tagaacagcctagtccaggagcagctgggggctcagcacatagaggagtc
caccagcccttggaattctctggtaaatctaatagaggacgttgacagat
ctcacaatgattaataagattattcaccatgggtctctgcagcctggaat
cccattgcctttccttgttgcctaaggaatggtctatcatagtgattgat
ctaaaagattatttttttcacaattcctctacaggacacaataaagaaga
ggtttgctttctagtacctactttattagacgtggccaataaaaagatat
cattggaaagttcctacccaaggaatggttaaataagtcctaccttatgc
caaatatttgtaccaagaatgattatggcaaattgatgtgttccatttac
gaagtttggtaaacctgaaaatggtgcacacactatagacccaatttaga
tttcaatgtcacggcctagcttcgaaggcgtgatctggtctgtaaccatt
tattatagaagttctagtgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_96188484_96189075
seq2: B6Ng01-149O14.b_51_643

seq1  GAATTCTTCATTGCACCTTGTTTCTTCCATGTCTCAAGGGACCCAGAAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCATTGCACCTTGTTTCTTCCATGTCTCAAGGGACCCAGAAGG  50

seq1  GCAGCGAAATTCACCTAGAAAGGAGACAGCAGGAGACTGGAGAGAGATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCGAAATTCACCTAGAAAGGAGACAGCAGGAGACTGGAGAGAGATAT  100

seq1  GGCTTGGCTGTTAAGAATGTTGCCAGAGATGGAGGCAATGGCTAAGCAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTGGCTGTTAAGAATGTTGCCAGAGATGGAGGCAATGGCTAAGCAAT  150

seq1  AACCAACCCAACTTGAGACCCATCCCATGGGCATGCACCAATCTCAGACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAACCCAACTTGAGACCCATCCCATGGGCATGCACCAATCTCAGACA  200

seq1  CTACTAATGATACTCTGTTATATTCGCAGTCAGCCTAGCATAACTGTCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTAATGATACTCTGTTATATTCGCAGTCAGCCTAGCATAACTGTCCT  250

seq1  CTGAGAGGTTCCACACAGCAGCGGACTGAAACAGATGCAGAGACCCAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAGGTTCCACACAGCAGCGGACTGAAACAGATGCAGAGACCCAGAG  300

seq1  CCAGACATTGGGTGGAGCTGGGGGAGTCTTGTGGAAGAGATGGGGGGAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGACATTGGGTGGAGCTGGGGGAGTCTTGTGGAAGAGATGGGGGGAGG  350

seq1  ATTGAAGCCCACAAAGTGGATAGGATTCCACTACAGTCAACTAACCTGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAGCCCACAAAGTGGATAGGATTCCACTACAGTCAACTAACCTGGA  400

seq1  CCCTTGGCTCTCCGAGACTGAACCACCAGCCAAAGAGAGTACACGGGCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTGGCTCTCCGAGACTGAACCACCAGCCAAAGAGAGTACACGGGCTG  450

seq1  AACTGAATCGTCCCCACAACCCCCACATATGTAGCAAAGTCTCTATGTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAATCGTCCCCACAACCCCCACATATGTAGCAAAGTCTCTATGTGG  500

seq1  ATCCCCCAACAACTGGAGTGGGGGCTATCGCTAAATCTGTTGTCTGTCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCCCAACAACTGGAGTGGGGGCTATCGCTAAATCTGTTGTCTGTCTG  550

seq1  TGGAATGTTCTCCTAACT-GGCCTGCTTTGTCTGGCCTGCGTG  592
      |||||||||||||||||| ||||||||||||||||||||||||
seq2  TGGAATGTTCTCCTAACTGGGCCTGCTTTGTCTGGCCTGCGTG  593