BAC Information

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BAC

Clone NameB6Ng01-151K14
Chromosome3 (Build37)3 (Build37)
Map Location 41,059,227 - 41,059,39745,542,044 - 45,543,279
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100040882, Intu, Slc25a31, Hspa4l, Plk4, Mfsd8, LOC100039027, LOC100039043, 3110057O12Rik, 1700034I23Rik, Larp2, Pgrmc2
Downstream geneEG666004, Ppia-ps3_337.1, LOC100039115, Phf17, Sclt1, D3Ertd751e, LOC666031
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-151K14.bB6Ng01-151K14.g
ACCDH947426DH947427
length7631,227
definitionDH947426|Mus musculus domesticus DNA, BAC clone: B6Ng01-151K14, 5' end.DH947427|Mus musculus domesticus DNA, BAC clone: B6Ng01-151K14, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(41,059,227 - 41,059,397)(45,542,044 - 45,543,279)
sequence
gaattccttgatccacttagatttggccctaatacaaggagataggaatg
gatcaattcacattcttctacatgttaaccaccagttgtgccaccatcat
ttgttgaaaatgctgtcttttttccactggatggttttagttcccttatc
aaagatcaagtgaccataggtgtgcggtgtgggaagccacatgtgccatt
gcagggaggcactggctaccactggccaccacccatgaatttgggtaaac
aaccaatgtgcgcatgtgcataagagttttttgccgagtcactgcctggc
ctgacgcatattaatgaggtactggtagcataactaatcaggtatggaca
tgtcactcctaggcctatataagcaacaccatgtctgggctctgggtctt
actcttcatgctgaaactagcataataaagcattgctgcagaaggatccg
gttgtctgcgtgtgttcttgctggtgagaagatagtgcacgcaagaagtg
gcgccaaaaactgggaatgccttaccatcgctggcgctgaggagaccctc
cgtttgcggtgtggattcagaactgcagccaggttagtttttcaaggtaa
gcgctgagaggcatgtttgtttctggcctttctccacaactagaataggc
agtggacgccttcgtaattgttcttgtggcacttatccttttccttatag
tgaaagcaggacagggagtgctggaggaggttcaagacagcatgtcagaa
acagagcaggata
gaattctctctagtatgctgcagttttagcaataacaagtgatctaaacc
catggttatcttaaatttgcaattaatatattgaagaaaggacacttctc
agaggttgttatcatctaaacctctgaacaaggctagaggaaggctaaac
ttattattagttgtcaacatggggatagacactgaaagattctacctacg
tttgagacacactactataaggaagtctatctatttaccaatacaaacac
acttgtttaattctatatcccattaataccagaaaaagagcaaggtagga
ccaaagcccacacagataaatgacttaaattgaccaagactgttatcaaa
aacctatgtctattagtttagtcttttattgttgtgataaaataccatac
ctagaagcaatttatagataggagaatttatctgggcttatcatcttaga
gtaataaggagcagtcaccatcttgctggggaagtggaaaagctggcagg
caaggcaactggagcagcaacctgaaagttcacataatacattgtaaaca
ggaagcatgtatagcgagaacttgagtggctttgaaacctccaagtctgc
gcccagtggcttatatcttccaggaaggccactcctcataggtctacccc
aattgctccagcaagtagagatcaagtattcaaacatctgagtctatatg
ggtcatgaattcaagtgacttattccatccccttgttcccacaaacctga
tgacaaatccaaatgcaaatcagatttactccaacatcacaatactcata
gtctttctatctgtgaaaaagtccagaagctctttctaagactcaagaaa
atatcgtatctataagcccctgttaaattaaaaaaaaaaaaaaagaaatt
ccatatttccaatatagactgccacagtgctgagttaactgctatgttcg
gtcctctgggagtttctacaggttttgcagcctggagtcaatagtattgc
tggacgactcatttcctggcattgataaatgtgtattgtggggaagatat
ttatgctgtagtagagaagcagccgaagccactaattcttcattactaag
gaagatttggtttcctgggtgaatgcgttctaagactctctcttgattcc
tagcctttggtatgccatgcgtccacctaaggatgtgctttgagaacata
tttgttgacccctcacacattttacta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_41059227_41059397
seq2: B6Ng01-151K14.b_51_221 (reverse)

seq1  CACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCAGTG  50
      ||||||||||||||||||||||| || |||||| ||||||||||||||||
seq2  CACACCTATGGTCACTTGATCTTTGATAAGGGAACTAAAACCATCCAGTG  50

seq1  GAAAAAAGACAGCATTTTCAACAAATGGTGCTGGCACAACTGGTTGTTAT  100
      ||||||||||||||||||||||||||| || ||||||||||||| |||| 
seq2  GAAAAAAGACAGCATTTTCAACAAATGATGGTGGCACAACTGGTGGTTAA  100

seq1  CATGTAGAAGAATGCGAATTGATCCACTCCTATCTCCTTGTACTAAGGTC  150
      |||||||||||||| ||||||||||| ||||||||||||||| || || |
seq2  CATGTAGAAGAATGTGAATTGATCCATTCCTATCTCCTTGTATTAGGGCC  150

seq1  AAATCTAAGTGGATCAAGGAA  171
      |||||||||||||||||||||
seq2  AAATCTAAGTGGATCAAGGAA  171

seq1: chr3_45542044_45543279
seq2: B6Ng01-151K14.g_69_1295

seq1  GAATTCTCTCTAGTATGCTGCAGTTTTAGCAATAACAAGTGATCTAAACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCTAGTATGCTGCAGTTTTAGCAATAACAAGTGATCTAAACC  50

seq1  CATGGTTATCTTAAATTTGCAATTAATATATTGAAGAAAGGACACTTCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGTTATCTTAAATTTGCAATTAATATATTGAAGAAAGGACACTTCTC  100

seq1  AGAGGTTGTTATCATCTAAACCTCTGAACAAGGCTAGAGGAAGGCTAAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTTGTTATCATCTAAACCTCTGAACAAGGCTAGAGGAAGGCTAAAC  150

seq1  TTATTATTAGTTGTCAACATGGGGATAGACACTGAAAGATTCTACCTACG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTATTAGTTGTCAACATGGGGATAGACACTGAAAGATTCTACCTACG  200

seq1  TTTGAGACACACTACTATAAGGAAGTCTATCTATTTACCAATACAAACAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGACACACTACTATAAGGAAGTCTATCTATTTACCAATACAAACAC  250

seq1  ACTTGTTTAATTCTATATCCCATTAATACCAGAAAAAGAGCAAGGTAGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTTTAATTCTATATCCCATTAATACCAGAAAAAGAGCAAGGTAGGA  300

seq1  CCAAAGCCCACACAGATAAATGACTTAAATTGACCAAGACTGTTATCAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGCCCACACAGATAAATGACTTAAATTGACCAAGACTGTTATCAAA  350

seq1  AACCTATGTCTATTAGTTTAGTCTTTTATTGTTGTGATAAAATACCATAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTATGTCTATTAGTTTAGTCTTTTATTGTTGTGATAAAATACCATAC  400

seq1  CTAGAAGCAATTTATAGATAGGAGAATTTATCTGGGCTTATCATCTTAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAAGCAATTTATAGATAGGAGAATTTATCTGGGCTTATCATCTTAGA  450

seq1  GTAATAAGGAGCAGTCACCATCTTGCTGGGGAAGTGGAAAAGCTGGCAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATAAGGAGCAGTCACCATCTTGCTGGGGAAGTGGAAAAGCTGGCAGG  500

seq1  CAAGGCAACTGGAGCAGCAACCTGAAAGTTCACATAATACATTGTAAACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCAACTGGAGCAGCAACCTGAAAGTTCACATAATACATTGTAAACA  550

seq1  GGAAGCATGTATAGCGAGAACTTGAGTGGCTTTGAAACCTCCAAGTCTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGCATGTATAGCGAGAACTTGAGTGGCTTTGAAACCTCCAAGTCTGC  600

seq1  GCCCAGTGGCTTATATCTTCCAGGAAGGCCACTCCTCATAGGTCTACCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAGTGGCTTATATCTTCCAGGAAGGCCACTCCTCATAGGTCTACCCC  650

seq1  AATTGCTCCAGCAAGTAGAGATCAAGTATTCAAACATCTGAGTCTATATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGCTCCAGCAAGTAGAGATCAAGTATTCAAACATCTGAGTCTATATG  700

seq1  GGTCATGAATTCAAGTGACTTATTCCATCCCCTTGTTCCCACAAACCTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCATGAATTCAAGTGACTTATTCCATCCCCTTGTTCCCACAAACCTGA  750

seq1  TGACAAATCCAAATGCAAATCAGATTTACTCCAACATCACAATACTCATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAAATCCAAATGCAAATCAGATTTACTCCAACATCACAATACTCATA  800

seq1  GTCTTTCTATCTGTGAAAAAGTCCAGAAGCTC-TTCTAAGACTCAAGAAA  849
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GTCTTTCTATCTGTGAAAAAGTCCAGAAGCTCTTTCTAAGACTCAAGAAA  850

seq1  ATATCGTATCTATAAGCCCCTGTTAAATT-AAAAAAAAAAAAAAGAAATT  898
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  ATATCGTATCTATAAGCCCCTGTTAAATTAAAAAAAAAAAAAAAGAAATT  900

seq1  CCATATTTCCAATATAGACTGCCACAGTGCTGAGTTAACTGCTATGTTCG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATATTTCCAATATAGACTGCCACAGTGCTGAGTTAACTGCTATGTTCG  950

seq1  GTCCTCTGGGAGTTTTCTACAGGTTTTGCAGCCT-GAGTCAATAGTATTG  997
      |||||||||||| ||||||||||||||||||||| |||||||||||||||
seq2  GTCCTCTGGGAG-TTTCTACAGGTTTTGCAGCCTGGAGTCAATAGTATTG  999

seq1  CTGGAACGACTCATTTCCTGGCCATTGATAAAAATGTGTATTGTTGGGGA  1047
      |||| |||||||||||||||| |||||||  |||||||||||| ||||||
seq2  CTGG-ACGACTCATTTCCTGG-CATTGAT--AAATGTGTATTG-TGGGGA  1044

seq1  AGATATTTATGCTGTAGTAGAGAAGCAGCCGAAG-CACTAATTC-TCATT  1095
      |||||||||||||||||||||||||||||||||| ||||||||| |||||
seq2  AGATATTTATGCTGTAGTAGAGAAGCAGCCGAAGCCACTAATTCTTCATT  1094

seq1  ACTAAGAAGTGAGTTTGTTTCCTTGGTGCCATAGCTGTTCTAGAGACTCT  1145
      |||||| |  || || ||||||| ||||  |  || |||||| |||||||
seq2  ACTAAGGA-AGATTTGGTTTCCTGGGTG--AATGC-GTTCTA-AGACTCT  1139

seq1  CTCTGTGAATCCTAGCCTTGGGATAGCTATGCTGTCCAAACTTAGATGAT  1195
      |||| ||| |||||||||| ||   || |||| ||||  || || | |||
seq2  CTCT-TGATTCCTAGCCTTTGGTATGCCATGC-GTCC--ACCTA-AGGAT  1184

seq1  GTGTATTATAGACTAT-TTTGTTGA-CCCTCACA-ACTTTACTA  1236
      |||  ||  |||  || |||||||| |||||||| | |||||||
seq2  GTG-CTTTGAGAACATATTTGTTGACCCCTCACACATTTTACTA  1227