BAC Information

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BAC

Clone NameB6Ng01-150F05
Chromosome3 (Build37)
Map Location 95,158,915 - 95,303,562
singlet/doubletdoublet
Overlap geneSetdb1, LOC100043294, 4930558C23Rik, LOC277589, LOC668448, LOC100043305, Arnt, Ctsk
Upstream geneGm659, Rorc, Lingo4, Tdrkh, Oaz3, Mrpl9, LOC668403, 2310007A19Rik, Tnrc4, Snx27, LOC100043228, EG668409, Tuft1, LOC100042793, BC021767, Selenbp2, LOC100042801, Cgn, Pogz, Psmb4, Selenbp1, Rfx5, Pik4cb, Zfp687, Psmd4, Pip5k1a, Vps72, Tmod4, Scnm1, Lysmd1, Tnfaip8l2, LOC668436, Sema6c, Gabpb2, Mllt11, Cdc42se1, Gm128, Bnipl, Prune, 4930504E06Rik, Anxa9, Lass2
Downstream geneCtss, LOC100043312, Hormad1, Golph3l, EG668457, Ensa, Mcl1, Adamtsl4, Ecm1, Tars2, 4930535B03Rik, LOC100043327, Prpf3, Mrps21, LOC100042889, Gm129, BC028528, Aph1a, Car14, Anp32e, LOC100042897, LOC100042898, EG668224, Plekho1, EG668222, Vps45, LOC100042908, Otud7b, Mtmr11, Sf3b4, Sv2a, Bola1, Hist2h2ab, Hist2h2ac, Hist2h2be, Hist2h3c2, Hist2h2aa1, Hist2h3c1, LOC100043378, Hist2h4, Hist2h3b, Hist2h2bb, Fcgr1, Pafah1b1-ps1, Terc, BC107364, LOC668500
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-150F05.bB6Ng01-150F05.g
ACCDH946433DH946434
length5931,115
definitionDH946433|Mus musculus domesticus DNA, BAC clone: B6Ng01-150F05, 5' end.DH946434|Mus musculus domesticus DNA, BAC clone: B6Ng01-150F05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(95,302,964 - 95,303,562)(95,158,915 - 95,160,052)
sequence
ttcttcttccccaggagttggttaactcttaagttaaacagaactcagaa
agagcccacgcttgagacaggcttacagaatcctcttcctctgattatac
caacagccacatattcattcacatagaaaatcctaaagatttccatacac
atttagctagaaaataaactaaggattatgttgttattcagggaacttaa
attatttgatccccaattcattatatcctttctcttcttaaaataaggtt
aattggtaggaacaagacgctaaaagatccagaagttaaaaatgttacct
gctgttgagaatctgttcgctaggctcttttcggataggaagcgtggcta
ctgtgagcggaagactaagggtgctagatttattcggtaaggattgcgga
agtcaactccagcagtggctggaaaatctggataagggagggagtcaggg
ataggatgaaaaggaggaggggttagggaggaaggacacacatttgcaca
atgtgtgtatacagtatcatatgccagtgtggatagctgctaagtgttta
gtttcatctgactgactttggggggcaaaaataagatagcaca
gaattccaggccaatttggtgtacagaggtagttccaggacagccagagt
tacaaagaaacggtctcaaaaataaaacaaaacaaaaacagaaacaaaaa
caaaaaacaaccccccccacatacaaaacacaacacagtaacaggaaatt
atgtatatttaaatatagactgtttgctctacatgttccaaagtacctat
ttagaatgcttttccacagaatgtttgtttccatgtaattcttctatgaa
acaattttctagacttcaattttccacctgctgttacaaaagtcctaata
tctgatatttattatctatgtggctttgggaactaagaagacagctttaa
atatcaacttcattttgctgggtgctgtgaaacatccctttaatctcacc
actggagaaacaaaggcagatgggtctctatgagtccagctcaatatggt
ttatatggtgagttctagggcagccaattctacgtaaagagactttgtat
caaaaatggatgaacgaatgaaaccccaatcaactcaacaagcataagct
aggatcatttcattgcagctcttaggaggcaaaagtcggcagatctctgc
aagttgcaggccagcaagatttaggtattgggattctgtctcagaaaaac
agaaaagacagcaactctacaatcttcactttctggggatcttaggaagg
aagttcagtccaggaggaagagaagggaattcaagcctttaacctaacta
ctgctgatcacatagcagctacccacagggaaaaagtgttctgttgcaac
tctgcattacaaactcagaggaagagtaaggccccacctgactgaagtcg
ccaaagtataaagtgcttaggacatgaaacaacagtcactccaggaggac
acagatggacatttacttctgcttctggaatcctacctggatgcatcatc
aaacagccgatcaacatagcactcagactctttctgagtaccacgtctca
gctctgcgagctgcttcttgcgctgctgatgcagtcatctttcaggtctc
atcatgtactgacgagtctcaagagaaacccgctctttcaaccaccgctg
ctgcagctcagcaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_95302964_95303562
seq2: B6Ng01-150F05.b_44_642 (reverse)

seq1  TGTGCTATCTTATTTTTGCCCCCCAAAGTCAGTCAGATGAAACTAAACAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTATCTTATTTTTGCCCCCCAAAGTCAGTCAGATGAAACTAAACAC  50

seq1  TTAGCAGCTATCCACACTGGCATATGATACTGTATACACACATTGTGCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCAGCTATCCACACTGGCATATGATACTGTATACACACATTGTGCAA  100

seq1  ATGTGTGTCCTTCCTCCCTAACCCCTCCTCCTTTTCATCCTATCCCTGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTGTCCTTCCTCCCTAACCCCTCCTCCTTTTCATCCTATCCCTGAC  150

seq1  TCCCTCCCTTATCCAGATTTTCCAGCCACTGCTGGAGTTGACTTCCGCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCCCTTATCCAGATTTTCCAGCCACTGCTGGAGTTGACTTCCGCAA  200

seq1  TCCTTACCGAATAAATCTAGCACCCTTAGTCTTCCGCTCACAGTAGCCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTACCGAATAAATCTAGCACCCTTAGTCTTCCGCTCACAGTAGCCAC  250

seq1  GCTTCCTATCCGAAAAGAGCCTAGCGAACAGATTCTCAACAGCAGGTAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCTATCCGAAAAGAGCCTAGCGAACAGATTCTCAACAGCAGGTAAC  300

seq1  ATTTTTAACTTCTGGATCTTTTAGCGTCTTGTTCCTACCAATTAACCTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTAACTTCTGGATCTTTTAGCGTCTTGTTCCTACCAATTAACCTTA  350

seq1  TTTTAAGAAGAGAAAGGATATAATGAATTGGGGATCAAATAATTTAAGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAGAAGAGAAAGGATATAATGAATTGGGGATCAAATAATTTAAGTT  400

seq1  CCCTGAATAACAACATAATCCTTAGTTTATTTTCTAGCTAAATGTGTATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGAATAACAACATAATCCTTAGTTTATTTTCTAGCTAAATGTGTATG  450

seq1  GAAATCTTTAGGATTTTCTATGTGAATGAATATGTGGCTGTTGGTATAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCTTTAGGATTTTCTATGTGAATGAATATGTGGCTGTTGGTATAAT  500

seq1  CAGAGGAAGAGGATTCTGTAAGCCTGTCTCAAGCGTGGGCTCTTTCTGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGAAGAGGATTCTGTAAGCCTGTCTCAAGCGTGGGCTCTTTCTGAG  550

seq1  TTCTGTTTAACTTAAGAGTTAACCAACTCCTGGGGAAGAAGAAGAATTC  599
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTTTAACTTAAGAGTTAACCAACTCCTGGGGAAGAAGAAGAATTC  599

seq1: chr3_95158915_95160052
seq2: B6Ng01-150F05.g_67_1181

seq1  GAATTCCAGGCCAATTTGGTGTACAGAGGTAGTTCCAGGACAGCCAGAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGCCAATTTGGTGTACAGAGGTAGTTCCAGGACAGCCAGAGT  50

seq1  TACAAAGAAACGGTCTCAAAAATAAAACAAAACAAAAACAGAAACAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAGAAACGGTCTCAAAAATAAAACAAAACAAAAACAGAAACAAAAA  100

seq1  CAAAAAACAACCCCCCCCACATACAAAACACAACACAGTAACAGGAAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAACAACCCCCCCCACATACAAAACACAACACAGTAACAGGAAATT  150

seq1  ATGTATATTTAAATATAGACTGTTTGCTCTACATGTTCCAAAGTACCTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATATTTAAATATAGACTGTTTGCTCTACATGTTCCAAAGTACCTAT  200

seq1  TTAGAATGCTTTTCCACAGAATGTTTGTTTCCATGTAATTCTTCTATGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAATGCTTTTCCACAGAATGTTTGTTTCCATGTAATTCTTCTATGAA  250

seq1  ACAATTTTCTAGACTTCAATTTTCCACCTGCTGTTACAAAAGTCCTAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTTTCTAGACTTCAATTTTCCACCTGCTGTTACAAAAGTCCTAATA  300

seq1  TCTGATATTTATTATCTATGTGGCTTTGGGAACTAAGAAGACAGCTTTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATATTTATTATCTATGTGGCTTTGGGAACTAAGAAGACAGCTTTAA  350

seq1  ATATCAACTTCATTTTGCTGGGTGCTGTGAAACATCCCTTTAATCTCACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCAACTTCATTTTGCTGGGTGCTGTGAAACATCCCTTTAATCTCACC  400

seq1  ACTGGAGAAACAAAGGCAGATGGGTCTCTATGAGTCCAGCTCAATATGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGAGAAACAAAGGCAGATGGGTCTCTATGAGTCCAGCTCAATATGGT  450

seq1  TTATATGGTGAGTTCTAGGGCAGCCAATTCTACGTAAAGAGACTTTGTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATGGTGAGTTCTAGGGCAGCCAATTCTACGTAAAGAGACTTTGTAT  500

seq1  CAAAAATGGATGAACGAATGAAACCCCAATCAACTCAACAAGCATAAGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAATGGATGAACGAATGAAACCCCAATCAACTCAACAAGCATAAGCT  550

seq1  AGGATCATTTCATTGCAGCTCTTAGGAGGCAAAAGTCGGCAGATCTCTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATCATTTCATTGCAGCTCTTAGGAGGCAAAAGTCGGCAGATCTCTGC  600

seq1  AAGTTGCAGGCCAGCAAGATTTAGGTATTGGGATTCTGTCTCAGAAAAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGCAGGCCAGCAAGATTTAGGTATTGGGATTCTGTCTCAGAAAAAC  650

seq1  AGAAAAGACAGCAACTCTACAATCTTCACTTTCTGGGGATCTTAGGAAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGACAGCAACTCTACAATCTTCACTTTCTGGGGATCTTAGGAAGG  700

seq1  AAGTTCAGTCCAGGAGGAAGAGAAGGGAATTCAAGCCTTTAACCTAACTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCAGTCCAGGAGGAAGAGAAGGGAATTCAAGCCTTTAACCTAACTA  750

seq1  CTGCTGATCACATAGCAGCTACCCACAGGGAAAAAGTGTTCTGTTGCAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGATCACATAGCAGCTACCCACAGGGAAAAAGTGTTCTGTTGCAAC  800

seq1  TCTGCATTACAAACTCAGAGGAAGAGTAAGGCCCCACCTGACTGAAGTCG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCATTACAAACTCAGAGGAAGAGTAAGGCCCCACCTGACTGAAGTCG  850

seq1  CCAAAGTATAAAGTGCTTAGGACAATGACAACAACAGTCACTCCAAGGAG  900
      ||||||||||||||||||||||| |||| ||||||||||||||| |||||
seq2  CCAAAGTATAAAGTGCTTAGGAC-ATGA-AACAACAGTCACTCC-AGGAG  897

seq1  GACACAGATGGACATTTACTTCTGCTTCCTGGAATCCCTACCTGGATGCA  950
      ||||||||||||||||||||||||||| ||||||| ||||||||||||||
seq2  GACACAGATGGACATTTACTTCTGCTT-CTGGAAT-CCTACCTGGATGCA  945

seq1  TCATCAAACAGCCGATCAACATAAGCCACTTCAGACTCTTTCTGTAGTAC  1000
      |||||||||||||||||||||||   ||| |||||||||||||| |||| 
seq2  TCATCAAACAGCCGATCAACATA--GCAC-TCAGACTCTTTCTG-AGTA-  990

seq1  CCACGTCTCCAGCTCTGCGAGCTGCTTCTTGCGCTGCTGTATGCAGTCCA  1050
      |||||||| |||||||||||||||||||||||||||||| ||||||| ||
seq2  CCACGTCT-CAGCTCTGCGAGCTGCTTCTTGCGCTGCTG-ATGCAGT-CA  1037

seq1  TCTTTTCCAGTTCCTCATCAATGTACTGACGAAGTTCCTCCATAGAGATA  1100
      |||||  ||| | |||||| ||||||||||| |||  |||   ||||| |
seq2  TCTTT--CAGGT-CTCATC-ATGTACTGACG-AGT--CTC--AAGAGAAA  1078

seq1  CCCAGCTC-TTCAACCACCGCCTGCTGCAGCTCAGCAAT  1138
      ||| |||| ||||||||||| ||||||||||||||||||
seq2  CCC-GCTCTTTCAACCACCG-CTGCTGCAGCTCAGCAAT  1115