BAC Information

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BAC

Clone NameB6Ng01-150A02
Chromosome3 (Build37)
Map Location 128,339,028 - 128,478,872
singlet/doubletdoublet
Overlap genenone
Upstream geneAlpk1, T2bp, BC002199, 5730508B09Rik, LOC100043382, EG668828
Downstream geneLOC100043393, EG668831, Pitx2, Enpep, LOC100043415, LOC435755, LOC668840, Elovl6, LOC100043758, Egf
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-150A02.bB6Ng01-150A02.g
ACCDH946194DH946195
length1,188693
definitionDH946194|Mus musculus domesticus DNA, BAC clone: B6Ng01-150A02, 5' end.DH946195|Mus musculus domesticus DNA, BAC clone: B6Ng01-150A02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(128,339,028 - 128,340,229)(128,478,179 - 128,478,872)
sequence
gaattcctctgtgggtctcagctatgtttgcggtgaatccttttaatgtt
accttattcttaatacaacatattttagaagatgagatttgtggtgacta
acacaccattttttttaaaaaaaaatgcaaaagtgataaaaggtataaaa
ttaacaatattccgagctgatatttaaataaaatctttaagttaggattt
gctttgttctattgactgtgttcctttaaaagattgttttaaactgcttt
taagctgaacttgaagtttttctagaacatcttttttcttttctttttct
tttgtcttgccagcagaattctcagaggcaaaaggagtgaaatattttgc
tggaggggatactttcctttcaagaagcattcctttgcctcctgaacaag
atggaggaaagagaataaatcaaagacaatgcgaaaacgtgtccagtcaa
aacaattatgaccgtcctgagccatcttaactgtcccgcagattaaatca
tgagatgtaagtgcctttgttatttattcagacagtcaaacatgcatcta
tgttccttccactccttccatttaaatattcctgttcttccctttgatgg
tatgtcaagggaaggcaatgccctttccaacttatctcagacatctgctg
ctgaaggcctcctggtaattatcctcccccttctacccgggcaaggtttg
ctttctttctttcttattttattttggagatgagactaagaggtaaaaag
gaaaaggaactacatttaaatcactttataatctgatgatgtgcctctgt
tgttttcacacaactgacttgcttcatttgcatagacctccggaatggag
acccttttgaaaacagaaatctaaatattcagagtgtgccttaggagctg
ttgtgaaatgaggaccgatggctggtcaaatgcacgaatgtgattttgtc
tttgaagcatccagtgtaagagagggtaatgtatgaggctctttcttgtt
tcttctgcacagttactcttctatccttaatagcggcctggcacgtttat
tgtatgtaagtctccgcttgaagaaagcgaagatttgtctgtggaattct
ctaagaaactggtgcagttgacatggtggagttacatttattggattgtc
ttcctaaggtctaacaaaaggtcctagcattatcgcat
gaattccaattacaccttaatccatgaaatgtaagtggaaggaagggatg
cttattcttgtagctctacagcacataagatgtgcacgcacagcagaaag
agcagtgaatgcacagcgccaatggacttctaaccccactgtatgaaagt
tcttctaaaagctgattcaaagctctctctctctctctctctctctctct
ctctctctctctctctcacacacacacacacacacacacacacacacaca
cacacacacacaaatgctgatattggcagttactatctttttggagaagt
gttgatttgataatgtgtggtatgaatttaattttttttctcctgcattt
cttcactatggatgacttattccttaggaaaccacaaggaaaataaaggt
ttttctccttttgaattgacataatttagatatatattttattaaacaat
tgatcttgaacaatgattcgaaagtccctgatacattcttgagaccaaga
cacagagagtaaaaatgagtcatagacggagaaaagccagaagttagcta
gctaacagattaataatgcttgaagttaaagttcagtttgcttgtaaact
cgtcggtgaatggtctgtttttatagctaaaggaagttaatgtttcattt
ttatatgttgattgcaatatcttcttcatcaaagtatctttaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_128339028_128340229
seq2: B6Ng01-150A02.b_44_1231

seq1  GAATTCCTCTGTGGGTCTCAGCTATGTTTGCGGTGAATCCTTTTAATGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCTGTGGGTCTCAGCTATGTTTGCGGTGAATCCTTTTAATGTT  50

seq1  ACCTTATTCTTAATACAACATATTTTAGAAGATGAGATTTGTGGTGACTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTATTCTTAATACAACATATTTTAGAAGATGAGATTTGTGGTGACTA  100

seq1  ACACACCATTTTTTTTAAAAAAAAATGCAAAAGTGATAAAAGGTATAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACCATTTTTTTTAAAAAAAAATGCAAAAGTGATAAAAGGTATAAAA  150

seq1  TTAACAATATTCCGAGCTGATATTTAAATAAAATCTTTAAGTTAGGATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACAATATTCCGAGCTGATATTTAAATAAAATCTTTAAGTTAGGATTT  200

seq1  GCTTTGTTCTATTGACTGTGTTCCTTTAAAAGATTGTTTTAAACTGCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGTTCTATTGACTGTGTTCCTTTAAAAGATTGTTTTAAACTGCTTT  250

seq1  TAAGCTGAACTTGAAGTTTTTCTAGAACATCTTTTTTCTTTTCTTTTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCTGAACTTGAAGTTTTTCTAGAACATCTTTTTTCTTTTCTTTTTCT  300

seq1  TTTGTCTTGCCAGCAGAATTCTCAGAGGCAAAAGGAGTGAAATATTTTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCTTGCCAGCAGAATTCTCAGAGGCAAAAGGAGTGAAATATTTTGC  350

seq1  TGGAGGGGATACTTTCCTTTCAAGAAGCATTCCTTTGCCTCCTGAACAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGGGATACTTTCCTTTCAAGAAGCATTCCTTTGCCTCCTGAACAAG  400

seq1  ATGGAGGAAAGAGAATAAATCAAAGACAATGCGAAAACGTGTCCAGTCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGGAAAGAGAATAAATCAAAGACAATGCGAAAACGTGTCCAGTCAA  450

seq1  AACAATTATGACCGTCCTGAGCCATCTTAACTGTCCCGCAGATTAAATCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATTATGACCGTCCTGAGCCATCTTAACTGTCCCGCAGATTAAATCA  500

seq1  TGAGATGTAAGTGCCTTTGTTATTTATTCAGACAGTCAAACATGCATCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATGTAAGTGCCTTTGTTATTTATTCAGACAGTCAAACATGCATCTA  550

seq1  TGTTCCTTCCACTCCTTCCATTTAAATATTCCTGTTCTTCCCTTTGATGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCTTCCACTCCTTCCATTTAAATATTCCTGTTCTTCCCTTTGATGG  600

seq1  TATGTCAAGGGAAGGCAATGCCCTTTCCAACTTATCTCAGACATCTGCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCAAGGGAAGGCAATGCCCTTTCCAACTTATCTCAGACATCTGCTG  650

seq1  CTGAAGGCCTCCTGGTAATTATCCTCCCCCTTCTACCCGGGCAAGGTTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGGCCTCCTGGTAATTATCCTCCCCCTTCTACCCGGGCAAGGTTTG  700

seq1  CTTTCTTTCTTTCTTATTTTATTTTGGAGATGAGACTAAGAGGTAAAAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTTCTTTCTTATTTTATTTTGGAGATGAGACTAAGAGGTAAAAAG  750

seq1  GAAAAGGAACTACATTTAAATCACTTTATAATCTGATGATGTGCCTCTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGGAACTACATTTAAATCACTTTATAATCTGATGATGTGCCTCTGT  800

seq1  TGTTTTCACACAACTGACTTGCTTCATTTGCATAGACCTCCGGAATGGAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTCACACAACTGACTTGCTTCATTTGCATAGACCTCCGGAATGGAG  850

seq1  ACCC-TTTGAAAACAGAAATCTAAATATTCAGAGTGTGCCTTAGGAGCTG  899
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTTTTGAAAACAGAAATCTAAATATTCAGAGTGTGCCTTAGGAGCTG  900

seq1  TTGTGAAATGAGGACCGATGGCTGGTCAAATGCACGAATGTGATTTTGTC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGAAATGAGGACCGATGGCTGGTCAAATGCACGAATGTGATTTTGTC  950

seq1  TTTGAAGCATCCAGTGTAAGAGAGGGTAATGTATGAGGCTCTTTCTTGTT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAGCATCCAGTGTAAGAGAGGGTAATGTATGAGGCTCTTTCTTGTT  1000

seq1  TCTTCTGCACAGTTACTC-TCTATCCTTAATAGC-GCCTGGCACCGTTAT  1047
      |||||||||||||||||| ||||||||||||||| |||||||||  ||||
seq2  TCTTCTGCACAGTTACTCTTCTATCCTTAATAGCGGCCTGGCACGTTTAT  1050

seq1  TGTTATGTAGGTTCTCGCCTGAAGGAAAAGCGAAGATTTGTTCCTGTGGG  1097
      || |||||| ||   ||| |||||  |||||||||||||||  |||||| 
seq2  TG-TATGTAAGTCTCCGCTTGAAG--AAAGCGAAGATTTGT--CTGTGGA  1095

seq1  ATTCTCTAAGACACT-GTGCAGGTTGCACATGGTGGAGTTTTACATTTAT  1146
      ||||||||||| ||| ||||| |||| |||||||||||  ||||||||||
seq2  ATTCTCTAAGAAACTGGTGCA-GTTG-ACATGGTGGAG--TTACATTTAT  1141

seq1  TGAAATTGTCTTTCCCCTAGGGTCTTAACAAAATGTGCCTAAAGCTATTA  1196
      ||  ||||||||   |||| |||| |||||||| || |||  ||| ||||
seq2  TG-GATTGTCTT---CCTAAGGTC-TAACAAAAGGT-CCT--AGC-ATTA  1182

seq1  TCGCAT  1202
      ||||||
seq2  TCGCAT  1188

seq1: chr3_128478179_128478872
seq2: B6Ng01-150A02.g_67_759 (reverse)

seq1  TTTAAGATTACTTTGATGAAG-AGATATTTGCACTCAACCTAT-AAAATG  48
      || |||| ||||||||||||| ||||| ||||| ||||| ||| ||||||
seq2  TTAAAGA-TACTTTGATGAAGAAGATA-TTGCAATCAACATATAAAAATG  48

seq1  AACCATTAACTTCCTTTAGCTATAAAAACAGACCATTAACCGATGAGTTT  98
      || |||||||||||||||||||||||||||||||||| ||||| ||||||
seq2  AAACATTAACTTCCTTTAGCTATAAAAACAGACCATTCACCGACGAGTTT  98

seq1  ACAAGAAAAATGAACTTAAACTTCAAGCATTATTAATCTGTTTGCTAGCT  148
      ||||| ||| ||||||| |||||||||||||||||||||||| |||||||
seq2  ACAAGCAAACTGAACTTTAACTTCAAGCATTATTAATCTGTTAGCTAGCT  148

seq1  AACTTCTGGCTTTTCTCCGTCTTTGACTCATTTTTACTCTCTGTGTCTTG  198
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AACTTCTGGCTTTTCTCCGTCTATGACTCATTTTTACTCTCTGTGTCTTG  198

seq1  GTCTCAAGAATGTCTCAGGGACTTTTTGAATCATTGTTCAAGATCAATTG  248
      ||||||||||||| |||||||| ||| |||||||||||||||||||||||
seq2  GTCTCAAGAATGTATCAGGGAC-TTTCGAATCATTGTTCAAGATCAATTG  247

seq1  TTTAATTAAATATATATCTAAATTATGTCAATTCAAATGGAGAAAAACGT  298
      |||||| |||||||||||||||||||||||||||||| |||||||||| |
seq2  TTTAATAAAATATATATCTAAATTATGTCAATTCAAAAGGAGAAAAACCT  297

seq1  TTATTTTCCTTGTGGTTTCCTAAGGAATAAGTCATCCATAGTGAAGAAAT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTCCTTGTGGTTTCCTAAGGAATAAGTCATCCATAGTGAAGAAAT  347

seq1  GCAGGAGAAAAAAAATTAAATTCATACCACACATTATCAAATCAACACTT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGAGAAAAAAAATTAAATTCATACCACACATTATCAAATCAACACTT  397

seq1  CTCCAAAAAGATAGTAACTGCCAATATCAGCATTTGTGTGTGTGTGTGTG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAAAAAGATAGTAACTGCCAATATCAGCATTTGTGTGTGTGTGTGTG  447

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAG  497

seq1  AGAGAGAGAGAGAGAGAGAGAGAGCTTTGAATCAGCTTTTAGAAGAACTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAGAGAGCTTTGAATCAGCTTTTAGAAGAACTT  547

seq1  TCATACAGTGGGGTTAGAAGTCCATTGGCGCTGTGCATTCACTGCTCTTT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATACAGTGGGGTTAGAAGTCCATTGGCGCTGTGCATTCACTGCTCTTT  597

seq1  CTGCTGTGCGTGCACATCTTATGTGCTGTAGAGCTACAAGAATAAGCATC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGTGCGTGCACATCTTATGTGCTGTAGAGCTACAAGAATAAGCATC  647

seq1  CCTTCCTTCCACTTACATTTCATGGATTAAGGTGTAATTGGAATTC  694
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCTTCCACTTACATTTCATGGATTAAGGTGTAATTGGAATTC  693