BAC Information

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BAC

Clone NameB6Ng01-150N08
Chromosome3 (Build37)
Map Location 79,442,395 - 79,442,946
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC383883, LOC100041748, LOC100041716, LOC100041725, LOC100041766, Rapgef2, LOC100041741, LOC100041793, LOC667613, Ppid, Etfdh, 4930579G24Rik
Downstream geneRxfp1, Tmem144, 1110032E23Rik, EG626797
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-150N08.bB6Ng01-150N08.g
ACCDH946810DH946811
length1,1231,046
definitionDH946810|Mus musculus domesticus DNA, BAC clone: B6Ng01-150N08, 5' end.DH946811|Mus musculus domesticus DNA, BAC clone: B6Ng01-150N08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctactgaattccaagtttgtcagcttcaaggattttctaggatg
ttggaacattggcaaaggcttagctatgtcagaattcaatctttaaaggc
acttataataaaataatactaaaagagagcacatggatccatacaccaga
ctaatgtgggagtagggtatgagtatacaggttatgagaatgcctggttt
caggaggttgagtttccttgaaattccctgcctcgtgagtgcttccagtc
ctctcagcctgccaagcagacttcactggagtgtgtgtagcatggtggtt
tagtctctgggagctttgagggtactggttagttctattgttgttcctcc
tatgggactgcaaaccccttgagctccttgggtctttctgtatctcacta
tcagggacctggtgctcagtctaatggttgtctgagagcatccacctctg
tatttgtcagactctggtagagtctctcaggagacagctatatcaggtac
tgtctacaatcacttgttggcatccacaatagtatctgggtttggtgact
gtatatgggatggatcccaaggtggggcagtctctgggtgtccttccctt
cagtctctgctctacattttgtctctgtatctcctcccatgggcatattg
tttctccgtctaagaatgaccaaactaccacacttaggtcttccttcttt
cttgagtttcatgtggtctgtaaatttgtatcttgggtattctgagcttc
tgggctaatatacacttatcagtgtgtgcataccatgtgtgttctttttg
tgattgttccctcacttagggtgacattttctaggtccttccatttgcat
tgagaatttcataaattttattgttttaaataactgcgtactatcatgta
ccacattctattgggtacaatgtaccacatttttctgtatcaaatcttca
tttgggggatatcgggacttttcctgaatctgggctataataataagctg
ctagaacatatggagcatgtgtcctaatttcatgtaaagcatcttctggg
tataagcccgggagtggtactgctggtttcttagaagattatgtctaatt
ttctgaggaccagccaatgagat
gaattctttgttcaggtctgagtccctttttttaatgggaatatttgatt
ttctggagtccaacttcttgagttctttatatatattggatattagtccc
ctatctgatttaggataggtaaagatcctttgccaatctgttggtggtct
ttttgtctgattgacggtgtcttttgccttgcagaagcttagcaacttta
tgaggtccgacttattgattctcaaccttacagcacaagccattgatgtt
ctattcaggaatttacccctgtatccatattttctaggcttttccctact
ttctactctataagtttcagtgtctctggttttctgtggagatccttaat
tcacttagatttgaccttagtacaaggagataggaatgactcaattcgca
ttcttctacatgataactgccacttgtgccagcaccatttgttgaaaatg
ctgtctttttaccactgaatgggtttagcttcattgtcaaagatcaagtg
accataggtgtgcgagttcatctctgggtcttcaattctattccatttgt
ctacttctctgatgctataccagtaccatgcagtttctctcacaattgct
ctgtagtacagctttaggtcaggcatggtgattccaccagaggttctttt
atccttgagaagagtttttgctatcctaggttttttgttattccagatga
atttgccaattgccctttcttattcattgaagaattgagttggaattttg
atggggattgcattgaatctgtagattgcttttggaaagatagccatttt
tacaatgtggatcctgccaatccatgagcatgggagatcttccatcttct
gagatcttctttaattctttttcagagacttgaagtcttatcattacaga
actttcacttcctagttagagtcatgccaagtattttatatatatgtggc
tatgagaagtgtgttgcttccctaattctttctcagcttgtttatctttg
tgtagagaaggccattgacttgtttgagttgattttatattcagct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_79442395_79442946
seq2: B6Ng01-150N08.g_572_1113 (reverse)

seq1  AGCTGGATATAAAATTAACTCAAACAAGTCAATGGCCTTTCTCTACACAA  50
      ||||| ||||||||| ||||||||||||||||||||| ||||||||||||
seq2  AGCTGAATATAAAATCAACTCAAACAAGTCAATGGCC-TTCTCTACACAA  49

seq1  AGAATAAACAGGCTGAGAAAGAAATTAGGGAAACAACACCCTTCTCAATA  100
      || ||||||| |||||||||| |||||||||| |||||| |||||| |||
seq2  AG-ATAAACAAGCTGAGAAAG-AATTAGGGAAGCAACACACTTCTC-ATA  96

seq1  GCCACAAATAATATAAAATATCTCGGCGTGACTCTAACGAAGGAAGTGAA  150
      |||||| || |||||||||| || ||| ||||||||||  ||||||||||
seq2  GCCACATAT-ATATAAAATA-CTTGGCATGACTCTAAC-TAGGAAGTGAA  143

seq1  AGATCTGT-ATGATAAAAACTTCAAGTCCCTGAAGAAAGAAATTAAAGAA  199
      || ||||| ||||| || |||||||||| ||||| |||| ||||||||||
seq2  AGTTCTGTAATGAT-AAGACTTCAAGTCTCTGAA-AAAG-AATTAAAGAA  190

seq1  GATCTCAGAAGATGGAAAGATCTCCCATGCTCATGGATTGGCAGGACCAA  249
      ||||||||||||||| |||||||||||||||||||||||||||||| | |
seq2  GATCTCAGAAGATGG-AAGATCTCCCATGCTCATGGATTGGCAGGATCCA  239

seq1  CATTGTAAAAATGGCTATCTTGCCAAAAGCAATCTACAGATTCAATGCAA  299
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CATTGTAAAAATGGCTATCTTTCCAAAAGCAATCTACAGATTCAATGCAA  289

seq1  TCCCCATTAAAATTCCAACTCAATTCTTCAACGAATTAGAAGGAGCAATT  349
      ||||||| ||||||||||||||||||||||| |||| |||| | ||||||
seq2  TCCCCATCAAAATTCCAACTCAATTCTTCAATGAATAAGAAAGGGCAATT  339

seq1  TGCAAATTCATCTGGAATAACAAAAAACCGAGGATAGCAAAAACTCTTCT  399
       |||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GGCAAATTCATCTGGAATAACAAAAAACCTAGGATAGCAAAAACTCTTCT  389

seq1  CAAGGATAAAAGAACCTCTGGTGGAATCACCATGCCTGACCTAAAGCTTT  449
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CAAGGATAAAAGAACCTCTGGTGGAATCACCATGCCTGACCTAAAGCTGT  439

seq1  ACTACAGAGCAATTGTGATAAAAACTGCATGGTACTGGTATAGAGACAGA  499
      |||||||||||||||||| | ||||||||||||||||||||||   ||||
seq2  ACTACAGAGCAATTGTGAGAGAAACTGCATGGTACTGGTATAGCATCAGA  489

seq1  CAAGTGGACCAATGGAATAGAATTGAAGACCCAGAAATGAACCCACACAC  549
       |||| ||| ||||||||||||||||||||||||| |||||| | |||||
seq2  GAAGTAGACAAATGGAATAGAATTGAAGACCCAGAGATGAACTCGCACAC  539

seq1  CTA  552
      |||
seq2  CTA  542