BAC Information

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BAC

Clone NameB6Ng01-151G14
Chromosome3 (Build37)
Map Location 133,537,845 - 133,661,504
singlet/doubletdoublet
Overlap geneLOC100039168
Upstream geneNpnt, Gstcd, Ints12, 9130221D24Rik, Ppa2, E130014J05Rik, EG620205
Downstream geneLOC668862, LOC100039199, Cxxc4, Ppia-ps3_1390.1, LOC100039234, Tacr3, LOC229837
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-151G14.bB6Ng01-151G14.g
ACCDH947235DH947236
length1,1571,055
definitionDH947235|Mus musculus domesticus DNA, BAC clone: B6Ng01-151G14, 5' end.DH947236|Mus musculus domesticus DNA, BAC clone: B6Ng01-151G14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(133,660,329 - 133,661,504)(133,537,845 - 133,538,912)
sequence
gaattcttttcagaatttgaaacttcacataaaatttatcaaaagtcaag
ctaggtagaaaagcagattttggccaattggaagccatgaaaaactttaa
aaaaaaaaaagaaataaaatctacaggtccaaattgttttccattttcct
tctgccttttatttaaataggcagggggaaatttggatatacagtattct
gtttgtactgtttgatgtttcaagggccagaaaggggactctaactgaac
cccatcgcttacacccaagatccatatgggtgatcttgcctctccttttt
ctagagtagaaggcgtcagccatgccaggtcagagctctgggacaggtac
caaaattaactttccatgagggatggggaagaaaagagacaatgctttag
ggacctgtttggaatacaaaatgttcatggtgataatcagaactagaata
tggaggaattatcctcaggatcaagagtcaagacctttctaacaaatgtt
attttgcctgcgttggcaactgatagactttccaggtttgcactccctag
taaagtgcctactatgagtcaagcactattccaggagcaggatacatgta
aataaagagatgacccattatttgagaatctcatagcccatgatagaata
ttgtaaggtacgtgctgtaataaagacttagtggaggaaggggggctttt
aatctagcatcaggagaaagtttgggagtggattactagtaccatacaaa
caaagaccacatgtccatcgcttctccagcctcactaggcagcatgatac
ttgatccgtcataaattctcaatgacgttgtaattgtgctgagttctcta
gaatgagcaggagttataagggtggtgagatcaggaaatagcttgggaat
acaccttattgtggaagcttgtgtattattttgtggtggggaatttctag
gaattacaaagcagtgtagctatgactgaagcactgtgtatcagcagaag
tgaagccagagaatacagaacacgacttgaagatttttgcaggcacacaa
ggaaatataaacatttaagaaaataattaagatctttctagactgacagc
acaccatttccaatatatgttcgagtatggctatgacagacaggaagcgt
ctagtca
gaattctttttggtaattgctccttgatagtagaatgtttcttgactcta
gaaagaataaaacattttcaagacatatgattgggtttgccttgtcgctt
ttgaataaagtagttacaagcttaatttcctttgcattttcatgttggtg
agtataaatgaactaatttcatagtagaagatatcaaggtttcaaggtat
tatgtaatttgtctatggtaatatttatagaaaatgaaaaagtccagaca
caccctaagtaacattacttttgaaacacacgattcaaattacaatattt
aataaatccaattttttatgggtgaagcactattttggcaatgcctttgg
cgatagagctttcgactccctttccacaactgggtatttttagttaataa
atttcagcacaaattggaaataagacaagacgacctaccttctgcatcag
tttcttacagtcactaacttactagaaggtcggagcttctttttgaaaat
agaaaatgttgttatattggaaaaaccgccaatctaatcaccaaatacag
ctgttcacgtttccgtgagatgtgatgagaatgaagcttgaacatttgca
cttgacagcacacattttcagagcaattggatgcgctgaggagcgctgtg
aggagcaagcaccaaatggaggtgggctaaaagatcttggaatcttgttc
tggggtctggggtctcagatgcagcacccaccagcaacacagagagagtt
ttagcagctgcattgttttaacccagcccttaaagcaggaagccaaacct
cctttcttcacccttaaccacgtggctgaaactgtgtgactcatgcgctt
aatctcttggtcaggtattattcttctaggattcttaggaggaggccttc
agtagtgtaggttcctttgggttctgacctccttggggttaatgaccttt
tcagggggtcacagatcagatatagtgcctattagtgtttacatacactc
atatagtagcaaaactatagttagagtagcacaatatttttatggttggg
ggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_133660329_133661504
seq2: B6Ng01-151G14.b_43_1199 (reverse)

seq1  TGACTAGACAGCCTCTCCTTTGTCTTGTCATAGCCATACTCGAACATAAT  50
      ||||||||| || ||     |||| |||||||||||||||||||||| ||
seq2  TGACTAGAC-GCTTC----CTGTC-TGTCATAGCCATACTCGAACAT-AT  43

seq1  ATTGTGAAATGTTGTGCTGTTCAGTCTATGAAAGATCTTTAATATTTTTC  100
      |||| |||||| ||||||| |||||||| |||||||| |||||  |||||
seq2  ATTG-GAAATGGTGTGCTG-TCAGTCTA-GAAAGATC-TTAATTATTTTC  89

seq1  TAAAATGTTTATATTTCTTGTTGTTGGCCTGCAAAAATCTTCAAGTCGTG  150
      | |||||||||||||||   ||||  ||||||||||||||||||||||||
seq2  TTAAATGTTTATATTTC--CTTGTGTGCCTGCAAAAATCTTCAAGTCGTG  137

seq1  TTCTTGTATGTCCTTCTGGCTTCACTTCTGCTGATACACAGTGCTTCAGT  200
      ||| ||||| ||  ||||||||||||||||||||||||||||||||||||
seq2  TTC-TGTAT-TC--TCTGGCTTCACTTCTGCTGATACACAGTGCTTCAGT  183

seq1  CATAGCTACAACTTGCTTTGTAATTCCTAGAAATTCCCCACCACAAAATA  250
      ||||||||||   |||||||||||||||||||||||||||||||||||||
seq2  CATAGCTACA--CTGCTTTGTAATTCCTAGAAATTCCCCACCACAAAATA  231

seq1  ATACACAAGCTTCCACAATAAGGTGTATTCCCAAAGCTATTTCCTGATCT  300
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  ATACACAAGCTTCCACAATAAGGTGTATTCCC-AAGCTATTTCCTGATCT  280

seq1  CACCACCCTTATAACTCCTGCTCATTCTAGAGAACTCAGCACAATTACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACCCTTATAACTCCTGCTCATTCTAGAGAACTCAGCACAATTACAA  330

seq1  CGTCATTGAGAATTTATGACGGATCAAGTATCATGCTGCCTAGTGAGGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCATTGAGAATTTATGACGGATCAAGTATCATGCTGCCTAGTGAGGCT  380

seq1  GGAGAAGCGATGGACATGTGGTCTTTGTTTGTATGGTACTAGTAATCCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAAGCGATGGACATGTGGTCTTTGTTTGTATGGTACTAGTAATCCAC  430

seq1  TCCCAAACTTTCTCCTGATGCTAGATTAAAAG-CCCCCTTCCTCCACTAA  499
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TCCCAAACTTTCTCCTGATGCTAGATTAAAAGCCCCCCTTCCTCCACTAA  480

seq1  GTCTTTATTACAGCACGTACCTTACAATATTCTATCATGGGCTATGAGAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTATTACAGCACGTACCTTACAATATTCTATCATGGGCTATGAGAT  530

seq1  TCTCAAATAATGGGTCATCTCTTTATTTACATGTATCCTGCTCCTGGAAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAATAATGGGTCATCTCTTTATTTACATGTATCCTGCTCCTGGAAT  580

seq1  AGTGCTTGACTCATAGTAGGCACTTTACTAGGGAGTGCAAACCTGGAAAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTTGACTCATAGTAGGCACTTTACTAGGGAGTGCAAACCTGGAAAG  630

seq1  TCTATCAGTTGCCAACGCAGGCAAAATAACATTTGTTAGAAAGGTCTTGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATCAGTTGCCAACGCAGGCAAAATAACATTTGTTAGAAAGGTCTTGA  680

seq1  CTCTTGATCCTGAGGATAATTCCTCCATATTCTAGTTCTGATTATCACCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGATCCTGAGGATAATTCCTCCATATTCTAGTTCTGATTATCACCA  730

seq1  TGAACATTTTGTATTCCAAACAGGTCCCTAAAGCATTGTCTCTTTTCTTC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACATTTTGTATTCCAAACAGGTCCCTAAAGCATTGTCTCTTTTCTTC  780

seq1  CCCATCCCTCATGGAAAGTTAATTTTGGTACCTGTCCCAGAGCTCTGACC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATCCCTCATGGAAAGTTAATTTTGGTACCTGTCCCAGAGCTCTGACC  830

seq1  TGGCATGGCTGACGCCTTCTACTCTAGAAAAAGGAGAGGCAAGATCACCC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATGGCTGACGCCTTCTACTCTAGAAAAAGGAGAGGCAAGATCACCC  880

seq1  ATATGGATCTTGGGTGTAAGCGATGGGGTTCAGTTAGAGTCCCCTTTCTG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGGATCTTGGGTGTAAGCGATGGGGTTCAGTTAGAGTCCCCTTTCTG  930

seq1  GCCCTTGAAACATCAAACAGTACAAACAGAATACTGTATATCCAAATTTC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTTGAAACATCAAACAGTACAAACAGAATACTGTATATCCAAATTTC  980

seq1  CCCCTGCCTATTTAAATAAAAGGCAGAAGGAAAATGGAAAACAATTTGGA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTGCCTATTTAAATAAAAGGCAGAAGGAAAATGGAAAACAATTTGGA  1030

seq1  CCTGTAGATTTTATTTCTTTTTTTTTTTTAAAGTTTTTCATGGCTTCCAA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTAGATTTTATTTCTTTTTTTTTTTTAAAGTTTTTCATGGCTTCCAA  1080

seq1  TTGGCCAAAATCTGCTTTTCTACCTAGCTTGACTTTTGATAAATTTTATG  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCCAAAATCTGCTTTTCTACCTAGCTTGACTTTTGATAAATTTTATG  1130

seq1  TGAAGTTTCAAATTCTGAAAAGAATTC  1176
      |||||||||||||||||||||||||||
seq2  TGAAGTTTCAAATTCTGAAAAGAATTC  1157

seq1: chr3_133537845_133538912
seq2: B6Ng01-151G14.g_67_1121

seq1  GAATTCTTTTTGGTAATTGCTCCTTGATAGTAGAATGTTTCTTGACTCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTTGGTAATTGCTCCTTGATAGTAGAATGTTTCTTGACTCTA  50

seq1  GAAAGAATAAAACATTTTCAAGACATATGATTGGGTTTGCCTTGTCGCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAATAAAACATTTTCAAGACATATGATTGGGTTTGCCTTGTCGCTT  100

seq1  TTGAATAAAGTAGTTACAAGCTTAATTTCCTTTGCATTTTCATGTTGGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATAAAGTAGTTACAAGCTTAATTTCCTTTGCATTTTCATGTTGGTG  150

seq1  AGTATAAATGAACTAATTTCATAGTAGAAGATATCAAGGTTTCAAGGTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATAAATGAACTAATTTCATAGTAGAAGATATCAAGGTTTCAAGGTAT  200

seq1  TATGTAATTTGTCTATGGTAATATTTATAGAAAATGAAAAAGTCCAGACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTAATTTGTCTATGGTAATATTTATAGAAAATGAAAAAGTCCAGACA  250

seq1  CACCCTAAGTAACATTACTTTTGAAACACACGATTCAAATTACAATATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCTAAGTAACATTACTTTTGAAACACACGATTCAAATTACAATATTT  300

seq1  AATAAATCCAATTTTTTATGGGTGAAGCACTATTTTGGCAATGCCTTTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATCCAATTTTTTATGGGTGAAGCACTATTTTGGCAATGCCTTTGG  350

seq1  CGATAGAGCTTTCGACTCCCTTTCCACAACTGGGTATTTTTAGTTAATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATAGAGCTTTCGACTCCCTTTCCACAACTGGGTATTTTTAGTTAATAA  400

seq1  ATTTCAGCACAAATTGGAAATAAGACAAGACGACCTACCTTCTGCATCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAGCACAAATTGGAAATAAGACAAGACGACCTACCTTCTGCATCAG  450

seq1  TTTCTTACAGTCACTAACTTACTAGAAGGTCGGAGCTTCTTTTTGAAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTACAGTCACTAACTTACTAGAAGGTCGGAGCTTCTTTTTGAAAAT  500

seq1  AGAAAATGTTGTTATATTGGAAAAACCGCCAATCTAATCACCAAATACAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATGTTGTTATATTGGAAAAACCGCCAATCTAATCACCAAATACAG  550

seq1  CTGTTCACGTTTCCGTGAGATGTGATGAGAATGAAGCTTGAACATTTGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCACGTTTCCGTGAGATGTGATGAGAATGAAGCTTGAACATTTGCA  600

seq1  CTTGACAGCACACATTTTCAGAGCAATTGGATGCGCTGAGGAGCGCTGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGACAGCACACATTTTCAGAGCAATTGGATGCGCTGAGGAGCGCTGTG  650

seq1  AGGAGCAAGCACCAAATGGAGGTGGGCTAAAAGATCTTGGAATCTTGTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGCAAGCACCAAATGGAGGTGGGCTAAAAGATCTTGGAATCTTGTTC  700

seq1  TGGGGTCTGGGGTCTCAGATGCAGCACCCACCAGCAACACAGAGAGAGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGTCTGGGGTCTCAGATGCAGCACCCACCAGCAACACAGAGAGAGTT  750

seq1  TTAGCAGCTGCATTGTTTTAACCCAGCCCTTAAAGCAGGAAGCCAAACCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCAGCTGCATTGTTTTAACCCAGCCCTTAAAGCAGGAAGCCAAACCT  800

seq1  CCTTTCTTCACCCTTAACCACGTGGCTGAAAACTGTGTGACTCATGCGCT  850
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CCTTTCTTCACCCTTAACCACGTGGCTG-AAACTGTGTGACTCATGCGCT  849

seq1  TAATCTCTTGGTCAGGTATTATTCTTCTAGGAATTCTTAGGAGGAGGCCT  900
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TAATCTCTTGGTCAGGTATTATTCTTCTAGG-ATTCTTAGGAGGAGGCCT  898

seq1  TCAGTAGTGTAGGTTCCTTTGGGTTCTGACCTCCTTGGGGTTAAATGACC  950
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TCAGTAGTGTAGGTTCCTTTGGGTTCTGACCTCCTTGGGGTT-AATGACC  947

seq1  TTTTCAGGGGGGTCACAGATCAGATATAGTGCCTATTAGGTGTTTACATT  1000
      |||||| ||||||||||||||||||||||||||||||| ||||||||| |
seq2  TTTTCA-GGGGGTCACAGATCAGATATAGTGCCTATTA-GTGTTTACA-T  994

seq1  ACAACTCATAATAGTAGCAAAACTATAGTTAAGAAGTAGCAACAAAATAT  1050
      || |||||| |||||||||||||||||||||   |||||   || |||||
seq2  AC-ACTCAT-ATAGTAGCAAAACTATAGTTA--GAGTAG---CACAATAT  1037

seq1  TTTTATGGTTGGGGGGGG  1068
      ||||||||||||||||||
seq2  TTTTATGGTTGGGGGGGG  1055