BAC Information

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BAC

Clone NameB6Ng01-150N04
Chromosome3 (Build37)
Map Location 132,305,906 - 132,434,216
singlet/doubletdoublet
Overlap geneEG433653, LOC668857, Scye1, A630047E20Rik
Upstream genePapss1, Olfr375-ps1, Dkk2, LOC100039018
Downstream geneLOC668858, Npnt, Gstcd, Ints12, 9130221D24Rik, Ppa2, E130014J05Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-150N04.bB6Ng01-150N04.g
ACCDH946802DH946803
length5511,126
definitionDH946802|Mus musculus domesticus DNA, BAC clone: B6Ng01-150N04, 5' end.DH946803|Mus musculus domesticus DNA, BAC clone: B6Ng01-150N04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(132,305,906 - 132,306,460)(132,433,072 - 132,434,216)
sequence
ccaatgttcatttgaaaccttctcatgataatgcagacacagagaatgta
ccttcaaagaagtcagtgctaagtttcagtgtcatttgcctaaataaatg
gctctggtgagagcctggctgcactcatggtaggcaaagattcatgttga
gcatcaaaaagttatacatggccaagcatggtgggtgcctgcctctaacc
cagcactaaggaggcaaaaccagggttgatatgtttgagatcagctaggg
gaacagagtaagaatctttctcaaaggactcaaactaaaacacatcaaac
tgaaatgggggagtgggagaggagatgggagatgaaaagagattgccgac
ttataagagctttatatctaacaccagttctttatttttgtttgtttgct
tctgactactagaagtccttgctaactcctgctatattcattcatagaca
ttctgtactttaaaaacagtgttacgaaccggcaacaccattgtaagtat
ttcggtccccagacacatctagaaggaagaaaatgttacttttgctgtca
c
gaattcctacagggccaatattttctgttcccaacacaactgtgaagaga
agagtactaatactgtctaagtgtggatgtaagtgtaaacactatttctc
catgctaacagaaaaggttacctactacccgtttactgagttcttgacta
tccaaggtggattactagtctttacaaagataattaatggctcagaaatt
atggagtttgctcaaaatttggagtgagcgtcttaactagatctagagag
ctacattcttgaacaaagttttaaaaattttaaaccagacacaaattaat
aaagaataaatccaaattaaaaaataagagccatcagatattagcactct
gtaataaggccaagctctttaaaggaaaatgataagagctagactataat
ttatgtttatcaatatcaactatataattaacaataatttgaaaagcaga
aaatgtaatatttgtttcttgtgatagagaaacaaataaaaaggaatgga
acaacaattatctagatattagacttgacaggtaagggtagtaatgcaat
tgtgactatgtcaagggttaaaaggagaatgtactcaaggtaacttgata
catgtaaaacagaagaaagaagaggaggaaggaagagcagccagctgtga
gaaggctagttagacactacagacccagagaaatgaccagcacataattc
aaaaggtaaatgggaagccaataaagtattaggatgattaaaactttatt
agctaactgttttgtgcatgctggccacactcctgtacatgtctgcattc
tcagtccaggctcctgtacttgggatcctctcactagcagagaccttttt
agggcaagtctgagttacctgtgcagaagaatagagactcccttccactc
tgacccaacgcatttctattttagccctttctattaaacccctgtctgtc
cttcagttcctacatcagaggaccatttgctaagtgacagcgcttgcagc
atctgagccctggctctgctcatccatccgccccttgcctggtcttcctc
atatggagcttcagcatgggagagacgctattcagtatgataagtgacct
catttcgattggtgctgtgctagaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_132305906_132306460
seq2: B6Ng01-150N04.b_45_601

seq1  GAATTCCCAATGTTCATTTGAAACCTTCTCATGATAATGCAGACACAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCAATGTTCATTTGAAACCTTCTCATGATAATGCAGACACAGAG  50

seq1  AATGTACCTTCAAAGAAGTCAGTGCTAAGTTTCAGTGTCATTTGCCTAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTACCTTCAAAGAAGTCAGTGCTAAGTTTCAGTGTCATTTGCCTAAA  100

seq1  TAAATGGCTCTGGTGAGAGCCTGGCTGCACTCATGGTAGGCAAAGATTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGGCTCTGGTGAGAGCCTGGCTGCACTCATGGTAGGCAAAGATTCA  150

seq1  TGTTGAGCATCAAAAAGTTATACATGGCCAAGCATGGTGGGTGCCTGCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGAGCATCAAAAAGTTATACATGGCCAAGCATGGTGGGTGCCTGCCT  200

seq1  CTAACCCAGCACTAAGGAGGCAAAACCAGGGTTGATATGTTTGAGATCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACCCAGCACTAAGGAGGCAAAACCAGGGTTGATATGTTTGAGATCAG  250

seq1  CTAGGGGAACAGAGTAAGAATCTTTCTCAAAGGACTCAAACTAAAACACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGGGAACAGAGTAAGAATCTTTCTCAAAGGACTCAAACTAAAACACA  300

seq1  TCAAACTGAAATGGGGGAGTGGGAGAGGAGATGGGAGATGAAAAGAGATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACTGAAATGGGGGAGTGGGAGAGGAGATGGGAGATGAAAAGAGATT  350

seq1  GCCGACTTATAAGAGCTTTATATCTAACACCAGTTCTTTATTTTTGTTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGACTTATAAGAGCTTTATATCTAACACCAGTTCTTTATTTTTGTTTG  400

seq1  TTTGCTTCTGACTACTAGAAGTCCTTGCTAACTCCTGCTATATTCATTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTTCTGACTACTAGAAGTCCTTGCTAACTCCTGCTATATTCATTCA  450

seq1  TAGACATTCTGTACTTTAAAAACAGTGTTACGAACCGGCAACACCATTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACATTCTGTACTTTAAAAACAGTGTTACGAACCGGCAACACCATTGT  500

seq1  AAGTATTTCGGT-CCCAGACACATCTAGAAGGAAGAAAATGTTAC-TTTG  548
      |||||||||||| |||||||||||||||||||||||||||||||| ||||
seq2  AAGTATTTCGGTCCCCAGACACATCTAGAAGGAAGAAAATGTTACTTTTG  550

seq1  CTGTCAC  555
      |||||||
seq2  CTGTCAC  557

seq1: chr3_132433072_132434216
seq2: B6Ng01-150N04.g_66_1191 (reverse)

seq1  ATTCTAGCAACAGCACCATCTGAAAATGATGTCAACCTTTAATCATTACT  50
      |||||||| |||||||||  |  |||||| ||||  |||  |||| ||||
seq2  ATTCTAGC-ACAGCACCA-ATCGAAATGAGGTCA--CTT--ATCA-TACT  43

seq1  GAAATAGCGTCTCTCCCATGCTGAAGGCTTCCATATGGAGAAGGACCAGG  100
      | ||||||||||||||||||||||||   ||||||| ||| | |||||||
seq2  G-AATAGCGTCTCTCCCATGCTGAAG--CTCCATAT-GAGGAAGACCAGG  89

seq1  CAAGGGGCGGATGGATGAGCAGAGCCAGGGGCTTCAGATGCTGCCAAGCG  150
      ||||||||||||||||||||||||||||||   |||||||||| ||||||
seq2  CAAGGGGCGGATGGATGAGCAGAGCCAGGG--CTCAGATGCTG-CAAGCG  136

seq1  CTGTCACTTAGCAAATGGTCCTCTTGATGTTAGGAACCTGAAGGACAGAC  200
      ||||||||||||||||||||||| ||||| |||||| |||||||||||||
seq2  CTGTCACTTAGCAAATGGTCCTC-TGATG-TAGGAA-CTGAAGGACAGAC  183

seq1  AGGGGTTTAATAGAAAGGGCTAAAAATAGAAATGCGTTGGGTCAGAGTGG  250
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AGGGGTTTAATAGAAAGGGCT-AAAATAGAAATGCGTTGGGTCAGAGTGG  232

seq1  AAGGGAGTCTCTATTCTTCTGCACAGGTAACCTCAGACTTGCCCTAAAAA  300
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  AAGGGAGTCTCTATTCTTCTGCACAGGTAA-CTCAGACTTGCCCTAAAAA  281

seq1  GGTCTCTGCTAGTGAGAGGATCCCAAGTACAGGAGCCTGGACTGAGAATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTCTGCTAGTGAGAGGATCCCAAGTACAGGAGCCTGGACTGAGAATG  331

seq1  CAGACATGTACAGGAGTGTGGCCAGCATGCACAAAACAGTTAGCTAATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACATGTACAGGAGTGTGGCCAGCATGCACAAAACAGTTAGCTAATAA  381

seq1  AGTTTTAATCATCCTAATACTTTATTGGCTTCCCATTTACCTTTTGAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTAATCATCCTAATACTTTATTGGCTTCCCATTTACCTTTTGAATT  431

seq1  ATGTGCTGGTCATTTCTCTGGGTCTGTAGTGTCTAACTAGCCTTCTCACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCTGGTCATTTCTCTGGGTCTGTAGTGTCTAACTAGCCTTCTCACA  481

seq1  GCTGGCTGCTCTTCCTTCCTCCTCTTCTTTCTTCTGTTTTACATGTATCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGCTGCTCTTCCTTCCTCCTCTTCTTTCTTCTGTTTTACATGTATCA  531

seq1  AGTTACCTTGAGTACATTCTCCTTTTAACCCTTGACATAGTCACAATTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTACCTTGAGTACATTCTCCTTTTAACCCTTGACATAGTCACAATTGC  581

seq1  ATTACTACCCTTACCTGTCAAGTCTAATATCTAGATAATTGTTGTTCCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTACCCTTACCTGTCAAGTCTAATATCTAGATAATTGTTGTTCCAT  631

seq1  TCCTTTTTATTTGTTTCTCTATCACAAGAAACAAATATTACATTTTCTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTTTATTTGTTTCTCTATCACAAGAAACAAATATTACATTTTCTGC  681

seq1  TTTTCAAATTATTGTTAATTATATAGTTGATATTGATAAACATAAATTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAAATTATTGTTAATTATATAGTTGATATTGATAAACATAAATTAT  731

seq1  AGTCTAGCTCTTATCATTTTCCTTTAAAGAGCTTGGCCTTATTACAGAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTAGCTCTTATCATTTTCCTTTAAAGAGCTTGGCCTTATTACAGAGT  781

seq1  GCTAATATCTGATGGCTCTTATTTTTTAATTTGGATTTATTCTTTATTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAATATCTGATGGCTCTTATTTTTTAATTTGGATTTATTCTTTATTAA  831

seq1  TTTGTGTCTGGTTTAAAATTTTTAAAACTTTGTTCAAGAATGTAGCTCTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGTCTGGTTTAAAATTTTTAAAACTTTGTTCAAGAATGTAGCTCTC  881

seq1  TAGATCTAGTTAAGACGCTCACTCCAAATTTTGAGCAAACTCCATAATTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATCTAGTTAAGACGCTCACTCCAAATTTTGAGCAAACTCCATAATTT  931

seq1  CTGAGCCATTAATTATCTTTGTAAAGACTAGTAATCCACCTTGGATAGTC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCCATTAATTATCTTTGTAAAGACTAGTAATCCACCTTGGATAGTC  981

seq1  AAGAACTCAGTAAACGGGTAGTAGGTAACCTTTTCTGTTAGCATGGAGAA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACTCAGTAAACGGGTAGTAGGTAACCTTTTCTGTTAGCATGGAGAA  1031

seq1  ATAGTGTTTACACTTACATCCACACTTAGACAGTATTAGTACTCTTCTCT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGTTTACACTTACATCCACACTTAGACAGTATTAGTACTCTTCTCT  1081

seq1  TCACAGTTGTGTTGGGAACAGAAAATATTGGCCCTGTAGGAATTC  1145
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGTTGTGTTGGGAACAGAAAATATTGGCCCTGTAGGAATTC  1126