BAC Information

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BAC

Clone NameB6Ng01-150G20
Chromosome4 (Build37)3 (Build37)
Map Location 30,449,847 - 30,450,86141,059,227 - 41,059,737
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC665185
Downstream geneLOC619906, LOC100040864, LOC100040891
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-150G20.bB6Ng01-150G20.g
ACCDH946509DH946510
length1,016981
definitionDH946509|Mus musculus domesticus DNA, BAC clone: B6Ng01-150G20, 5' end.DH946510|Mus musculus domesticus DNA, BAC clone: B6Ng01-150G20, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(30,449,847 - 30,450,861)(41,059,227 - 41,059,737)
sequence
gaattctggaaaaacttaagttttcctttcttagtttatttttctgtcac
tactggtagtgtacacatttaaatggatctcaatggaatagaaagtacat
aaacaagtcagtaaaagttgaatgaatgtggaatactaaactgctgttgt
actcacctgcagatatcattgtagagtgctagagactacactgtgcacat
aagtatagatctgtatttctaatactgtattcttagaaactaatatatac
tctaccatgatatacttttccatactaatactgtccactatttcaacctg
tattctcatacattaatccaaactgaattactacccagtcagtattctag
acttgattattatctattaccctaatctatattattgttcacctttcctt
gctgtaatactgaatattacttcagaatatattagtttacagtattccat
actatactattagttcacattgtattaaagtacattactccagaatatgc
attccattggaatggtatgaaatattgctatgaactgtattattctacac
tactacaaactattattttaaatgagtattgatcactctatatattgagc
ccaataaaatcattaaaataattttacttccttagtaatatctttccaac
tgtttactttttatgaatgtttagttctttttaatattttttatttgtag
cattcatttaaaatacgctgcatagccagacaaaatatatattaattctt
tacatcattattttccctggcagttgcaacacttggaaaagctggcactc
cccgcccccaactgggacgcacaagagagaaaggccctggtggagtcagg
gcaggatatctggcactggggtcatggctgtggaagagctggccctgatc
ttattagtatactgtgtgatacaccatgaacactatagtttccagagaga
taatttttaattatttttattttcattttattttgagggggagtttagga
gggtagaggatggatt
gaattctttgtttagctctgagccccatttttaatggggttatatgaatt
tctggagtccaccttcttgagatctttatatatattggatattagtcccg
tatctgatttaggattggtaaagatcctttcccaatctgttggtggcctt
tttgtcttattgacagtgtcttttgccttacagaagctttgcaattttat
gaggtcccatttgtgaaattctcaatcttactgcacaagccattgctgtt
ctattcaggaattttaccatgtccatatcttcgaggattttccccacttt
ttcctctataagttttactgtctctggttttatgtggagttccttgatcc
acttagatttgaccttagtacaaggagataggaatggatcaatttgcatt
cttctacatgataaccgccagttgtgacagcaccatttcttgaaaatgct
gtcatttttccactggatggttttagctcctttgtcaaagaacaagtgac
cataggtgtgaatgtttgtatatccttggaccaggaagtggcaccatctg
aaggtgtggccttgttggaataggtgtgacctggttggaatgggtgtgtc
actgtgagtgtgggtataagagcctcaccctacttgactgggagtcagtc
ttccactagctgtctttggatgaagacatagaactccattcagtggtttg
aaacaactattattagtagtaaatttatacactgcattttattttagtat
ttgaaattgttattactagcaaccaaacaaaactagttaacattaagaga
tagctgttccacctaggtgaagaaagaaaaaagtttcttgtttgctttat
caagttgacttaagagaagagagaatatatttcttgaatgtatatgaaat
gttcagcaaatcaccacagaatatggttgctgtttacagcaatttcatac
ataatcatcagttttgtattttaggctgcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_30449847_30450861
seq2: B6Ng01-150G20.b_43_1058

seq1  GAATTCTGGAAAAACTTAAGTTTTCCTTTCTTAGTTTATTTTTCTGTCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGAAAAACTTAAGTTTTCCTTTCTTAGTTTATTTTTCTGTCAC  50

seq1  TACTGGTAGTGTACACATTTAAATGGATCTCAATGGAATAGAAAGTACAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGGTAGTGTACACATTTAAATGGATCTCAATGGAATAGAAAGTACAT  100

seq1  AAACAAGTCAGTAAAAGTTGAATGAATGTGGAATACTAAACTGCTGTTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAGTCAGTAAAAGTTGAATGAATGTGGAATACTAAACTGCTGTTGT  150

seq1  ACTCACCTGCAGATATCATTGTAGAGTGCTAGAGACTACACTGTGCACAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACCTGCAGATATCATTGTAGAGTGCTAGAGACTACACTGTGCACAT  200

seq1  AAGTATAGATCTGTATTTCTAATACTGTATTCTTAGAAACTAATATATAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATAGATCTGTATTTCTAATACTGTATTCTTAGAAACTAATATATAC  250

seq1  TCTACCATGATATACTTTTCCATACTAATACTGTCCACTATTTCAACCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACCATGATATACTTTTCCATACTAATACTGTCCACTATTTCAACCTG  300

seq1  TATTCTCATACATTAATCCAAACTGAATTACTACCCAGTCAGTATTCTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTCATACATTAATCCAAACTGAATTACTACCCAGTCAGTATTCTAG  350

seq1  ACTTGATTATTATCTATTACCCTAATCTATATTATTGTTCACCTTTCCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGATTATTATCTATTACCCTAATCTATATTATTGTTCACCTTTCCTT  400

seq1  GCTGTAATACTGAATATTACTTCAGAATATATTAGTTTACAGTATTCCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTAATACTGAATATTACTTCAGAATATATTAGTTTACAGTATTCCAT  450

seq1  ACTATACTATTAGTTCACATTGTATTAAAGTACATTACTCCAGAATATGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATACTATTAGTTCACATTGTATTAAAGTACATTACTCCAGAATATGC  500

seq1  ATTCCATTGGAATGGTATGAAATATTGCTATGAACTGTATTATTCTACAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCATTGGAATGGTATGAAATATTGCTATGAACTGTATTATTCTACAC  550

seq1  TACTACAAACTATTATTTTAAATGAGTATTGATCACTCTATATATTGAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTACAAACTATTATTTTAAATGAGTATTGATCACTCTATATATTGAGC  600

seq1  CCAATAAAATCATTAAAATAATTTTACTTCCTTAGTAATATCTTTCCAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATAAAATCATTAAAATAATTTTACTTCCTTAGTAATATCTTTCCAAC  650

seq1  TGTTTACTTTTTATGAATGTTTAGTTCTTTTTAATATTTTTTATTTGTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTACTTTTTATGAATGTTTAGTTCTTTTTAATATTTTTTATTTGTAG  700

seq1  CATTCATTTAAAATACGCTGCATAGCCAGACAAAATATATATTAATTCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCATTTAAAATACGCTGCATAGCCAGACAAAATATATATTAATTCTT  750

seq1  TACATCATTATTTTCCCTGGCAGTTGCAACACTTGGAAAAGCTGGCACTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATCATTATTTTCCCTGGCAGTTGCAACACTTGGAAAAGCTGGCACTC  800

seq1  CCCGCCCCCAACTGGGACGCACAAGAGAG-AAGGCCCTGGTGGAGTCAGG  849
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CCCGCCCCCAACTGGGACGCACAAGAGAGAAAGGCCCTGGTGGAGTCAGG  850

seq1  GCAGGATATCTGGCACTGGGGTCATGGCTGTGGAAGAGCTGGCCCTGATC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGATATCTGGCACTGGGGTCATGGCTGTGGAAGAGCTGGCCCTGATC  900

seq1  TTATTAGTATACTGTGTGATACACCATGAACACTATAGTTTCCAGAGAGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAGTATACTGTGTGATACACCATGAACACTATAGTTTCCAGAGAGA  950

seq1  TAATTTTTAATTATTTTTATTTTCATTTTATTTTGAGGGGGAGTTTAGGA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTTTAATTATTTTTATTTTCATTTTATTTTGAGGGGGAGTTTAGGA  1000

seq1  GGGTAGAGGATGGATT  1015
      ||||||||||||||||
seq2  GGGTAGAGGATGGATT  1016

seq1: chr3_41059227_41059737
seq2: B6Ng01-150G20.g_66_574 (reverse)

seq1  CACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCAGTG  50
      |||||||||||||||||| |||| ||||| ||||||||||||||||||||
seq2  CACACCTATGGTCACTTGTTCTTTGACAAAGGAGCTAAAACCATCCAGTG  50

seq1  GAAAAAAGACAGCATTTTCAACAAATGGTGCTGGCACAACTGGTTGTTAT  100
      |||||| |||||||||||||| ||||||||||| |||||||||  |||||
seq2  GAAAAATGACAGCATTTTCAAGAAATGGTGCTGTCACAACTGGCGGTTAT  100

seq1  CATGTAGAAGAATGCGAATTGATCCACTCCTATCTCCTTGTACTAAGGTC  150
      ||||||||||||||| |||||||||| |||||||||||||||||||||||
seq2  CATGTAGAAGAATGCAAATTGATCCATTCCTATCTCCTTGTACTAAGGTC  150

seq1  AAATCTAAGTGGATCAAGGAACGCCACATAAAACCAGAGACACTGAAACT  200
      |||||||||||||||||||||| ||||||||||||||||||| | |||||
seq2  AAATCTAAGTGGATCAAGGAACTCCACATAAAACCAGAGACAGTAAAACT  200

seq1  TATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGTCACAGGGGAAA  250
      ||||||||| ||||||||||||| ||| |||||||||| ||    || ||
seq2  TATAGAGGAAAAAGTGGGGAAAATCCTCGAAGATATGGACA---TGGTAA  247

seq1  AATTCCTGCATAGAACAGCAATGGCTTGTGCTGTAAGATTGAGAA-TAGA  299
      |||||||| |||||||||||||||||||||| ||||||||||||| |  |
seq2  AATTCCTGAATAGAACAGCAATGGCTTGTGCAGTAAGATTGAGAATTTCA  297

seq1  CAAATGGGACCTCATGAAACTGCAAAGCTTCTGCAAGGCAAAAGACACCG  349
      ||||||||||||||| ||| ||||||||||||| |||||||||||||| |
seq2  CAAATGGGACCTCATAAAATTGCAAAGCTTCTGTAAGGCAAAAGACACTG  347

seq1  TCAATAAGACAAAAAGG-CACCAACAGATTGGGAAAGGATCTTTACCTAT  398
      ||||||||||||||||| ||||||||||||||||||||||||||||| ||
seq2  TCAATAAGACAAAAAGGCCACCAACAGATTGGGAAAGGATCTTTACCAAT  397

seq1  CCTAAATCAGATAGGGGACTAATATCCAATATATATCAAGAACTCAAGAA  448
      ||||||||||||| |||||||||||||||||||||| |||| ||||||||
seq2  CCTAAATCAGATACGGGACTAATATCCAATATATATAAAGATCTCAAGAA  447

seq1  GGTGGATTCCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCAGAGC  498
      |||||| |||||||| ||| ||||||||||| ||||||||||||||||||
seq2  GGTGGACTCCAGAAATTCATATAACCCCATT-AAAAATGGGGCTCAGAGC  496

seq1  TAAACAAAGAATT  511
      |||||||||||||
seq2  TAAACAAAGAATT  509