BAC Information

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BAC

Clone NameB6Ng01-150F01
Chromosome3 (Build37)
Map Location 114,449,014 - 114,449,938
singlet/doubletsinglet
Overlap genenone
Upstream geneCol11a1, LOC100043220
Downstream geneOlfm3, EG546808, Edg1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-150F01.bB6Ng01-150F01.g
ACCDH946425DH946426
length1,210918
definitionDH946425|Mus musculus domesticus DNA, BAC clone: B6Ng01-150F01, 5' end.DH946426|Mus musculus domesticus DNA, BAC clone: B6Ng01-150F01, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgagccccaatttaatggagttatttgatttt
ctggggtccactttcttgtgctctttgtatatattggatattagtcccct
atctgatttaggataggtaaagatcctttcccaatctggtggtggccttt
ttgtcttattgatggtgtcttttgccttacagaaattttacaattttatg
aggacccatctgtctattctcaatattacagaacaagtcattgctgttct
attcaggaatttttcccctgtgcccatatcttcgaggcttttcctcactt
tctcctctataagtttatctgtctctagttttatgtagagttccttgata
cacttagatttgaccttagtacaaggagatagaaatggatcaattcgcat
tcttcaacatgataaacaccagttgtgccaccaccatttgttgaaagtgc
tgtcttttttccactagatggttttgctcccttgtctaagatcaagtgac
cataggcttgttggttcatttctgggtcttcaattctattccattggttt
acttgtctgtcactataccagtaccatgcattttttatcaaaattgctct
gtagtacagctttaggttggccatggtgattcccctagaggttcttttat
cattgagaagagtttttgctatcctaggttttttgttattccagatgaat
ttggagattacgctttccaattcgttgaagaattgagttggaatttggat
ggggattgaattgaatatgtagattgcttttggcaagacagccattttta
ctatattgatcctgccagtccatgagcatgggagatctttcaatcttctg
agatctttaatttctatcttcagagaattgaagttcgtattatacagatc
tttcacttccttagttagagtcacgccaaggtatttatattatttatgac
tattgtgaacgtgttgtttccctaatttctttctcagctgtctatccttt
gtatagaagaaaggcattgactagtttgagtaattttatatccagctact
tcactgcagatgttattcagtttaggagttctcttggtgaaattagggtc
atttagggtttatcatagcttctgcaaaaatgaatggtggctcctccttg
cgacttcaccatgaatcctgtgtgaatgcttgcctgaactcagacatcag
tgatagacta
gaattcatttgtcagaaagagaccccataatctaatcatgtccccaaagt
gtctcttctgatcatttcattggttaccaatcattaagagcataaacacg
agccttaaggaatatgtcataattattagaaatgattttattctaatgct
acatattgatggccggctctgtccacgtagtctttgcattttagattttt
ttcaaatatacataataagctatcaagggataatacttttaccagtgaac
aaataaatatttcatacttagcactgacattttttaggctataactgatt
tttagatttacttaagatgaaacaattatagtgagatggctcagtgggta
agagcacccgactgctcttccgaaggtccagagttcaaatcccagcaacc
acatggtggttcacaaccatctgtaacaagatctgacactccctcttctg
gagtgtctgaaggcagctacagtgtacttacatataataaataaataaat
cttaaaaaaaaatatttacttcagaaacacaatttaaagcctacaatttt
tcagcctaattacagaaatattagaatatgttattttaattttgatatag
agttctgcccttatatggatcatcttctgagtgaaggcaatgagtttcac
aaacagatggaacacatttcttaatttctcattatgaatgctgcccagag
catttactttctctttgctttatccatttacattttataaatgtaaatcg
taggtactcatttaactttgagaactggcatgtgctttcccacagaggaa
ttatatcattacttactatccagttaaaatcatacataccagtcaaactc
cacacactggaagagagaccacggacgcttcatcagtctattttccaatt
cccacagcgggagcttta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_114449014_114449938
seq2: B6Ng01-150F01.g_66_983 (reverse)

seq1  TAAAGCTCCCGCTGTGGGGATTTGTGAAATATGACTGATGAGCTGTCCCG  50
      ||||||||||||||| |||| |||  ||||| |||||||||   || |||
seq2  TAAAGCTCCCGCTGT-GGGAATTGGAAAATA-GACTGATGAAGCGT-CCG  47

seq1  TGGTCCTCTCTT-CAGTGTGTTGAGTTTTGACTGGTATGGTATGATTTCT  99
      |||| ||||||| |||||||| ||| |||||||||||| ||||||||| |
seq2  TGGT-CTCTCTTCCAGTGTGTGGAG-TTTGACTGGTAT-GTATGATTT-T  93

seq1  AACTGGATAGTTAGTTAATGATATAATTTCTCTGTGGGAAAGCACATGCC  149
      ||||||||||| || ||||||||||||| |||||||||||||||||||||
seq2  AACTGGATAGTAAG-TAATGATATAATTCCTCTGTGGGAAAGCACATGCC  142

seq1  AGTTCTCAAAGTTAAATGAGTACCTACGATTTACATTTATAAAATGTAAA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTCAAAGTTAAATGAGTACCTACGATTTACATTTATAAAATGTAAA  192

seq1  TGGATAAAGCAAAGAGAAAGTAAATGCTCTGGGCAGCATTCATAATGAGA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATAAAGCAAAGAGAAAGTAAATGCTCTGGGCAGCATTCATAATGAGA  242

seq1  AATTAAGAAATGTGTTCCATCTGTTTGTGAAACTCATTGCCTTCACTCAG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAGAAATGTGTTCCATCTGTTTGTGAAACTCATTGCCTTCACTCAG  292

seq1  AAGATGATCCATATAAGGGCAGAACTCTATATCAAAATTAAAATAACATA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGATCCATATAAGGGCAGAACTCTATATCAAAATTAAAATAACATA  342

seq1  TTCTAATATTTCTGTAATTAGGCTGAAAAATTGTAGGCTTTAAATTGTGT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAATATTTCTGTAATTAGGCTGAAAAATTGTAGGCTTTAAATTGTGT  392

seq1  TTCTGAAGTAAATATTTTTTTTTAAGATTTATTTATTTATTATATGTAAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAAGTAAATATTTTTTTTTAAGATTTATTTATTTATTATATGTAAG  442

seq1  TACACTGTAGCTGCCTTCAGACACTCCAGAAGAGGGAGTGTCAGATCTTG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACTGTAGCTGCCTTCAGACACTCCAGAAGAGGGAGTGTCAGATCTTG  492

seq1  TTACAGATGGTTGTGAACCACCATGTGGTTGCTGGGATTTGAACTCTGGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGATGGTTGTGAACCACCATGTGGTTGCTGGGATTTGAACTCTGGA  542

seq1  CCTTCGGAAGAGCAGTCGGGTGCTCTTACCCACTGAGCCATCTCACTATA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCGGAAGAGCAGTCGGGTGCTCTTACCCACTGAGCCATCTCACTATA  592

seq1  ATTGTTTCATCTTAAGTAAATCTAAAAATCAGTTATAGCCTAAAAAATGT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTTCATCTTAAGTAAATCTAAAAATCAGTTATAGCCTAAAAAATGT  642

seq1  CAGTGCTAAGTATGAAATATTTATTTGTTCACTGGTAAAAGTATTATCCC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGCTAAGTATGAAATATTTATTTGTTCACTGGTAAAAGTATTATCCC  692

seq1  TTGATAGCTTATTATGTATATTTGAAAAAAATCTAAAATGCAAAGACTAC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATAGCTTATTATGTATATTTGAAAAAAATCTAAAATGCAAAGACTAC  742

seq1  GTGGACAGAGCCGGCCATCAATATGTAGCATTAGAATAAAATCATTTCTA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGACAGAGCCGGCCATCAATATGTAGCATTAGAATAAAATCATTTCTA  792

seq1  ATAATTATGACATATTCCTTAAGGCTCGTGTTTATGCTCTTAATGATTGG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTATGACATATTCCTTAAGGCTCGTGTTTATGCTCTTAATGATTGG  842

seq1  TAACCAATGAAATGATCAGAAGAGACACTTTGGGGACATGATTAGATTAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCAATGAAATGATCAGAAGAGACACTTTGGGGACATGATTAGATTAT  892

seq1  GGGGTCTCTTTCTGACAAATGAATTC  925
      ||||||||||||||||||||||||||
seq2  GGGGTCTCTTTCTGACAAATGAATTC  918