BAC Information

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BAC

Clone NameB6Ng01-150C02
Chromosome3 (Build37)
Map Location 67,836,602 - 68,024,486
singlet/doubletdoublet
Overlap geneEG208426
Upstream geneRsrc1, Mlf1, Gfm1, Lxn, Rarres1, Mfsd1, LOC667207, Gm412
Downstream geneEG545531, LOC631379, Schip1, Il12a, LOC639530, 1110032F04Rik, Ift80, Smc4, Trim59, LOC667272, Kpna4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-150C02.bB6Ng01-150C02.g
ACCDH946289DH946290
length1,208763
definitionDH946289|Mus musculus domesticus DNA, BAC clone: B6Ng01-150C02, 5' end.DH946290|Mus musculus domesticus DNA, BAC clone: B6Ng01-150C02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,836,602 - 67,837,820)(68,023,723 - 68,024,486)
sequence
gaattcactctctgctcccggccatgttaaaaaaaatgtggagaccaatt
tttgaatatgaacattgtcaataattcctaccagtcatttttcctccttg
gctggtgctgaatcctacaggagattgggactgtttctactgtcttccac
tgcagtctcacacaaagggcagtgcctgacccttgactgcatctgctacg
aaatgactagaacagtgatcaaatggctgaaagagagttcactgatttct
aacatcctttactgtctttcttaattttaataattgttttctagggaaag
atttaaatgatgatgtcaagataatgtaggtgggattgggacagtagctg
tctctatgtgtcttttgtgcctttacactcaggttcaatggtgggtttca
agatatggtactttctgaaactggcctccaggtgactgaaagacaaggaa
aattatggagataaaagggagccacttgatggtgatctgcgtgttcaact
acatactatagtgtgtgctgctctcttgtttctctttgtaaggatttgct
ttatccttgttttgtaaatttttttaaagatctagtcccattatatagcc
ctagctcatatatagcctgaaactcaaagatcaggatggcctccaactca
cagagatcccctgcttacctctagagttgtaggatccaaggcatgtacca
caatacctggctcccatttggttaaatcatccaaacaccaagactgactc
attccacgattcatagagtttgacctctaaccttctgaagctctaagagg
tttgtatgtggtgagggtagaaatatcaggggaaggggctgaagggcatc
cagagcagggtgcaaagactcttctctgactcttttctacagtcctgtga
ggcttaaaggcttaggatctacctgctagtgatggagataagaaagtttt
gatccattcttctgttgagggcatctggcttctttcagcttctggctatt
ataaataatgctgctatggaacatagtggagcatgtgtccttcttacgtt
gaacatcttctgcatatatggcccaaggaaggtttgcagaatctctcagt
aagtatctatgttcatttctgagggaccgccgaactgaattcgattgggt
gttacaagcttgcaatcccacccacatggaggagtgttttcttctcccat
ctcgccag
gaattctctttactgcaattaatgagggctataatgagccttggttctgg
ttttggtgatgatcctgctagtcataattaattcacagttagagctgata
ttcataatttttaataatagaattccggttaaaggcatttgtttgtctat
tttgagttaaggtcttgctctatagcctggtgtgacactgactttgtaac
ccccttctaccgcagcaccagaagggctgagatcacaagtatgtaccatt
gctttaatcactctttattactctttcctacctggtgagggatggcatta
catttattaaattcatttgccttatctattggtgattaggtgaatcctca
tatttaatatgttagtgttttatataaacatttaactgtattaaattatc
cttgcatttctagaatgaaaatgacttgaattattttatctagtatttat
cataacatttaacatttgtatcaggaaaggaacgaacttggatttgtgca
gtatgtctttgtattgcaccatccattttccttgctttatagcttgaact
gcatatattttacatataattgttttttgaaataacttatagtaatggag
ttatttgaataaataaaaaatgattaggaacccatccagaagcatgcacg
catgcacacacacacacacacgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
tgtgtgtgcgcgtgcgtgcgtgcgtatgttaatttatgtatctttctagg
tccctctctgtct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_67836602_67837820
seq2: B6Ng01-150C02.b_49_1256

seq1  GAATTCACTCTCTGCTCCCGGCCATGTTAAAAAAAATGTGGAGACCAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCTCTGCTCCCGGCCATGTTAAAAAAAATGTGGAGACCAATT  50

seq1  TTTGAATATGAACATTGTCAATAATTCCTACCAGTCATTTTTCCTCCTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAATATGAACATTGTCAATAATTCCTACCAGTCATTTTTCCTCCTTG  100

seq1  GCTGGTGCTGAATCCTACAGGAGATTGGGACTGTTTCTACTGTCTTCCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGTGCTGAATCCTACAGGAGATTGGGACTGTTTCTACTGTCTTCCAC  150

seq1  TGCAGTCTCACACAAAGGGCAGTGCCTGACCCTTGACTGCATCTGCTACG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGTCTCACACAAAGGGCAGTGCCTGACCCTTGACTGCATCTGCTACG  200

seq1  AAATGACTAGAACAGTGATCAAATGGCTGAAAGAGAGTTCACTGATTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGACTAGAACAGTGATCAAATGGCTGAAAGAGAGTTCACTGATTTCT  250

seq1  AACATCCTTTACTGTCTTTCTTAATTTTAATAATTGTTTTCTAGGGAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCCTTTACTGTCTTTCTTAATTTTAATAATTGTTTTCTAGGGAAAG  300

seq1  ATTTAAATGATGATGTCAAGATAATGTAGGTGGGATTGGGACAGTAGCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAATGATGATGTCAAGATAATGTAGGTGGGATTGGGACAGTAGCTG  350

seq1  TCTCTATGTGTCTTTTGTGCCTTTACACTCAGGTTCAATGGTGGGTTTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTATGTGTCTTTTGTGCCTTTACACTCAGGTTCAATGGTGGGTTTCA  400

seq1  AGATATGGTACTTTCTGAAACTGGCCTCCAGGTGACTGAAAGACAAGGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATGGTACTTTCTGAAACTGGCCTCCAGGTGACTGAAAGACAAGGAA  450

seq1  AATTATGGAGATAAAAGGGAGCCACTTGATGGTGATCTGCGTGTTCAACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATGGAGATAAAAGGGAGCCACTTGATGGTGATCTGCGTGTTCAACT  500

seq1  ACATACTATAGTGTGTGCTGCTCTCTTGTTTCTCTTTGTAAGGATTTGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACTATAGTGTGTGCTGCTCTCTTGTTTCTCTTTGTAAGGATTTGCT  550

seq1  TTATCCTTGTTTTGTAAATTTTTTTAAAGATCTAGTCCCATTATATAGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCCTTGTTTTGTAAATTTTTTTAAAGATCTAGTCCCATTATATAGCC  600

seq1  CTAGCTCATATATAGCCTGAAACTCAAAGATCAGGATGGCCTCCAACTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCTCATATATAGCCTGAAACTCAAAGATCAGGATGGCCTCCAACTCA  650

seq1  CAGAGATCCCCTGCTTACCTCTAGAGTTGTAGGATCCAAGGCATGTACCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGATCCCCTGCTTACCTCTAGAGTTGTAGGATCCAAGGCATGTACCA  700

seq1  CAATACCTGGCTCCCATTTGGTTAAATCATCCAAACACCAAGACTGACTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATACCTGGCTCCCATTTGGTTAAATCATCCAAACACCAAGACTGACTC  750

seq1  ATTCCACGATTCATAGAGTTTGACCTCTAACCTTCTGAAGCTCTAAGAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCACGATTCATAGAGTTTGACCTCTAACCTTCTGAAGCTCTAAGAGG  800

seq1  TTTGTATGTGGTGAGGGTAGAAATATCAGGGGAAGGGGCTGAAGGGCATC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTATGTGGTGAGGGTAGAAATATCAGGGGAAGGGGCTGAAGGGCATC  850

seq1  CAGAGCAGGGTGCAAAGACTCTTCTCTGACTCTTTTCTACAGTCCTGTGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCAGGGTGCAAAGACTCTTCTCTGACTCTTTTCTACAGTCCTGTGA  900

seq1  GGCTTAAGGGCTTAGGATCTACCTGCTAGTGATGGAGATAAAGAAAGTTT  950
      ||||||| ||||||||||||||||||||||||||||||| ||||||||||
seq2  GGCTTAAAGGCTTAGGATCTACCTGCTAGTGATGGAGAT-AAGAAAGTTT  949

seq1  TGATCCATTCCTCTGTTGAGGGGCATCTGGCTTCTTTCCAGCTTCTGGCT  1000
      |||||||||| |||||||| ||||||||||||||||| ||||||||||||
seq2  TGATCCATTCTTCTGTTGA-GGGCATCTGGCTTCTTT-CAGCTTCTGGCT  997

seq1  ATTATAAATAATGCTGCTAT-GAACATAGTGGAGCATGTGTCCTTCTTAC  1049
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  ATTATAAATAATGCTGCTATGGAACATAGTGGAGCATGTGTCCTTCTTAC  1047

seq1  CGGTTGGAACATCTTCTGCATATAT-GCCCAAGAGAGGTATTGCAGGATC  1098
        ||| ||||||||||||||||||| |||||||  |||| |||||| |||
seq2  --GTT-GAACATCTTCTGCATATATGGCCCAAGGAAGGT-TTGCAGAATC  1093

seq1  CTCCAGT-AGTA-CTATGTCCAATTTTCTGAGGAACCGCCAGACTGATTT  1146
         |||| |||| |||||| ||  ||||||||| ||||||  ||||| ||
seq2  TCTCAGTAAGTATCTATGTTCA--TTTCTGAGGGACCGCCGAACTGAATT  1141

seq1  CCAGAGTGGTTG-TACAAGCTTGCAATCCCACCAACAATGGAGGAATGTT  1195
      |  || ||| || |||||||||||||||||||| || |||||||| ||||
seq2  C--GATTGGGTGTTACAAGCTTGCAATCCCACCCAC-ATGGAGGAGTGTT  1188

seq1  TCTCTTTCTCCACATCCTCGCCAG  1219
      | || |||||| ||| ||||||||
seq2  T-TC-TTCTCC-CAT-CTCGCCAG  1208

seq1: chr3_68023723_68024486
seq2: B6Ng01-150C02.g_69_831 (reverse)

seq1  AGACAGAGAGGGACCAAGGGAGATACCCAACATTGACATCTGACTGCATG  50
      ||||||||||||||| ||  ||||||  || ||| ||||  |   ||| |
seq2  AGACAGAGAGGGACCTAGAAAGATACATAA-ATTAACATACGCACGCACG  49

seq1  CAAGTACACACACACACACACACACACACACACACACACACACGTGTGTG  100
      || |  ||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGCGCACACACACACACACACACACACACACACACACACACGTGTGTG  99

seq1  TGTGTGTGTGCATGCGTGCATGCTTCTGGATGGGTTCCTAATCATTTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGCATGCGTGCATGCTTCTGGATGGGTTCCTAATCATTTTTT  149

seq1  ATTTATTCAAATAACTCCATTACTATAAGTTATTTCAAAAAACAATTATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTCAAATAACTCCATTACTATAAGTTATTTCAAAAAACAATTATA  199

seq1  TGTAAAATATATGCAGTTCAAGCTATAAAGCAAGGAAAATGGATGGTGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAATATATGCAGTTCAAGCTATAAAGCAAGGAAAATGGATGGTGCA  249

seq1  ATACAAAGACATACTGCACAAATCCAAGTTCGTTCCTTTCCTGATACAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAAAGACATACTGCACAAATCCAAGTTCGTTCCTTTCCTGATACAAA  299

seq1  TGTTAAATGTTATGATAAATACTAGATAAAATAATTCAAGTCATTTTCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAAATGTTATGATAAATACTAGATAAAATAATTCAAGTCATTTTCAT  349

seq1  TCTAGAAATGCAAGGATAATTTAATACAGTTAAATGTTTATATAAAACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGAAATGCAAGGATAATTTAATACAGTTAAATGTTTATATAAAACAC  399

seq1  TAACATATTAAATATGAGGATTCACCTAATCACCAATAGATAAGGCAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATATTAAATATGAGGATTCACCTAATCACCAATAGATAAGGCAAAT  449

seq1  GAATTTAATAAATGTAATGCCATCCCTCACCAGGTAGGAAAGAGTAATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTAATAAATGTAATGCCATCCCTCACCAGGTAGGAAAGAGTAATAA  499

seq1  AGAGTGATTAAAGCAATGGTACATACTTGTGATCTCAGCCCTTCTGGTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGATTAAAGCAATGGTACATACTTGTGATCTCAGCCCTTCTGGTGC  549

seq1  TGCGGTAGAAGGGGGTTACAAAGTCAGTGTCACACCAGGCTATAGAGCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGGTAGAAGGGGGTTACAAAGTCAGTGTCACACCAGGCTATAGAGCAA  599

seq1  GACCTTAACTCAAAATAGACAAACAAATGCCTTTAACCGGAATTCTATTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTTAACTCAAAATAGACAAACAAATGCCTTTAACCGGAATTCTATTA  649

seq1  TTAAAAATTATGAATATCAGCTCTAACTGTGAATTAATTATGACTAGCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAATTATGAATATCAGCTCTAACTGTGAATTAATTATGACTAGCAG  699

seq1  GATCATCACCAAAACCAGAACCAAGGCTCATTATAGCCCTCATTAATTGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCATCACCAAAACCAGAACCAAGGCTCATTATAGCCCTCATTAATTGC  749

seq1  AGTAAAGAGAATTC  764
      ||||||||||||||
seq2  AGTAAAGAGAATTC  763