BAC Information

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BAC

Clone NameB6Ng01-149P18
Chromosome3 (Build37)
Map Location 40,183,736 - 40,184,665
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040853, LOC100041443, LOC100041458
Downstream geneLOC100040882, Intu, Slc25a31, Hspa4l, Plk4, Mfsd8, LOC100039027, LOC100039043, 3110057O12Rik, 1700034I23Rik, Larp2, Pgrmc2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-149P18.bB6Ng01-149P18.g
ACCDH946178DH946179
length1,225978
definitionDH946178|Mus musculus domesticus DNA, BAC clone: B6Ng01-149P18, 5' end.DH946179|Mus musculus domesticus DNA, BAC clone: B6Ng01-149P18, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttagctttgcaccccctttttaatagggttatttggttct
ctggagactaacttcctgagttccttgtatataatggatattagccctct
atcagatttaggattggtaaagatcttttcccaatctgttggtggccttt
ttgtcttattgacagtgtcctttgccttacagaagctttgcaattttata
aggtttcatttgtcaactcttgatcttacagcacaagccattgctgttct
gttcaggaattttccccccatgcccatatgttcgaggctcttccccactt
tctcctctataagtttcagtgtctctggttttatgtggaggctcttgatc
cacttggacttttgcttgaaagatgatacaaccactctggaaatcagttt
gggggttcctcagaaaattggacatagtactacctgaccactcagctata
ccactcctgggcatataccccaaagatgctctaacatgtaataaggacac
atgctgcactatgttcataacagccttatttataatagccagaagctgga
aagaacccagatgtccctcaacagaagaatggatgcagaaaatgtgatac
atttacacaatggagtactactcagctattaaaaacaataaatttatgaa
attcttagacaaatggatggatctggacgatatcatcctgagtgaggtaa
cccagtcacaaaagaacatacatgatatgcactcaccgattagtggttat
tagcccagaagctcggaattcccaagatacaattcgcaaaacacatgaaa
ctcaagaagaaggaagaccaaagtgtggatacttcgatccttctcagaag
ggggaacaaatacccatggaaagagttacagagacaaagtgtggaccaga
gactaaaggaataaccatctagagactgccccacctggagatccatccca
taaaccaccactatcccagatactattgtggatgttaacagggcttgctg
ataggggctgattataactgtctatgatagctctgcagtgcctgacaaat
acagaagttgatgctcaccaatcattcatgaaagagcacaggtcccatga
gatctagagaaggacccaagaacctgacgggttgtagccataggaggacc
taaattgactaccatacccgaactcccttgggaccatataaccacctacc
aatagagagtgagtgcgcacctaca

gaattctttcagttcccagcacccactttggagtattcacagaagttgta
aatccattccctggggttcctatacctttaataatttccccaggcacctg
caggctcactcacatagccacactaagatgcacacataggtagaactaga
aaattataaatataagtcttcaagcaaggttttggtcactggacttaatt
tcatgttagtaaaacaaaaaaggtattgctaagtatttggaaaaatacaa
tctttgagttgtggaatgtcaaccactaagaagtcattccatgctgacta
gccttaaagaaagatcagaagtccttgagactaagctctcctcttcctta
tcacaggacatgaccagctgacactaactaaacacagacttctagtatcc
actattctggtcctgactgtgggggttcagggtctgaagtggaaatttct
ggtatctttggagacttagttgtgtcatgtgatatttctatggaaactat
cttatgagaggatgtttttgctaaagcaaacttgtgggaggatgttttgc
tgagaacagacacatgatgtttttctggaagctacttggaaaaaagccat
gtgatgttttgctagagtagacacttgagagaagacatgtttggaaaggg
tataaatataacccaatggacagtgaatgacgctgtgtggtattggttcc
ccttgccttcttcaacgatctttgtttgtggtgacttcttagaaaaaacc
ataaagaacacaaagaacttctaatgttcacgtgttcaggtggcttcttg
cagcctctgtgaactcagatcattggcagagcctctcagttttcttctgg
gtcaaactgctgttgctgattcatgattggtgtttgcaagtgtatcaaga
tccctgctgctgatttgtgtgaactgaactgctgctctcctgactacgca
aattgggtttgccccaaagaactattta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_40183736_40184665
seq2: B6Ng01-149P18.g_71_1001

seq1  GAATTCTTTCAGTTCCCAGCACCCACTTTGGAGTATTCACAGAAGTTGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCAGTTCCCAGCACCCACTTTGGAGTATTCACAGAAGTTGTA  50

seq1  AATCCATTCCCTGGGGTTCCTATACCTTTAATAATTTCCCCAGGCACCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCATTCCCTGGGGTTCCTATACCTTTAATAATTTCCCCAGGCACCTG  100

seq1  CAGGCTCACTCACATAGCCACACTAAGATGCACACATAGGTAGAACTAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTCACTCACATAGCCACACTAAGATGCACACATAGGTAGAACTAGA  150

seq1  AAATTATAAATATAAGTCTTCAAGCAAGGTTTTGGTCACTGGACTTAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTATAAATATAAGTCTTCAAGCAAGGTTTTGGTCACTGGACTTAATT  200

seq1  TCATGTTAGTAAAACAAAAAAGGTATTGCTAAGTATTTGGAAAAATACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTTAGTAAAACAAAAAAGGTATTGCTAAGTATTTGGAAAAATACAA  250

seq1  TCTTTGAGTTGTGGAATGTCAACCACTAAGAAGTCATTCCATGCTGACTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGAGTTGTGGAATGTCAACCACTAAGAAGTCATTCCATGCTGACTA  300

seq1  GCCTTAAAGAAAGATCAGAAGTCCTTGAGACTAAGCTCTCCTCTTCCTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTAAAGAAAGATCAGAAGTCCTTGAGACTAAGCTCTCCTCTTCCTTA  350

seq1  TCACAGGACATGACCAGCTGACACTAACTAAACACAGACTTCTAGTATCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGGACATGACCAGCTGACACTAACTAAACACAGACTTCTAGTATCC  400

seq1  ACTATTCTGGTCCTGACTGTGGGGGTTCAGGGTCTGAAGTGGAAATTTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTCTGGTCCTGACTGTGGGGGTTCAGGGTCTGAAGTGGAAATTTCT  450

seq1  GGTATCTTTGGAGACTTAGTTGTGTCATGTGATATTTCTATGGAAACTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATCTTTGGAGACTTAGTTGTGTCATGTGATATTTCTATGGAAACTAT  500

seq1  CTTATGAGAGGATGTTTTTGCTAAAGCAAACTTGTGGGAGGATGTTTTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATGAGAGGATGTTTTTGCTAAAGCAAACTTGTGGGAGGATGTTTTGC  550

seq1  TGAGAACAGACACATGATGTTTTTCTGGAAGCTACTTGGAAAAAAGCCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAACAGACACATGATGTTTTTCTGGAAGCTACTTGGAAAAAAGCCAT  600

seq1  GTGATGTTTTGCTAGAGTAGACACTTGAGAGAAGACATGTTTGGAAAGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGTTTTGCTAGAGTAGACACTTGAGAGAAGACATGTTTGGAAAGGG  650

seq1  TATAAATATAACCCAATGGACAGTGAATGACGCTGTGTGGTATTGGTTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAATATAACCCAATGGACAGTGAATGACGCTGTGTGGTATTGGTTCC  700

seq1  CCTTGCCTTCTTCAACGATCTTTGTTTGTGGTGACTTCTTAGAAAAAACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGCCTTCTTCAACGATCTTTGTTTGTGGTGACTTCTTAGAAAAAACC  750

seq1  ATAAAGAACACAAAGAACTTCTAATGTTCAGGTGTTCAGGTGGCTTCTTG  800
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  ATAAAGAACACAAAGAACTTCTAATGTTCACGTGTTCAGGTGGCTTCTTG  800

seq1  CAGCCTCTGTGAACTCAGATCATTGGCAGAGCCTCTCAG-TTTCTTCTGG  849
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CAGCCTCTGTGAACTCAGATCATTGGCAGAGCCTCTCAGTTTTCTTCTGG  850

seq1  GTCAAACTGCTGTTGCTGATTCATGATTGGTGTTTGCAAGTGTATCAAGA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAACTGCTGTTGCTGATTCATGATTGGTGTTTGCAAGTGTATCAAGA  900

seq1  TCCCTGCTGCTGATTTGTGTGAACTGAACTG  930
      |||||||||||||||||||||||||||||||
seq2  TCCCTGCTGCTGATTTGTGTGAACTGAACTG  931


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